Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.08□□□□□ -2.08
BRF2Q9HAW0 ZNF72P-201ENST00000425869 1908 ntBASIC2.08□□□□□ -2.08
BRF2Q9HAW0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
BRF2Q9HAW0 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
BRF2Q9HAW0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
BRF2Q9HAW0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
BRF2Q9HAW0 Y_RNA.5-201ENST00000362334 102 ntBASIC2.07□□□□□ -2.08
BRF2Q9HAW0 RNU6-926P-201ENST00000384075 107 ntBASIC2.07□□□□□ -2.08
BRF2Q9HAW0 RNU6-1145P-201ENST00000384246 107 ntBASIC2.07□□□□□ -2.08
BRF2Q9HAW0 SNORA8-201ENST00000384574 139 ntBASIC2.07□□□□□ -2.08
BRF2Q9HAW0 RNA5SP501-201ENST00000410990 112 ntBASIC2.07□□□□□ -2.08
BRF2Q9HAW0 MTCO3P19-201ENST00000415864 321 ntBASIC2.07□□□□□ -2.08
BRF2Q9HAW0 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.07□□□□□ -2.08
BRF2Q9HAW0 RPL23AP6-201ENST00000446637 472 ntBASIC2.07□□□□□ -2.08
BRF2Q9HAW0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.07□□□□□ -2.08
BRF2Q9HAW0 AC023442.1-201ENST00000531247 422 ntBASIC2.07□□□□□ -2.08
BRF2Q9HAW0 AP002770.2-201ENST00000543613 532 ntBASIC2.07□□□□□ -2.08
BRF2Q9HAW0 HSBP1P1-201ENST00000555205 166 ntBASIC2.07□□□□□ -2.08
BRF2Q9HAW0 MIR5002-201ENST00000584713 97 ntBASIC2.07□□□□□ -2.08
BRF2Q9HAW0 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.06□□□□□ -2.08
BRF2Q9HAW0 RNU6-318P-201ENST00000384283 103 ntBASIC2.06□□□□□ -2.08
BRF2Q9HAW0 RNU4-53P-201ENST00000410828 140 ntBASIC2.06□□□□□ -2.08
BRF2Q9HAW0 AC244636.1-201ENST00000421152 228 ntBASIC2.06□□□□□ -2.08
BRF2Q9HAW0 RNU6-625P-201ENST00000459412 107 ntBASIC2.06□□□□□ -2.08
BRF2Q9HAW0 RNA5SP57-201ENST00000459463 123 ntBASIC2.06□□□□□ -2.08
BRF2Q9HAW0 AC074133.1-201ENST00000515696 183 ntBASIC2.06□□□□□ -2.08
BRF2Q9HAW0 RNU6-1041P-201ENST00000516254 102 ntBASIC2.06□□□□□ -2.08
BRF2Q9HAW0 AL442163.3-201ENST00000554110 156 ntBASIC2.06□□□□□ -2.08
BRF2Q9HAW0 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.06□□□□□ -2.08
BRF2Q9HAW0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.06□□□□□ -2.08
BRF2Q9HAW0 AL627230.6-201ENST00000611129 280 ntBASIC2.06□□□□□ -2.08
BRF2Q9HAW0 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.06□□□□□ -2.08
BRF2Q9HAW0 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
BRF2Q9HAW0 MTND5P6-201ENST00000422338 1798 ntBASIC2.05□□□□□ -2.08
BRF2Q9HAW0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.05□□□□□ -2.08
BRF2Q9HAW0 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
BRF2Q9HAW0 Y_RNA.11-201ENST00000362375 109 ntBASIC2.05□□□□□ -2.08
BRF2Q9HAW0 RNU1-115P-201ENST00000365329 160 ntBASIC2.05□□□□□ -2.08
BRF2Q9HAW0 Y_RNA.496-201ENST00000384444 101 ntBASIC2.05□□□□□ -2.08
BRF2Q9HAW0 MIR515-2-201ENST00000384883 83 ntBASIC2.05□□□□□ -2.08
BRF2Q9HAW0 MIR515-1-201ENST00000384884 83 ntBASIC2.05□□□□□ -2.08
BRF2Q9HAW0 MTCO2P12-201ENST00000427426 682 ntBASIC2.05□□□□□ -2.08
BRF2Q9HAW0 TOMM22P2-201ENST00000430735 237 ntBASIC2.05□□□□□ -2.08
BRF2Q9HAW0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.05□□□□□ -2.08
BRF2Q9HAW0 AC011406.1-201ENST00000512440 370 ntBASIC2.05□□□□□ -2.08
BRF2Q9HAW0 SNORA40.9-201ENST00000515895 93 ntBASIC2.05□□□□□ -2.08
BRF2Q9HAW0 RNU6-911P-201ENST00000516523 104 ntBASIC2.05□□□□□ -2.08
BRF2Q9HAW0 MIR514B-201ENST00000516774 80 ntBASIC2.05□□□□□ -2.08
BRF2Q9HAW0 AC069114.2-201ENST00000604699 304 ntBASIC2.05□□□□□ -2.08
BRF2Q9HAW0 AL773524.1-201ENST00000614065 229 ntBASIC2.05□□□□□ -2.08
BRF2Q9HAW0 uc_338.22-201ENST00000622722 187 ntBASIC2.05□□□□□ -2.08
BRF2Q9HAW0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
BRF2Q9HAW0 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.04□□□□□ -2.08
BRF2Q9HAW0 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
BRF2Q9HAW0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
BRF2Q9HAW0 RNU6-1264P-201ENST00000383891 107 ntBASIC2.04□□□□□ -2.08
BRF2Q9HAW0 RNY3P4-201ENST00000384428 101 ntBASIC2.04□□□□□ -2.08
BRF2Q9HAW0 SNORD78.2-201ENST00000391076 69 ntBASIC2.04□□□□□ -2.08
BRF2Q9HAW0 AC060773.1-201ENST00000421698 310 ntBASIC2.04□□□□□ -2.08
BRF2Q9HAW0 AL356320.1-201ENST00000429616 163 ntBASIC2.04□□□□□ -2.08
BRF2Q9HAW0 AL160004.2-201ENST00000432935 350 ntBASIC2.04□□□□□ -2.08
BRF2Q9HAW0 HMGN2P34-201ENST00000437647 269 ntBASIC2.04□□□□□ -2.08
BRF2Q9HAW0 AC007677.1-201ENST00000445757 515 ntBASIC2.04□□□□□ -2.08
BRF2Q9HAW0 FCF1P4-201ENST00000448326 183 ntBASIC2.04□□□□□ -2.08
BRF2Q9HAW0 RNU6-221P-201ENST00000459541 99 ntBASIC2.04□□□□□ -2.08
BRF2Q9HAW0 AC079804.2-201ENST00000490376 200 ntBASIC2.04□□□□□ -2.08
BRF2Q9HAW0 AC090255.1-201ENST00000495779 349 ntBASIC2.04□□□□□ -2.08
BRF2Q9HAW0 RNVU1-2-201ENST00000516326 135 ntBASIC2.04□□□□□ -2.08
BRF2Q9HAW0 AC018448.1-201ENST00000552843 316 ntBASIC2.04□□□□□ -2.08
BRF2Q9HAW0 MIR4299-201ENST00000577899 72 ntBASIC2.04□□□□□ -2.08
BRF2Q9HAW0 RPS29P30-201ENST00000600975 111 ntBASIC2.04□□□□□ -2.08
BRF2Q9HAW0 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.04□□□□□ -2.08
BRF2Q9HAW0 AL357075.2-201ENST00000614906 189 ntBASIC2.04□□□□□ -2.08
BRF2Q9HAW0 AL606534.2-204ENST00000635008 178 ntBASIC2.04□□□□□ -2.08
BRF2Q9HAW0 MIR4272-201ENST00000635924 64 ntBASIC2.04□□□□□ -2.08
BRF2Q9HAW0 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.03□□□□□ -2.08
BRF2Q9HAW0 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.03□□□□□ -2.08
BRF2Q9HAW0 Y_RNA.112-201ENST00000363250 102 ntBASIC2.03□□□□□ -2.08
BRF2Q9HAW0 SNORA72.2-201ENST00000365028 127 ntBASIC2.03□□□□□ -2.08
BRF2Q9HAW0 SNORD42.2-201ENST00000365570 69 ntBASIC2.03□□□□□ -2.08
BRF2Q9HAW0 MIR634-201ENST00000385208 97 ntBASIC2.03□□□□□ -2.08
BRF2Q9HAW0 RNU6-308P-201ENST00000390957 107 ntBASIC2.03□□□□□ -2.08
BRF2Q9HAW0 MIR1185-2-201ENST00000408687 86 ntBASIC2.03□□□□□ -2.08
BRF2Q9HAW0 RNA5SP475-201ENST00000410568 110 ntBASIC2.03□□□□□ -2.08
BRF2Q9HAW0 AC018865.2-201ENST00000423631 129 ntBASIC2.03□□□□□ -2.08
BRF2Q9HAW0 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.03□□□□□ -2.08
BRF2Q9HAW0 AC069257.2-201ENST00000441819 155 ntBASIC2.03□□□□□ -2.08
BRF2Q9HAW0 Y_RNA.639-201ENST00000458981 102 ntBASIC2.03□□□□□ -2.08
BRF2Q9HAW0 AC025033.1-201ENST00000463883 194 ntBASIC2.03□□□□□ -2.08
BRF2Q9HAW0 MRPS17P9-201ENST00000511924 393 ntBASIC2.03□□□□□ -2.08
BRF2Q9HAW0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.03□□□□□ -2.08
BRF2Q9HAW0 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.03□□□□□ -2.08
BRF2Q9HAW0 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.03□□□□□ -2.08
BRF2Q9HAW0 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.03□□□□□ -2.08
BRF2Q9HAW0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.03□□□□□ -2.08
BRF2Q9HAW0 AC091932.3-201ENST00000624223 323 ntBASIC2.03□□□□□ -2.08
BRF2Q9HAW0 AC138305.3-201ENST00000624988 240 ntBASIC2.03□□□□□ -2.08
BRF2Q9HAW0 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.03□□□□□ -2.08
BRF2Q9HAW0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
BRF2Q9HAW0 Y_RNA.27-201ENST00000362540 103 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms