Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 RNU6-181P-201ENST00000363225 107 ntBASIC0.05□□□□□ -2.4
CDC42SE1Q9NRR8 RNU6-1329P-201ENST00000365664 107 ntBASIC0.05□□□□□ -2.4
CDC42SE1Q9NRR8 Y_RNA.415-201ENST00000384012 112 ntBASIC0.05□□□□□ -2.4
CDC42SE1Q9NRR8 RNU6-793P-201ENST00000384233 104 ntBASIC0.05□□□□□ -2.4
CDC42SE1Q9NRR8 RNU6-297P-201ENST00000384636 107 ntBASIC0.05□□□□□ -2.4
CDC42SE1Q9NRR8 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.05□□□□□ -2.4
CDC42SE1Q9NRR8 MIR1302-7-201ENST00000408841 72 ntBASIC0.05□□□□□ -2.4
CDC42SE1Q9NRR8 HMGN1P14-201ENST00000412459 517 ntBASIC0.05□□□□□ -2.4
CDC42SE1Q9NRR8 MTCO3P19-201ENST00000415864 321 ntBASIC0.05□□□□□ -2.4
CDC42SE1Q9NRR8 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.05□□□□□ -2.4
CDC42SE1Q9NRR8 AL513124.1-201ENST00000450410 614 ntBASIC0.05□□□□□ -2.4
CDC42SE1Q9NRR8 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
CDC42SE1Q9NRR8 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.05□□□□□ -2.4
CDC42SE1Q9NRR8 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.05□□□□□ -2.4
CDC42SE1Q9NRR8 U8.21-201ENST00000459536 136 ntBASIC0.05□□□□□ -2.4
CDC42SE1Q9NRR8 AC010469.2-201ENST00000496412 480 ntBASIC0.05□□□□□ -2.4
CDC42SE1Q9NRR8 AC107401.1-201ENST00000503426 685 ntBASIC0.05□□□□□ -2.4
CDC42SE1Q9NRR8 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.05□□□□□ -2.4
CDC42SE1Q9NRR8 RNU6-311P-201ENST00000516224 102 ntBASIC0.05□□□□□ -2.4
CDC42SE1Q9NRR8 RNU2-56P-201ENST00000516826 190 ntBASIC0.05□□□□□ -2.4
CDC42SE1Q9NRR8 RNU6-445P-201ENST00000516949 107 ntBASIC0.05□□□□□ -2.4
CDC42SE1Q9NRR8 AP002963.1-201ENST00000530590 184 ntBASIC0.05□□□□□ -2.4
CDC42SE1Q9NRR8 AP002004.2-201ENST00000531656 154 ntBASIC0.05□□□□□ -2.4
CDC42SE1Q9NRR8 MTATP6P3-201ENST00000581686 676 ntBASIC0.05□□□□□ -2.4
CDC42SE1Q9NRR8 MIR4424-201ENST00000585257 86 ntBASIC0.05□□□□□ -2.4
CDC42SE1Q9NRR8 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.05□□□□□ -2.4
CDC42SE1Q9NRR8 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.05□□□□□ -2.4
CDC42SE1Q9NRR8 AC068787.1-201ENST00000623908 691 ntBASIC0.05□□□□□ -2.4
CDC42SE1Q9NRR8 SNORD44.1-201ENST00000363202 61 ntBASIC0.04□□□□□ -2.4
CDC42SE1Q9NRR8 RNU6-1214P-201ENST00000363650 109 ntBASIC0.04□□□□□ -2.4
CDC42SE1Q9NRR8 RNU6-517P-201ENST00000384362 110 ntBASIC0.04□□□□□ -2.4
CDC42SE1Q9NRR8 RNU6-456P-201ENST00000384493 107 ntBASIC0.04□□□□□ -2.4
CDC42SE1Q9NRR8 MIR562-201ENST00000384894 95 ntBASIC0.04□□□□□ -2.4
CDC42SE1Q9NRR8 MIR620-201ENST00000385232 95 ntBASIC0.04□□□□□ -2.4
CDC42SE1Q9NRR8 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
CDC42SE1Q9NRR8 RNA5SP219-201ENST00000390940 113 ntBASIC0.04□□□□□ -2.4
CDC42SE1Q9NRR8 RNU5A-5P-201ENST00000411054 116 ntBASIC0.04□□□□□ -2.4
CDC42SE1Q9NRR8 AL392103.1-201ENST00000447000 198 ntBASIC0.04□□□□□ -2.4
CDC42SE1Q9NRR8 MTND4P18-201ENST00000447010 465 ntBASIC0.04□□□□□ -2.4
CDC42SE1Q9NRR8 MTCO3P10-201ENST00000455912 772 ntBASIC0.04□□□□□ -2.4
CDC42SE1Q9NRR8 AC067940.1-201ENST00000458411 300 ntBASIC0.04□□□□□ -2.4
CDC42SE1Q9NRR8 RNU7-95P-201ENST00000459222 64 ntBASIC0.04□□□□□ -2.4
CDC42SE1Q9NRR8 AC010598.1-201ENST00000510378 103 ntBASIC0.04□□□□□ -2.4
CDC42SE1Q9NRR8 RNU6-1096P-201ENST00000517089 102 ntBASIC0.04□□□□□ -2.4
CDC42SE1Q9NRR8 RNU7-172P-201ENST00000517125 64 ntBASIC0.04□□□□□ -2.4
CDC42SE1Q9NRR8 AC104576.1-201ENST00000524225 88 ntBASIC0.04□□□□□ -2.4
CDC42SE1Q9NRR8 AC104383.1-201ENST00000530297 370 ntBASIC0.04□□□□□ -2.4
CDC42SE1Q9NRR8 AC245014.2-201ENST00000603689 287 ntBASIC0.04□□□□□ -2.4
CDC42SE1Q9NRR8 AC011458.1-201ENST00000604034 617 ntBASIC0.04□□□□□ -2.4
CDC42SE1Q9NRR8 AC246785.4-201ENST00000605374 287 ntBASIC0.04□□□□□ -2.4
CDC42SE1Q9NRR8 MIR8076-201ENST00000611401 83 ntBASIC0.04□□□□□ -2.4
CDC42SE1Q9NRR8 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
CDC42SE1Q9NRR8 RNU4-41P-201ENST00000364426 143 ntBASIC0.03□□□□□ -2.4
CDC42SE1Q9NRR8 RNA5SP126-201ENST00000365092 109 ntBASIC0.03□□□□□ -2.4
CDC42SE1Q9NRR8 RNU6-1080P-201ENST00000383982 107 ntBASIC0.03□□□□□ -2.4
CDC42SE1Q9NRR8 MIR573-201ENST00000384964 99 ntBASIC0.03□□□□□ -2.4
CDC42SE1Q9NRR8 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.03□□□□□ -2.4
CDC42SE1Q9NRR8 SNORA40.3-201ENST00000390964 122 ntBASIC0.03□□□□□ -2.4
CDC42SE1Q9NRR8 MIR891A-201ENST00000401237 79 ntBASIC0.03□□□□□ -2.4
CDC42SE1Q9NRR8 RNU2-9P-201ENST00000410194 145 ntBASIC0.03□□□□□ -2.4
CDC42SE1Q9NRR8 RNU6-248P-201ENST00000410720 107 ntBASIC0.03□□□□□ -2.4
CDC42SE1Q9NRR8 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.03□□□□□ -2.4
CDC42SE1Q9NRR8 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.03□□□□□ -2.4
CDC42SE1Q9NRR8 AC133104.1-201ENST00000429100 218 ntBASIC0.03□□□□□ -2.4
CDC42SE1Q9NRR8 AL033528.1-201ENST00000453780 140 ntBASIC0.03□□□□□ -2.4
CDC42SE1Q9NRR8 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.03□□□□□ -2.4
CDC42SE1Q9NRR8 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.03□□□□□ -2.4
CDC42SE1Q9NRR8 AC091179.3-201ENST00000474761 144 ntBASIC0.03□□□□□ -2.4
CDC42SE1Q9NRR8 RNU11-2P-201ENST00000516898 142 ntBASIC0.03□□□□□ -2.4
CDC42SE1Q9NRR8 SNORA74.3-201ENST00000517108 154 ntBASIC0.03□□□□□ -2.4
CDC42SE1Q9NRR8 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.03□□□□□ -2.4
CDC42SE1Q9NRR8 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.03□□□□□ -2.4
CDC42SE1Q9NRR8 AC087683.1-201ENST00000591187 441 ntBASIC0.03□□□□□ -2.4
CDC42SE1Q9NRR8 AC080078.3-201ENST00000605407 463 ntBASIC0.03□□□□□ -2.4
CDC42SE1Q9NRR8 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.03□□□□□ -2.4
CDC42SE1Q9NRR8 AL158209.2-201ENST00000619266 216 ntBASIC0.03□□□□□ -2.4
CDC42SE1Q9NRR8 AC078938.1-201ENST00000620993 318 ntBASIC0.03□□□□□ -2.4
CDC42SE1Q9NRR8 AC027279.3-201ENST00000625055 122 ntBASIC0.03□□□□□ -2.4
CDC42SE1Q9NRR8 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.03□□□□□ -2.4
CDC42SE1Q9NRR8 AC073544.1-201ENST00000600110 1595 ntBASIC0.02□□□□□ -2.41
CDC42SE1Q9NRR8 Y_RNA.126-201ENST00000363382 111 ntBASIC0.02□□□□□ -2.41
CDC42SE1Q9NRR8 RNU6-654P-201ENST00000364373 107 ntBASIC0.02□□□□□ -2.41
CDC42SE1Q9NRR8 SNORD113.3-201ENST00000364630 78 ntBASIC0.02□□□□□ -2.41
CDC42SE1Q9NRR8 Y_RNA.267-201ENST00000364679 109 ntBASIC0.02□□□□□ -2.41
CDC42SE1Q9NRR8 RNU4-45P-201ENST00000365469 141 ntBASIC0.02□□□□□ -2.41
CDC42SE1Q9NRR8 CALM2P3-201ENST00000400429 449 ntBASIC0.02□□□□□ -2.41
CDC42SE1Q9NRR8 RNU6-325P-201ENST00000411132 105 ntBASIC0.02□□□□□ -2.41
CDC42SE1Q9NRR8 ZNF885P-201ENST00000420174 1098 ntBASIC0.02□□□□□ -2.41
CDC42SE1Q9NRR8 CYCSP49-201ENST00000420810 319 ntBASIC0.02□□□□□ -2.41
CDC42SE1Q9NRR8 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC0.02□□□□□ -2.41
CDC42SE1Q9NRR8 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.02□□□□□ -2.41
CDC42SE1Q9NRR8 AC092628.1-201ENST00000436250 252 ntBASIC0.02□□□□□ -2.41
CDC42SE1Q9NRR8 MTND4P32-201ENST00000437189 1237 ntBASIC0.02□□□□□ -2.41
CDC42SE1Q9NRR8 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.02□□□□□ -2.41
CDC42SE1Q9NRR8 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.02□□□□□ -2.41
CDC42SE1Q9NRR8 SNRPGP12-201ENST00000449481 213 ntBASIC0.02□□□□□ -2.41
CDC42SE1Q9NRR8 AC079354.2-201ENST00000453523 154 ntBASIC0.02□□□□□ -2.41
CDC42SE1Q9NRR8 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.02□□□□□ -2.41
CDC42SE1Q9NRR8 SNORD42A-201ENST00000459584 64 ntBASIC0.02□□□□□ -2.41
CDC42SE1Q9NRR8 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms