Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 RNU6-17P-201ENST00000384245 107 ntBASIC2.17□□□□□ -2.06
SMC4Q9NTJ3 RNU6-18P-201ENST00000384527 107 ntBASIC2.17□□□□□ -2.06
SMC4Q9NTJ3 AL627390.1-201ENST00000396055 340 ntBASIC2.17□□□□□ -2.06
SMC4Q9NTJ3 RN7SKP210-201ENST00000459176 261 ntBASIC2.17□□□□□ -2.06
SMC4Q9NTJ3 RRN3P3-201ENST00000549207 578 ntBASIC2.17□□□□□ -2.06
SMC4Q9NTJ3 AC025253.1-201ENST00000613623 543 ntBASIC2.17□□□□□ -2.06
SMC4Q9NTJ3 Y_RNA.804-201ENST00000615262 101 ntBASIC2.17□□□□□ -2.06
SMC4Q9NTJ3 PISRT1.1-201ENST00000616930 107 ntBASIC2.17□□□□□ -2.06
SMC4Q9NTJ3 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.17□□□□□ -2.06
SMC4Q9NTJ3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.16□□□□□ -2.06
SMC4Q9NTJ3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SMC4Q9NTJ3 RNU6-222P-201ENST00000362438 107 ntBASIC2.16□□□□□ -2.06
SMC4Q9NTJ3 Y_RNA.58-201ENST00000362807 102 ntBASIC2.16□□□□□ -2.06
SMC4Q9NTJ3 RNY1P16-201ENST00000363063 111 ntBASIC2.16□□□□□ -2.06
SMC4Q9NTJ3 Y_RNA.154-201ENST00000363624 102 ntBASIC2.16□□□□□ -2.06
SMC4Q9NTJ3 Y_RNA.263-201ENST00000364659 114 ntBASIC2.16□□□□□ -2.06
SMC4Q9NTJ3 RNY3P1-201ENST00000365085 102 ntBASIC2.16□□□□□ -2.06
SMC4Q9NTJ3 Y_RNA.319-201ENST00000365138 92 ntBASIC2.16□□□□□ -2.06
SMC4Q9NTJ3 RNY3-201ENST00000365484 102 ntBASIC2.16□□□□□ -2.06
SMC4Q9NTJ3 RNU6-975P-201ENST00000384296 105 ntBASIC2.16□□□□□ -2.06
SMC4Q9NTJ3 RNU6-1235P-201ENST00000384559 107 ntBASIC2.16□□□□□ -2.06
SMC4Q9NTJ3 RNU6-1009P-201ENST00000390996 107 ntBASIC2.16□□□□□ -2.06
SMC4Q9NTJ3 RNA5SP100-201ENST00000410903 110 ntBASIC2.16□□□□□ -2.06
SMC4Q9NTJ3 RNA5SP59-201ENST00000410922 110 ntBASIC2.16□□□□□ -2.06
SMC4Q9NTJ3 USMG5P1-201ENST00000425964 177 ntBASIC2.16□□□□□ -2.06
SMC4Q9NTJ3 ATP5J2P3-201ENST00000451550 258 ntBASIC2.16□□□□□ -2.06
SMC4Q9NTJ3 RNU6-498P-201ENST00000459468 107 ntBASIC2.16□□□□□ -2.06
SMC4Q9NTJ3 AP000870.1-201ENST00000472927 406 ntBASIC2.16□□□□□ -2.06
SMC4Q9NTJ3 HMGN2P9-201ENST00000476875 229 ntBASIC2.16□□□□□ -2.06
SMC4Q9NTJ3 FGF7P4-201ENST00000509595 295 ntBASIC2.16□□□□□ -2.06
SMC4Q9NTJ3 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.16□□□□□ -2.06
SMC4Q9NTJ3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.16□□□□□ -2.06
SMC4Q9NTJ3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.16□□□□□ -2.06
SMC4Q9NTJ3 SUB1P4-201ENST00000566062 339 ntBASIC2.16□□□□□ -2.06
SMC4Q9NTJ3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SMC4Q9NTJ3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.16□□□□□ -2.06
SMC4Q9NTJ3 AL353149.1-201ENST00000610667 244 ntBASIC2.16□□□□□ -2.06
SMC4Q9NTJ3 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.16□□□□□ -2.06
SMC4Q9NTJ3 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.16□□□□□ -2.06
SMC4Q9NTJ3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
SMC4Q9NTJ3 AL159152.1-201ENST00000635019 2587 ntBASIC2.15□□□□□ -2.06
SMC4Q9NTJ3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
SMC4Q9NTJ3 RNU5F-3P-201ENST00000363767 117 ntBASIC2.15□□□□□ -2.07
SMC4Q9NTJ3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
SMC4Q9NTJ3 AC074290.1-201ENST00000448883 135 ntBASIC2.15□□□□□ -2.07
SMC4Q9NTJ3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.15□□□□□ -2.07
SMC4Q9NTJ3 U8.22-201ENST00000459141 133 ntBASIC2.15□□□□□ -2.07
SMC4Q9NTJ3 AC097473.1-201ENST00000508142 408 ntBASIC2.15□□□□□ -2.07
SMC4Q9NTJ3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.15□□□□□ -2.07
SMC4Q9NTJ3 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.15□□□□□ -2.07
SMC4Q9NTJ3 RNU6-948P-201ENST00000516374 107 ntBASIC2.15□□□□□ -2.07
SMC4Q9NTJ3 Y_RNA.676-201ENST00000516393 96 ntBASIC2.15□□□□□ -2.07
SMC4Q9NTJ3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.15□□□□□ -2.07
SMC4Q9NTJ3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.15□□□□□ -2.07
SMC4Q9NTJ3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
SMC4Q9NTJ3 Y_RNA.67-201ENST00000362870 100 ntBASIC2.14□□□□□ -2.07
SMC4Q9NTJ3 Y_RNA.106-201ENST00000363189 100 ntBASIC2.14□□□□□ -2.07
SMC4Q9NTJ3 SNORA67.2-201ENST00000384300 149 ntBASIC2.14□□□□□ -2.07
SMC4Q9NTJ3 NCOR1P3-201ENST00000420479 303 ntBASIC2.14□□□□□ -2.07
SMC4Q9NTJ3 MTND3P23-201ENST00000431980 347 ntBASIC2.14□□□□□ -2.07
SMC4Q9NTJ3 AC093019.1-201ENST00000443135 252 ntBASIC2.14□□□□□ -2.07
SMC4Q9NTJ3 RPL30P15-201ENST00000457129 321 ntBASIC2.14□□□□□ -2.07
SMC4Q9NTJ3 Y_RNA.632-201ENST00000459189 102 ntBASIC2.14□□□□□ -2.07
SMC4Q9NTJ3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.14□□□□□ -2.07
SMC4Q9NTJ3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.14□□□□□ -2.07
SMC4Q9NTJ3 RNU7-175P-201ENST00000515915 61 ntBASIC2.14□□□□□ -2.07
SMC4Q9NTJ3 RNU1-62P-201ENST00000362599 164 ntBASIC2.13□□□□□ -2.07
SMC4Q9NTJ3 RNU6-873P-201ENST00000363833 107 ntBASIC2.13□□□□□ -2.07
SMC4Q9NTJ3 RNU6-99P-201ENST00000364721 107 ntBASIC2.13□□□□□ -2.07
SMC4Q9NTJ3 Y_RNA.387-201ENST00000383918 102 ntBASIC2.13□□□□□ -2.07
SMC4Q9NTJ3 RNU6-890P-201ENST00000384121 107 ntBASIC2.13□□□□□ -2.07
SMC4Q9NTJ3 RNU6-159P-201ENST00000391080 106 ntBASIC2.13□□□□□ -2.07
SMC4Q9NTJ3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.13□□□□□ -2.07
SMC4Q9NTJ3 AC112492.4-201ENST00000456549 352 ntBASIC2.13□□□□□ -2.07
SMC4Q9NTJ3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.13□□□□□ -2.07
SMC4Q9NTJ3 SNORA25.15-201ENST00000516487 89 ntBASIC2.13□□□□□ -2.07
SMC4Q9NTJ3 Y_RNA.718-201ENST00000517110 102 ntBASIC2.13□□□□□ -2.07
SMC4Q9NTJ3 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.13□□□□□ -2.07
SMC4Q9NTJ3 RAB11AP2-201ENST00000545905 639 ntBASIC2.13□□□□□ -2.07
SMC4Q9NTJ3 SNORD11B-201ENST00000607707 90 ntBASIC2.13□□□□□ -2.07
SMC4Q9NTJ3 AC083806.3-201ENST00000614016 455 ntBASIC2.13□□□□□ -2.07
SMC4Q9NTJ3 AC084781.2-201ENST00000615568 161 ntBASIC2.13□□□□□ -2.07
SMC4Q9NTJ3 RNU6-418P-201ENST00000384035 107 ntBASIC2.12□□□□□ -2.07
SMC4Q9NTJ3 MIR10B-201ENST00000385011 110 ntBASIC2.12□□□□□ -2.07
SMC4Q9NTJ3 RNA5SP213-201ENST00000391031 106 ntBASIC2.12□□□□□ -2.07
SMC4Q9NTJ3 RNA5SP504-201ENST00000410676 117 ntBASIC2.12□□□□□ -2.07
SMC4Q9NTJ3 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.12□□□□□ -2.07
SMC4Q9NTJ3 RPL23AP50-201ENST00000434149 455 ntBASIC2.12□□□□□ -2.07
SMC4Q9NTJ3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.12□□□□□ -2.07
SMC4Q9NTJ3 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.12□□□□□ -2.07
SMC4Q9NTJ3 RNA5SP57-201ENST00000459463 123 ntBASIC2.12□□□□□ -2.07
SMC4Q9NTJ3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.12□□□□□ -2.07
SMC4Q9NTJ3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.12□□□□□ -2.07
SMC4Q9NTJ3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.12□□□□□ -2.07
SMC4Q9NTJ3 MIR5690-201ENST00000583739 73 ntBASIC2.12□□□□□ -2.07
SMC4Q9NTJ3 MIR4795-201ENST00000584182 89 ntBASIC2.12□□□□□ -2.07
SMC4Q9NTJ3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.12□□□□□ -2.07
SMC4Q9NTJ3 LARP7P1-201ENST00000605576 316 ntBASIC2.12□□□□□ -2.07
SMC4Q9NTJ3 MIR502-201ENST00000606349 86 ntBASIC2.12□□□□□ -2.07
SMC4Q9NTJ3 AC103810.8-201ENST00000607347 118 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 192.4 ms