Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AL121579.1-201ENST00000555129 305 ntBASIC1.69□□□□□ -2.14
UBQLN3Q9H347 SUB1P4-201ENST00000566062 339 ntBASIC1.69□□□□□ -2.14
UBQLN3Q9H347 MIR5701-3-201ENST00000578890 82 ntBASIC1.69□□□□□ -2.14
UBQLN3Q9H347 AC005730.3-201ENST00000583067 366 ntBASIC1.69□□□□□ -2.14
UBQLN3Q9H347 AC005899.2-201ENST00000584353 90 ntBASIC1.69□□□□□ -2.14
UBQLN3Q9H347 MIR5701-1-201ENST00000585138 82 ntBASIC1.69□□□□□ -2.14
UBQLN3Q9H347 AC103810.8-201ENST00000607347 118 ntBASIC1.69□□□□□ -2.14
UBQLN3Q9H347 MIR5701-2-201ENST00000615634 82 ntBASIC1.69□□□□□ -2.14
UBQLN3Q9H347 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.69□□□□□ -2.14
UBQLN3Q9H347 AC008873.1-201ENST00000625051 138 ntBASIC1.69□□□□□ -2.14
UBQLN3Q9H347 snoZ196.1-201ENST00000625269 89 ntBASIC1.69□□□□□ -2.14
UBQLN3Q9H347 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
UBQLN3Q9H347 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
UBQLN3Q9H347 MIR1253-201ENST00000408273 105 ntBASIC1.68□□□□□ -2.14
UBQLN3Q9H347 AC007098.1-201ENST00000420122 367 ntBASIC1.68□□□□□ -2.14
UBQLN3Q9H347 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.68□□□□□ -2.14
UBQLN3Q9H347 MTCYBP10-201ENST00000424905 650 ntBASIC1.68□□□□□ -2.14
UBQLN3Q9H347 AC092423.1-201ENST00000430165 186 ntBASIC1.68□□□□□ -2.14
UBQLN3Q9H347 HSPE1P21-201ENST00000438283 308 ntBASIC1.68□□□□□ -2.14
UBQLN3Q9H347 AC010409.1-201ENST00000487382 476 ntBASIC1.68□□□□□ -2.14
UBQLN3Q9H347 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.68□□□□□ -2.14
UBQLN3Q9H347 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.68□□□□□ -2.14
UBQLN3Q9H347 MIR4524B-201ENST00000581569 115 ntBASIC1.68□□□□□ -2.14
UBQLN3Q9H347 MZT1P2-201ENST00000604387 248 ntBASIC1.68□□□□□ -2.14
UBQLN3Q9H347 AC069114.2-201ENST00000604699 304 ntBASIC1.68□□□□□ -2.14
UBQLN3Q9H347 RBM11P1-201ENST00000604951 799 ntBASIC1.68□□□□□ -2.14
UBQLN3Q9H347 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.68□□□□□ -2.14
UBQLN3Q9H347 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.68□□□□□ -2.14
UBQLN3Q9H347 AC010999.1-201ENST00000611856 324 ntBASIC1.68□□□□□ -2.14
UBQLN3Q9H347 AC126177.8-201ENST00000618339 1015 ntBASIC1.68□□□□□ -2.14
UBQLN3Q9H347 AC092794.2-201ENST00000620933 563 ntBASIC1.68□□□□□ -2.14
UBQLN3Q9H347 Y_RNA.142-201ENST00000363491 102 ntBASIC1.67□□□□□ -2.14
UBQLN3Q9H347 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.67□□□□□ -2.14
UBQLN3Q9H347 MIR548B-201ENST00000385247 97 ntBASIC1.67□□□□□ -2.14
UBQLN3Q9H347 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
UBQLN3Q9H347 SNORA40.18-201ENST00000391200 128 ntBASIC1.67□□□□□ -2.14
UBQLN3Q9H347 CYCSP49-201ENST00000420810 319 ntBASIC1.67□□□□□ -2.14
UBQLN3Q9H347 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.67□□□□□ -2.14
UBQLN3Q9H347 HMGN2P34-201ENST00000437647 269 ntBASIC1.67□□□□□ -2.14
UBQLN3Q9H347 AC112492.4-201ENST00000456549 352 ntBASIC1.67□□□□□ -2.14
UBQLN3Q9H347 HMGN2P23-201ENST00000456759 269 ntBASIC1.67□□□□□ -2.14
UBQLN3Q9H347 RPS29P11-201ENST00000496507 171 ntBASIC1.67□□□□□ -2.14
UBQLN3Q9H347 AC008834.1-201ENST00000511612 175 ntBASIC1.67□□□□□ -2.14
UBQLN3Q9H347 AC093303.1-201ENST00000514549 295 ntBASIC1.67□□□□□ -2.14
UBQLN3Q9H347 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.67□□□□□ -2.14
UBQLN3Q9H347 RNU6-107P-201ENST00000516643 102 ntBASIC1.67□□□□□ -2.14
UBQLN3Q9H347 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.67□□□□□ -2.14
UBQLN3Q9H347 AC105029.1-201ENST00000520250 669 ntBASIC1.67□□□□□ -2.14
UBQLN3Q9H347 AC093023.1-201ENST00000547375 507 ntBASIC1.67□□□□□ -2.14
UBQLN3Q9H347 AC015712.3-201ENST00000559380 164 ntBASIC1.67□□□□□ -2.14
UBQLN3Q9H347 MIR3198-2-201ENST00000577868 80 ntBASIC1.67□□□□□ -2.14
UBQLN3Q9H347 AC010900.2-201ENST00000604508 210 ntBASIC1.67□□□□□ -2.14
UBQLN3Q9H347 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
UBQLN3Q9H347 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
UBQLN3Q9H347 SNORA72.1-201ENST00000363485 129 ntBASIC1.66□□□□□ -2.14
UBQLN3Q9H347 Y_RNA.364-201ENST00000365532 101 ntBASIC1.66□□□□□ -2.14
UBQLN3Q9H347 RNU6-281P-201ENST00000384212 103 ntBASIC1.66□□□□□ -2.14
UBQLN3Q9H347 MIR30A-201ENST00000385092 71 ntBASIC1.66□□□□□ -2.14
UBQLN3Q9H347 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
UBQLN3Q9H347 RNU2-7P-201ENST00000410794 178 ntBASIC1.66□□□□□ -2.14
UBQLN3Q9H347 RPL31P63-201ENST00000422565 375 ntBASIC1.66□□□□□ -2.14
UBQLN3Q9H347 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.66□□□□□ -2.14
UBQLN3Q9H347 SNORA31.17-201ENST00000516953 127 ntBASIC1.66□□□□□ -2.14
UBQLN3Q9H347 AC090617.3-201ENST00000573670 475 ntBASIC1.66□□□□□ -2.14
UBQLN3Q9H347 MIR4419B-201ENST00000577260 68 ntBASIC1.66□□□□□ -2.14
UBQLN3Q9H347 MIR5690-201ENST00000583739 73 ntBASIC1.66□□□□□ -2.14
UBQLN3Q9H347 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
UBQLN3Q9H347 MTND5P35-201ENST00000557537 1720 ntBASIC1.66□□□□□ -2.14
UBQLN3Q9H347 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
UBQLN3Q9H347 RNU6-112P-201ENST00000363599 104 ntBASIC1.65□□□□□ -2.15
UBQLN3Q9H347 U3.8-201ENST00000363675 217 ntBASIC1.65□□□□□ -2.15
UBQLN3Q9H347 RNU6-417P-201ENST00000384712 107 ntBASIC1.65□□□□□ -2.15
UBQLN3Q9H347 RNU1-139P-201ENST00000391307 165 ntBASIC1.65□□□□□ -2.15
UBQLN3Q9H347 AL117342.1-201ENST00000404861 406 ntBASIC1.65□□□□□ -2.15
UBQLN3Q9H347 RPL17P19-201ENST00000489069 552 ntBASIC1.65□□□□□ -2.15
UBQLN3Q9H347 AC108210.2-201ENST00000503681 201 ntBASIC1.65□□□□□ -2.15
UBQLN3Q9H347 RNU6-559P-201ENST00000516151 98 ntBASIC1.65□□□□□ -2.15
UBQLN3Q9H347 RNU6-1146P-201ENST00000516282 102 ntBASIC1.65□□□□□ -2.15
UBQLN3Q9H347 Y_RNA.683-201ENST00000516508 93 ntBASIC1.65□□□□□ -2.15
UBQLN3Q9H347 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.65□□□□□ -2.15
UBQLN3Q9H347 AC004584.2-201ENST00000570407 410 ntBASIC1.65□□□□□ -2.15
UBQLN3Q9H347 AC024614.2-201ENST00000577584 372 ntBASIC1.65□□□□□ -2.15
UBQLN3Q9H347 UBE2V2P2-201ENST00000587677 504 ntBASIC1.65□□□□□ -2.15
UBQLN3Q9H347 AC113139.1-201ENST00000605049 239 ntBASIC1.65□□□□□ -2.15
UBQLN3Q9H347 MIR1244-1-201ENST00000612829 85 ntBASIC1.65□□□□□ -2.15
UBQLN3Q9H347 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.65□□□□□ -2.15
UBQLN3Q9H347 MIR1244-3-201ENST00000635744 85 ntBASIC1.65□□□□□ -2.15
UBQLN3Q9H347 MIR338-201ENST00000636369 67 ntBASIC1.65□□□□□ -2.15
UBQLN3Q9H347 MIR1244-2-201ENST00000636449 85 ntBASIC1.65□□□□□ -2.15
UBQLN3Q9H347 MIR1244-4-202ENST00000636813 85 ntBASIC1.65□□□□□ -2.15
UBQLN3Q9H347 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
UBQLN3Q9H347 AC010615.1-201ENST00000594254 1764 ntBASIC1.64□□□□□ -2.15
UBQLN3Q9H347 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
UBQLN3Q9H347 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
UBQLN3Q9H347 RNU6-874P-201ENST00000362390 105 ntBASIC1.64□□□□□ -2.15
UBQLN3Q9H347 RNU6-661P-201ENST00000362409 107 ntBASIC1.64□□□□□ -2.15
UBQLN3Q9H347 snoU2-30.2-201ENST00000362805 70 ntBASIC1.64□□□□□ -2.15
UBQLN3Q9H347 RNU6-879P-201ENST00000364328 108 ntBASIC1.64□□□□□ -2.15
UBQLN3Q9H347 RNU6-1019P-201ENST00000364424 107 ntBASIC1.64□□□□□ -2.15
UBQLN3Q9H347 RNU6-99P-201ENST00000364721 107 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms