Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 RNU6-793P-201ENST00000384233 104 ntBASIC1.99□□□□□ -2.09
SIX2Q9NPC8 RNU6-1145P-201ENST00000384246 107 ntBASIC1.99□□□□□ -2.09
SIX2Q9NPC8 MIR561-201ENST00000385216 97 ntBASIC1.99□□□□□ -2.09
SIX2Q9NPC8 RNU6-101P-201ENST00000410323 104 ntBASIC1.99□□□□□ -2.09
SIX2Q9NPC8 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.99□□□□□ -2.09
SIX2Q9NPC8 HMGN2P19-201ENST00000425149 265 ntBASIC1.99□□□□□ -2.09
SIX2Q9NPC8 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.99□□□□□ -2.09
SIX2Q9NPC8 AC010095.1-201ENST00000443543 144 ntBASIC1.99□□□□□ -2.09
SIX2Q9NPC8 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.99□□□□□ -2.09
SIX2Q9NPC8 AC007395.1-201ENST00000451333 677 ntBASIC1.99□□□□□ -2.09
SIX2Q9NPC8 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.99□□□□□ -2.09
SIX2Q9NPC8 AC010469.2-201ENST00000496412 480 ntBASIC1.99□□□□□ -2.09
SIX2Q9NPC8 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.99□□□□□ -2.09
SIX2Q9NPC8 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.99□□□□□ -2.09
SIX2Q9NPC8 RNU6-764P-201ENST00000516396 105 ntBASIC1.99□□□□□ -2.09
SIX2Q9NPC8 Y_RNA.683-201ENST00000516508 93 ntBASIC1.99□□□□□ -2.09
SIX2Q9NPC8 RNU5F-4P-201ENST00000516581 114 ntBASIC1.99□□□□□ -2.09
SIX2Q9NPC8 RPPH1-2P-201ENST00000516688 293 ntBASIC1.99□□□□□ -2.09
SIX2Q9NPC8 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.99□□□□□ -2.09
SIX2Q9NPC8 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.99□□□□□ -2.09
SIX2Q9NPC8 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.99□□□□□ -2.09
SIX2Q9NPC8 AC113195.1-201ENST00000579952 141 ntBASIC1.99□□□□□ -2.09
SIX2Q9NPC8 MZT1P2-201ENST00000604387 248 ntBASIC1.99□□□□□ -2.09
SIX2Q9NPC8 AC124312.5-201ENST00000604451 268 ntBASIC1.99□□□□□ -2.09
SIX2Q9NPC8 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.99□□□□□ -2.09
SIX2Q9NPC8 MIR1248-201ENST00000629190 106 ntBASIC1.99□□□□□ -2.09
SIX2Q9NPC8 U6.92-201ENST00000636464 89 ntBASIC1.99□□□□□ -2.09
SIX2Q9NPC8 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SIX2Q9NPC8 AC135776.4-201ENST00000624300 1904 ntBASIC1.99□□□□□ -2.09
SIX2Q9NPC8 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SIX2Q9NPC8 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
SIX2Q9NPC8 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.98□□□□□ -2.09
SIX2Q9NPC8 Y_RNA.145-201ENST00000363527 102 ntBASIC1.98□□□□□ -2.09
SIX2Q9NPC8 RNU4-50P-201ENST00000364361 141 ntBASIC1.98□□□□□ -2.09
SIX2Q9NPC8 SNORA16.1-201ENST00000364597 132 ntBASIC1.98□□□□□ -2.09
SIX2Q9NPC8 RNU6-1072P-201ENST00000384703 107 ntBASIC1.98□□□□□ -2.09
SIX2Q9NPC8 RNU6-443P-201ENST00000384780 107 ntBASIC1.98□□□□□ -2.09
SIX2Q9NPC8 MIR9-3-201ENST00000385084 90 ntBASIC1.98□□□□□ -2.09
SIX2Q9NPC8 SNORD78.2-201ENST00000391076 69 ntBASIC1.98□□□□□ -2.09
SIX2Q9NPC8 MTND2P23-201ENST00000422990 651 ntBASIC1.98□□□□□ -2.09
SIX2Q9NPC8 RNU7-26P-201ENST00000458980 63 ntBASIC1.98□□□□□ -2.09
SIX2Q9NPC8 RN7SL274P-201ENST00000492268 272 ntBASIC1.98□□□□□ -2.09
SIX2Q9NPC8 RPS23P5-201ENST00000495419 428 ntBASIC1.98□□□□□ -2.09
SIX2Q9NPC8 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.98□□□□□ -2.09
SIX2Q9NPC8 RNU6-1012P-201ENST00000516606 109 ntBASIC1.98□□□□□ -2.09
SIX2Q9NPC8 Y_RNA.715-201ENST00000517082 110 ntBASIC1.98□□□□□ -2.09
SIX2Q9NPC8 AC034114.1-201ENST00000520293 285 ntBASIC1.98□□□□□ -2.09
SIX2Q9NPC8 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.98□□□□□ -2.09
SIX2Q9NPC8 RPS29P30-201ENST00000600975 111 ntBASIC1.98□□□□□ -2.09
SIX2Q9NPC8 AL390123.1-201ENST00000603216 237 ntBASIC1.98□□□□□ -2.09
SIX2Q9NPC8 AC116312.1-201ENST00000606841 314 ntBASIC1.98□□□□□ -2.09
SIX2Q9NPC8 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.98□□□□□ -2.09
SIX2Q9NPC8 MTND5P35-201ENST00000557537 1720 ntBASIC1.97□□□□□ -2.09
SIX2Q9NPC8 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
SIX2Q9NPC8 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SIX2Q9NPC8 RNU6-727P-201ENST00000363592 107 ntBASIC1.97□□□□□ -2.09
SIX2Q9NPC8 SNORD48-201ENST00000364953 64 ntBASIC1.97□□□□□ -2.09
SIX2Q9NPC8 RNA5SP126-201ENST00000365092 109 ntBASIC1.97□□□□□ -2.09
SIX2Q9NPC8 SNORA25B-201ENST00000365507 128 ntBASIC1.97□□□□□ -2.09
SIX2Q9NPC8 SNORD12B-201ENST00000410433 91 ntBASIC1.97□□□□□ -2.09
SIX2Q9NPC8 RNA5SP504-201ENST00000410676 117 ntBASIC1.97□□□□□ -2.09
SIX2Q9NPC8 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.97□□□□□ -2.09
SIX2Q9NPC8 SDAD1P3-201ENST00000427380 333 ntBASIC1.97□□□□□ -2.09
SIX2Q9NPC8 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.97□□□□□ -2.09
SIX2Q9NPC8 IFNA11P-201ENST00000446352 526 ntBASIC1.97□□□□□ -2.09
SIX2Q9NPC8 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.97□□□□□ -2.09
SIX2Q9NPC8 ATP5EP1-201ENST00000510257 156 ntBASIC1.97□□□□□ -2.09
SIX2Q9NPC8 RPL23AP94-201ENST00000512518 302 ntBASIC1.97□□□□□ -2.09
SIX2Q9NPC8 RNU6-327P-201ENST00000516270 127 ntBASIC1.97□□□□□ -2.09
SIX2Q9NPC8 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.97□□□□□ -2.09
SIX2Q9NPC8 AC110588.1-201ENST00000559699 137 ntBASIC1.97□□□□□ -2.09
SIX2Q9NPC8 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.97□□□□□ -2.09
SIX2Q9NPC8 SNORD11B-201ENST00000607707 90 ntBASIC1.97□□□□□ -2.09
SIX2Q9NPC8 PART1_1.1-201ENST00000611761 217 ntBASIC1.97□□□□□ -2.09
SIX2Q9NPC8 AL357075.2-201ENST00000614906 189 ntBASIC1.97□□□□□ -2.09
SIX2Q9NPC8 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SIX2Q9NPC8 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SIX2Q9NPC8 U8.2-201ENST00000363156 134 ntBASIC1.96□□□□□ -2.1
SIX2Q9NPC8 Y_RNA.153-201ENST00000363615 91 ntBASIC1.96□□□□□ -2.1
SIX2Q9NPC8 SNORA63.7-201ENST00000365579 123 ntBASIC1.96□□□□□ -2.1
SIX2Q9NPC8 Y_RNA.380-201ENST00000365663 111 ntBASIC1.96□□□□□ -2.1
SIX2Q9NPC8 SNORA67.2-201ENST00000384300 149 ntBASIC1.96□□□□□ -2.1
SIX2Q9NPC8 Y_RNA.551-201ENST00000384661 102 ntBASIC1.96□□□□□ -2.1
SIX2Q9NPC8 AL033519.2-201ENST00000403958 392 ntBASIC1.96□□□□□ -2.1
SIX2Q9NPC8 MIR1252-201ENST00000408861 65 ntBASIC1.96□□□□□ -2.1
SIX2Q9NPC8 Y_RNA.595-201ENST00000410403 105 ntBASIC1.96□□□□□ -2.1
SIX2Q9NPC8 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.96□□□□□ -2.1
SIX2Q9NPC8 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.96□□□□□ -2.1
SIX2Q9NPC8 RPEP5-201ENST00000441137 268 ntBASIC1.96□□□□□ -2.1
SIX2Q9NPC8 FCF1P4-201ENST00000448326 183 ntBASIC1.96□□□□□ -2.1
SIX2Q9NPC8 RNU7-14P-201ENST00000459331 62 ntBASIC1.96□□□□□ -2.1
SIX2Q9NPC8 Y_RNA.720-201ENST00000517166 92 ntBASIC1.96□□□□□ -2.1
SIX2Q9NPC8 AL121655.1-201ENST00000605811 308 ntBASIC1.96□□□□□ -2.1
SIX2Q9NPC8 AC010205.1-201ENST00000616668 449 ntBASIC1.96□□□□□ -2.1
SIX2Q9NPC8 AL078596.1-201ENST00000624856 447 ntBASIC1.96□□□□□ -2.1
SIX2Q9NPC8 AC008873.1-201ENST00000625051 138 ntBASIC1.96□□□□□ -2.1
SIX2Q9NPC8 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
SIX2Q9NPC8 Y_RNA.415-201ENST00000384012 112 ntBASIC1.95□□□□□ -2.1
SIX2Q9NPC8 RNU6-926P-201ENST00000384075 107 ntBASIC1.95□□□□□ -2.1
SIX2Q9NPC8 Y_RNA.458-201ENST00000384240 102 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms