Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 RNU6-997P-201ENST00000384725 107 ntBASIC1.6□□□□□ -2.15
RNF41Q9H4P4 MIR10B-201ENST00000385011 110 ntBASIC1.6□□□□□ -2.15
RNF41Q9H4P4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.6□□□□□ -2.15
RNF41Q9H4P4 AC099677.2-201ENST00000436385 175 ntBASIC1.6□□□□□ -2.15
RNF41Q9H4P4 HSPE1P21-201ENST00000438283 308 ntBASIC1.6□□□□□ -2.15
RNF41Q9H4P4 AC098614.3-201ENST00000438957 440 ntBASIC1.6□□□□□ -2.15
RNF41Q9H4P4 AL357134.1-201ENST00000445848 426 ntBASIC1.6□□□□□ -2.15
RNF41Q9H4P4 MTND4P17-201ENST00000470444 350 ntBASIC1.6□□□□□ -2.15
RNF41Q9H4P4 HMGN2P9-201ENST00000476875 229 ntBASIC1.6□□□□□ -2.15
RNF41Q9H4P4 RPL7P42-201ENST00000481005 679 ntBASIC1.6□□□□□ -2.15
RNF41Q9H4P4 RNU7-175P-201ENST00000515915 61 ntBASIC1.6□□□□□ -2.15
RNF41Q9H4P4 RNU6-1198P-201ENST00000516904 67 ntBASIC1.6□□□□□ -2.15
RNF41Q9H4P4 Y_RNA.708-201ENST00000516950 96 ntBASIC1.6□□□□□ -2.15
RNF41Q9H4P4 RNU6-856P-201ENST00000516959 98 ntBASIC1.6□□□□□ -2.15
RNF41Q9H4P4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.6□□□□□ -2.15
RNF41Q9H4P4 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.6□□□□□ -2.15
RNF41Q9H4P4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.6□□□□□ -2.15
RNF41Q9H4P4 UBL5P4-201ENST00000562584 236 ntBASIC1.6□□□□□ -2.15
RNF41Q9H4P4 SUB1P3-201ENST00000564581 315 ntBASIC1.6□□□□□ -2.15
RNF41Q9H4P4 SUB1P4-201ENST00000566062 339 ntBASIC1.6□□□□□ -2.15
RNF41Q9H4P4 AC005786.1-201ENST00000588553 154 ntBASIC1.6□□□□□ -2.15
RNF41Q9H4P4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.6□□□□□ -2.15
RNF41Q9H4P4 AC010900.2-201ENST00000604508 210 ntBASIC1.6□□□□□ -2.15
RNF41Q9H4P4 AC016727.1-205ENST00000605437 569 ntBASIC1.6□□□□□ -2.15
RNF41Q9H4P4 AL355802.3-201ENST00000607571 545 ntBASIC1.6□□□□□ -2.15
RNF41Q9H4P4 SNORA7.1-201ENST00000363750 139 ntBASIC1.59□□□□□ -2.15
RNF41Q9H4P4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.59□□□□□ -2.15
RNF41Q9H4P4 RNU6-1026P-201ENST00000384465 108 ntBASIC1.59□□□□□ -2.15
RNF41Q9H4P4 MIR586-201ENST00000385035 97 ntBASIC1.59□□□□□ -2.15
RNF41Q9H4P4 RNA5SP212-201ENST00000391223 107 ntBASIC1.59□□□□□ -2.15
RNF41Q9H4P4 AL117342.1-201ENST00000404861 406 ntBASIC1.59□□□□□ -2.15
RNF41Q9H4P4 RNA5SP100-201ENST00000410903 110 ntBASIC1.59□□□□□ -2.15
RNF41Q9H4P4 RNA5SP59-201ENST00000410922 110 ntBASIC1.59□□□□□ -2.15
RNF41Q9H4P4 AC060773.1-201ENST00000421698 310 ntBASIC1.59□□□□□ -2.15
RNF41Q9H4P4 AL603825.1-201ENST00000438481 80 ntBASIC1.59□□□□□ -2.15
RNF41Q9H4P4 AC016717.1-201ENST00000448918 286 ntBASIC1.59□□□□□ -2.15
RNF41Q9H4P4 AP000870.1-201ENST00000472927 406 ntBASIC1.59□□□□□ -2.15
RNF41Q9H4P4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.59□□□□□ -2.15
RNF41Q9H4P4 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.59□□□□□ -2.15
RNF41Q9H4P4 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.59□□□□□ -2.15
RNF41Q9H4P4 AC105029.1-201ENST00000520250 669 ntBASIC1.59□□□□□ -2.15
RNF41Q9H4P4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.59□□□□□ -2.15
RNF41Q9H4P4 CYP2C61P-201ENST00000604072 290 ntBASIC1.59□□□□□ -2.15
RNF41Q9H4P4 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.59□□□□□ -2.15
RNF41Q9H4P4 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.59□□□□□ -2.15
RNF41Q9H4P4 AC008873.1-201ENST00000625051 138 ntBASIC1.59□□□□□ -2.15
RNF41Q9H4P4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
RNF41Q9H4P4 Y_RNA.2-201ENST00000362330 96 ntBASIC1.58□□□□□ -2.16
RNF41Q9H4P4 RNU6-874P-201ENST00000362390 105 ntBASIC1.58□□□□□ -2.16
RNF41Q9H4P4 RNU1-62P-201ENST00000362599 164 ntBASIC1.58□□□□□ -2.16
RNF41Q9H4P4 Y_RNA.132-201ENST00000363421 102 ntBASIC1.58□□□□□ -2.16
RNF41Q9H4P4 RNU6-873P-201ENST00000363833 107 ntBASIC1.58□□□□□ -2.16
RNF41Q9H4P4 SNORA75.4-201ENST00000391278 119 ntBASIC1.58□□□□□ -2.16
RNF41Q9H4P4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.58□□□□□ -2.16
RNF41Q9H4P4 AC009310.1-201ENST00000414414 451 ntBASIC1.58□□□□□ -2.16
RNF41Q9H4P4 MTND3P23-201ENST00000431980 347 ntBASIC1.58□□□□□ -2.16
RNF41Q9H4P4 AL445305.1-201ENST00000432577 575 ntBASIC1.58□□□□□ -2.16
RNF41Q9H4P4 RNU1-123P-201ENST00000458950 160 ntBASIC1.58□□□□□ -2.16
RNF41Q9H4P4 RNA5SP61-201ENST00000516453 100 ntBASIC1.58□□□□□ -2.16
RNF41Q9H4P4 RNU6-1213P-201ENST00000517075 94 ntBASIC1.58□□□□□ -2.16
RNF41Q9H4P4 AC134698.4-201ENST00000523451 826 ntBASIC1.58□□□□□ -2.16
RNF41Q9H4P4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.58□□□□□ -2.16
RNF41Q9H4P4 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.58□□□□□ -2.16
RNF41Q9H4P4 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.58□□□□□ -2.16
RNF41Q9H4P4 U1.36-201ENST00000620684 176 ntBASIC1.58□□□□□ -2.16
RNF41Q9H4P4 AL159152.1-201ENST00000635019 2587 ntBASIC1.57□□□□□ -2.16
RNF41Q9H4P4 Y_RNA.106-201ENST00000363189 100 ntBASIC1.57□□□□□ -2.16
RNF41Q9H4P4 RNU6-1305P-201ENST00000364353 104 ntBASIC1.57□□□□□ -2.16
RNF41Q9H4P4 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.57□□□□□ -2.16
RNF41Q9H4P4 RNU6-281P-201ENST00000384212 103 ntBASIC1.57□□□□□ -2.16
RNF41Q9H4P4 MIR758-201ENST00000390227 88 ntBASIC1.57□□□□□ -2.16
RNF41Q9H4P4 RN7SKP51-201ENST00000410781 304 ntBASIC1.57□□□□□ -2.16
RNF41Q9H4P4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.57□□□□□ -2.16
RNF41Q9H4P4 AC097473.1-201ENST00000508142 408 ntBASIC1.57□□□□□ -2.16
RNF41Q9H4P4 RNU6-948P-201ENST00000516374 107 ntBASIC1.57□□□□□ -2.16
RNF41Q9H4P4 SNORA25.14-201ENST00000516481 132 ntBASIC1.57□□□□□ -2.16
RNF41Q9H4P4 RNU2-34P-201ENST00000516534 121 ntBASIC1.57□□□□□ -2.16
RNF41Q9H4P4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.57□□□□□ -2.16
RNF41Q9H4P4 AC005668.1-201ENST00000571142 476 ntBASIC1.57□□□□□ -2.16
RNF41Q9H4P4 AC099654.5-201ENST00000636479 350 ntBASIC1.57□□□□□ -2.16
RNF41Q9H4P4 MTND5P10-201ENST00000603719 1809 ntBASIC1.56□□□□□ -2.16
RNF41Q9H4P4 RNY1P16-201ENST00000363063 111 ntBASIC1.56□□□□□ -2.16
RNF41Q9H4P4 SNORA72.1-201ENST00000363485 129 ntBASIC1.56□□□□□ -2.16
RNF41Q9H4P4 RNU6-1235P-201ENST00000384559 107 ntBASIC1.56□□□□□ -2.16
RNF41Q9H4P4 RNU1-139P-201ENST00000391307 165 ntBASIC1.56□□□□□ -2.16
RNF41Q9H4P4 MIR190B-201ENST00000401119 79 ntBASIC1.56□□□□□ -2.16
RNF41Q9H4P4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.56□□□□□ -2.16
RNF41Q9H4P4 USMG5P1-201ENST00000425964 177 ntBASIC1.56□□□□□ -2.16
RNF41Q9H4P4 RNU6-498P-201ENST00000459468 107 ntBASIC1.56□□□□□ -2.16
RNF41Q9H4P4 AC091179.3-201ENST00000474761 144 ntBASIC1.56□□□□□ -2.16
RNF41Q9H4P4 AC010409.1-201ENST00000487382 476 ntBASIC1.56□□□□□ -2.16
RNF41Q9H4P4 AC091951.2-201ENST00000500762 203 ntBASIC1.56□□□□□ -2.16
RNF41Q9H4P4 RNU6-277P-201ENST00000516272 106 ntBASIC1.56□□□□□ -2.16
RNF41Q9H4P4 SCARNA16.2-201ENST00000516520 172 ntBASIC1.56□□□□□ -2.16
RNF41Q9H4P4 APOOP3-201ENST00000536787 586 ntBASIC1.56□□□□□ -2.16
RNF41Q9H4P4 AL121579.1-201ENST00000555129 305 ntBASIC1.56□□□□□ -2.16
RNF41Q9H4P4 MIR4753-201ENST00000585119 83 ntBASIC1.56□□□□□ -2.16
RNF41Q9H4P4 UBE2V2P2-201ENST00000587677 504 ntBASIC1.56□□□□□ -2.16
RNF41Q9H4P4 snoU13.31-201ENST00000607291 104 ntBASIC1.56□□□□□ -2.16
RNF41Q9H4P4 AL359697.1-201ENST00000624879 587 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms