Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.94□□□□□ -1.78
CUEDC1Q9NWM3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CUEDC1Q9NWM3 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.94□□□□□ -1.78
CUEDC1Q9NWM3 Y_RNA.111-201ENST00000363248 100 ntBASIC3.94□□□□□ -1.78
CUEDC1Q9NWM3 RNU6-1083P-201ENST00000384022 107 ntBASIC3.94□□□□□ -1.78
CUEDC1Q9NWM3 SNORD78.1-201ENST00000390866 65 ntBASIC3.94□□□□□ -1.78
CUEDC1Q9NWM3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.94□□□□□ -1.78
CUEDC1Q9NWM3 RPL36AP48-201ENST00000485521 314 ntBASIC3.94□□□□□ -1.78
CUEDC1Q9NWM3 SEM1P1-201ENST00000506694 209 ntBASIC3.94□□□□□ -1.78
CUEDC1Q9NWM3 AC010598.1-201ENST00000510378 103 ntBASIC3.94□□□□□ -1.78
CUEDC1Q9NWM3 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.94□□□□□ -1.78
CUEDC1Q9NWM3 RNU6-1146P-201ENST00000516282 102 ntBASIC3.94□□□□□ -1.78
CUEDC1Q9NWM3 MIR4765-201ENST00000585007 77 ntBASIC3.94□□□□□ -1.78
CUEDC1Q9NWM3 AC012493.2-201ENST00000595083 291 ntBASIC3.94□□□□□ -1.78
CUEDC1Q9NWM3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CUEDC1Q9NWM3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.94□□□□□ -1.78
CUEDC1Q9NWM3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CUEDC1Q9NWM3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CUEDC1Q9NWM3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CUEDC1Q9NWM3 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.93□□□□□ -1.78
CUEDC1Q9NWM3 SNORD35B-201ENST00000363660 87 ntBASIC3.93□□□□□ -1.78
CUEDC1Q9NWM3 MIR29B2-201ENST00000385055 81 ntBASIC3.93□□□□□ -1.78
CUEDC1Q9NWM3 Z98742.2-201ENST00000431564 187 ntBASIC3.93□□□□□ -1.78
CUEDC1Q9NWM3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.93□□□□□ -1.78
CUEDC1Q9NWM3 AC006483.1-201ENST00000487308 313 ntBASIC3.93□□□□□ -1.78
CUEDC1Q9NWM3 RPL29P14-201ENST00000495837 428 ntBASIC3.93□□□□□ -1.78
CUEDC1Q9NWM3 RNA5SP236-201ENST00000516169 116 ntBASIC3.93□□□□□ -1.78
CUEDC1Q9NWM3 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.93□□□□□ -1.78
CUEDC1Q9NWM3 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.93□□□□□ -1.78
CUEDC1Q9NWM3 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
CUEDC1Q9NWM3 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CUEDC1Q9NWM3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.93□□□□□ -1.78
CUEDC1Q9NWM3 FAM35DP-201ENST00000323387 2712 ntBASIC3.93□□□□□ -1.78
CUEDC1Q9NWM3 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CUEDC1Q9NWM3 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.92□□□□□ -1.78
CUEDC1Q9NWM3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CUEDC1Q9NWM3 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CUEDC1Q9NWM3 AL356292.1-201ENST00000283110 373 ntBASIC3.92□□□□□ -1.78
CUEDC1Q9NWM3 RNU6-1210P-201ENST00000363775 107 ntBASIC3.92□□□□□ -1.78
CUEDC1Q9NWM3 SNORA51.4-201ENST00000364993 124 ntBASIC3.92□□□□□ -1.78
CUEDC1Q9NWM3 RNU6-1138P-201ENST00000365359 106 ntBASIC3.92□□□□□ -1.78
CUEDC1Q9NWM3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.92□□□□□ -1.78
CUEDC1Q9NWM3 AC112771.1-201ENST00000463581 102 ntBASIC3.92□□□□□ -1.78
CUEDC1Q9NWM3 HMGN2P9-201ENST00000476875 229 ntBASIC3.92□□□□□ -1.78
CUEDC1Q9NWM3 AC021205.2-201ENST00000480069 347 ntBASIC3.92□□□□□ -1.78
CUEDC1Q9NWM3 AC134878.1-201ENST00000619901 243 ntBASIC3.92□□□□□ -1.78
CUEDC1Q9NWM3 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.92□□□□□ -1.78
CUEDC1Q9NWM3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CUEDC1Q9NWM3 GABRG2-229ENST00000641017 3628 ntBASIC3.92□□□□□ -1.78
CUEDC1Q9NWM3 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CUEDC1Q9NWM3 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.92□□□□□ -1.78
CUEDC1Q9NWM3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CUEDC1Q9NWM3 ZNF962P-201ENST00000443465 3140 ntBASIC3.91□□□□□ -1.78
CUEDC1Q9NWM3 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.91□□□□□ -1.78
CUEDC1Q9NWM3 Y_RNA.78-201ENST00000362970 110 ntBASIC3.91□□□□□ -1.78
CUEDC1Q9NWM3 SNORD21-201ENST00000383953 95 ntBASIC3.91□□□□□ -1.78
CUEDC1Q9NWM3 SNORA9-201ENST00000384215 133 ntBASIC3.91□□□□□ -1.78
CUEDC1Q9NWM3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.91□□□□□ -1.78
CUEDC1Q9NWM3 AL353705.1-201ENST00000433468 480 ntBASIC3.91□□□□□ -1.78
CUEDC1Q9NWM3 MIR2114-201ENST00000516645 80 ntBASIC3.91□□□□□ -1.78
CUEDC1Q9NWM3 RNU6-365P-201ENST00000517113 106 ntBASIC3.91□□□□□ -1.78
CUEDC1Q9NWM3 HSPE1P18-201ENST00000517602 280 ntBASIC3.91□□□□□ -1.78
CUEDC1Q9NWM3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.91□□□□□ -1.78
CUEDC1Q9NWM3 AC025627.2-201ENST00000576220 160 ntBASIC3.91□□□□□ -1.78
CUEDC1Q9NWM3 RN7SL703P-201ENST00000578485 302 ntBASIC3.91□□□□□ -1.78
CUEDC1Q9NWM3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.91□□□□□ -1.78
CUEDC1Q9NWM3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.91□□□□□ -1.78
CUEDC1Q9NWM3 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.91□□□□□ -1.78
CUEDC1Q9NWM3 AL136360.1-201ENST00000503377 1900 ntBASIC3.91□□□□□ -1.78
CUEDC1Q9NWM3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
CUEDC1Q9NWM3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CUEDC1Q9NWM3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
CUEDC1Q9NWM3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.9□□□□□ -1.78
CUEDC1Q9NWM3 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CUEDC1Q9NWM3 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.9□□□□□ -1.78
CUEDC1Q9NWM3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CUEDC1Q9NWM3 SNORA60-201ENST00000362396 134 ntBASIC3.9□□□□□ -1.79
CUEDC1Q9NWM3 RNU4-13P-201ENST00000364019 141 ntBASIC3.9□□□□□ -1.79
CUEDC1Q9NWM3 Y_RNA.203-201ENST00000364106 102 ntBASIC3.9□□□□□ -1.79
CUEDC1Q9NWM3 SNORA48.8-201ENST00000391324 134 ntBASIC3.9□□□□□ -1.79
CUEDC1Q9NWM3 AL139095.1-201ENST00000404326 391 ntBASIC3.9□□□□□ -1.79
CUEDC1Q9NWM3 RPL21P65-201ENST00000406094 466 ntBASIC3.9□□□□□ -1.79
CUEDC1Q9NWM3 RPS29P7-201ENST00000439662 171 ntBASIC3.9□□□□□ -1.79
CUEDC1Q9NWM3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.9□□□□□ -1.79
CUEDC1Q9NWM3 AC010531.2-201ENST00000465012 153 ntBASIC3.9□□□□□ -1.79
CUEDC1Q9NWM3 RNA5SP20-201ENST00000515976 84 ntBASIC3.9□□□□□ -1.79
CUEDC1Q9NWM3 SCARNA17.1-201ENST00000516211 143 ntBASIC3.9□□□□□ -1.79
CUEDC1Q9NWM3 SCARNA17.2-201ENST00000516334 143 ntBASIC3.9□□□□□ -1.79
CUEDC1Q9NWM3 AC007751.1-201ENST00000529260 376 ntBASIC3.9□□□□□ -1.79
CUEDC1Q9NWM3 RPL23AP91-201ENST00000569211 455 ntBASIC3.9□□□□□ -1.79
CUEDC1Q9NWM3 MIR6868-201ENST00000611215 58 ntBASIC3.9□□□□□ -1.79
CUEDC1Q9NWM3 AC019176.2-201ENST00000611579 315 ntBASIC3.9□□□□□ -1.79
CUEDC1Q9NWM3 SCARNA17.4-201ENST00000614296 143 ntBASIC3.9□□□□□ -1.79
CUEDC1Q9NWM3 SNORA50A-202ENST00000629536 136 ntBASIC3.9□□□□□ -1.79
CUEDC1Q9NWM3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CUEDC1Q9NWM3 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CUEDC1Q9NWM3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CUEDC1Q9NWM3 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CUEDC1Q9NWM3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.89□□□□□ -1.79
CUEDC1Q9NWM3 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 204 ms