Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.43□□□□□ -2.18
DDX47Q9H0S4 AC024995.1-201ENST00000523014 93 ntBASIC1.43□□□□□ -2.18
DDX47Q9H0S4 AK6P2-201ENST00000549020 471 ntBASIC1.43□□□□□ -2.18
DDX47Q9H0S4 AL160236.1-201ENST00000556317 195 ntBASIC1.43□□□□□ -2.18
DDX47Q9H0S4 UBL5P4-201ENST00000562584 236 ntBASIC1.43□□□□□ -2.18
DDX47Q9H0S4 SNORD53B-201ENST00000577887 78 ntBASIC1.43□□□□□ -2.18
DDX47Q9H0S4 AL645939.4-201ENST00000604495 135 ntBASIC1.43□□□□□ -2.18
DDX47Q9H0S4 AC009248.2-201ENST00000619826 254 ntBASIC1.43□□□□□ -2.18
DDX47Q9H0S4 AL161722.3-201ENST00000605789 2983 ntBASIC1.42□□□□□ -2.18
DDX47Q9H0S4 Y_RNA.157-201ENST00000363638 102 ntBASIC1.42□□□□□ -2.18
DDX47Q9H0S4 Y_RNA.295-201ENST00000364918 102 ntBASIC1.42□□□□□ -2.18
DDX47Q9H0S4 RNU6-1240P-201ENST00000365155 104 ntBASIC1.42□□□□□ -2.18
DDX47Q9H0S4 RNU6-541P-201ENST00000384709 110 ntBASIC1.42□□□□□ -2.18
DDX47Q9H0S4 SNORD116-4-201ENST00000384733 96 ntBASIC1.42□□□□□ -2.18
DDX47Q9H0S4 RNU6-159P-201ENST00000391080 106 ntBASIC1.42□□□□□ -2.18
DDX47Q9H0S4 RNA5SP118-201ENST00000410385 109 ntBASIC1.42□□□□□ -2.18
DDX47Q9H0S4 AC009161.1-201ENST00000417306 376 ntBASIC1.42□□□□□ -2.18
DDX47Q9H0S4 RPS29P29-201ENST00000456396 171 ntBASIC1.42□□□□□ -2.18
DDX47Q9H0S4 AL163195.1-201ENST00000496941 348 ntBASIC1.42□□□□□ -2.18
DDX47Q9H0S4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.42□□□□□ -2.18
DDX47Q9H0S4 AC079140.2-201ENST00000506193 142 ntBASIC1.42□□□□□ -2.18
DDX47Q9H0S4 AC019176.1-201ENST00000518519 225 ntBASIC1.42□□□□□ -2.18
DDX47Q9H0S4 MIR4709-201ENST00000577272 72 ntBASIC1.42□□□□□ -2.18
DDX47Q9H0S4 U4.5-201ENST00000617137 123 ntBASIC1.42□□□□□ -2.18
DDX47Q9H0S4 RNA5SP432-201ENST00000362480 116 ntBASIC1.41□□□□□ -2.18
DDX47Q9H0S4 RNU6-727P-201ENST00000363592 107 ntBASIC1.41□□□□□ -2.18
DDX47Q9H0S4 RNU4-40P-201ENST00000364351 143 ntBASIC1.41□□□□□ -2.18
DDX47Q9H0S4 RNU6-596P-201ENST00000365395 98 ntBASIC1.41□□□□□ -2.18
DDX47Q9H0S4 Y_RNA.415-201ENST00000384012 112 ntBASIC1.41□□□□□ -2.18
DDX47Q9H0S4 Y_RNA.533-201ENST00000384596 114 ntBASIC1.41□□□□□ -2.18
DDX47Q9H0S4 Y_RNA.573-201ENST00000384763 105 ntBASIC1.41□□□□□ -2.18
DDX47Q9H0S4 MIR758-201ENST00000390227 88 ntBASIC1.41□□□□□ -2.18
DDX47Q9H0S4 RNA5SP109-201ENST00000391010 116 ntBASIC1.41□□□□□ -2.18
DDX47Q9H0S4 RNA5SP323-201ENST00000391094 133 ntBASIC1.41□□□□□ -2.18
DDX47Q9H0S4 MRPL35P1-201ENST00000404272 572 ntBASIC1.41□□□□□ -2.18
DDX47Q9H0S4 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.41□□□□□ -2.18
DDX47Q9H0S4 NDUFB4P10-201ENST00000452541 359 ntBASIC1.41□□□□□ -2.18
DDX47Q9H0S4 AC091179.3-201ENST00000474761 144 ntBASIC1.41□□□□□ -2.18
DDX47Q9H0S4 HMGN1P12-201ENST00000499125 195 ntBASIC1.41□□□□□ -2.18
DDX47Q9H0S4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.41□□□□□ -2.18
DDX47Q9H0S4 MIR3662-201ENST00000637030 95 ntBASIC1.41□□□□□ -2.18
DDX47Q9H0S4 U6.108-201ENST00000637764 58 ntBASIC1.41□□□□□ -2.18
DDX47Q9H0S4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
DDX47Q9H0S4 U3.8-201ENST00000363675 217 ntBASIC1.4□□□□□ -2.19
DDX47Q9H0S4 MIR1185-2-201ENST00000408687 86 ntBASIC1.4□□□□□ -2.19
DDX47Q9H0S4 RNU6-174P-201ENST00000410406 106 ntBASIC1.4□□□□□ -2.19
DDX47Q9H0S4 AL606517.2-201ENST00000442855 241 ntBASIC1.4□□□□□ -2.19
DDX47Q9H0S4 RPS27P1-201ENST00000450552 247 ntBASIC1.4□□□□□ -2.19
DDX47Q9H0S4 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.4□□□□□ -2.19
DDX47Q9H0S4 RNU7-34P-201ENST00000459394 64 ntBASIC1.4□□□□□ -2.19
DDX47Q9H0S4 AC099513.1-201ENST00000490423 301 ntBASIC1.4□□□□□ -2.19
DDX47Q9H0S4 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.4□□□□□ -2.19
DDX47Q9H0S4 AL121890.5-201ENST00000620848 304 ntBASIC1.4□□□□□ -2.19
DDX47Q9H0S4 MIR3688-2-201ENST00000636963 87 ntBASIC1.4□□□□□ -2.19
DDX47Q9H0S4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.4□□□□□ -2.19
DDX47Q9H0S4 MTND5P35-201ENST00000557537 1720 ntBASIC1.4□□□□□ -2.19
DDX47Q9H0S4 RNU6-1059P-201ENST00000363752 98 ntBASIC1.39□□□□□ -2.19
DDX47Q9H0S4 RNU6-457P-201ENST00000363999 107 ntBASIC1.39□□□□□ -2.19
DDX47Q9H0S4 RNU6-280P-201ENST00000364145 104 ntBASIC1.39□□□□□ -2.19
DDX47Q9H0S4 MIR150-201ENST00000385048 84 ntBASIC1.39□□□□□ -2.19
DDX47Q9H0S4 RPL21P1-201ENST00000399532 476 ntBASIC1.39□□□□□ -2.19
DDX47Q9H0S4 AC004965.1-201ENST00000413033 213 ntBASIC1.39□□□□□ -2.19
DDX47Q9H0S4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.39□□□□□ -2.19
DDX47Q9H0S4 MTND1P17-201ENST00000448961 204 ntBASIC1.39□□□□□ -2.19
DDX47Q9H0S4 AP000870.1-201ENST00000472927 406 ntBASIC1.39□□□□□ -2.19
DDX47Q9H0S4 AC103851.1-201ENST00000506833 274 ntBASIC1.39□□□□□ -2.19
DDX47Q9H0S4 RNU6-566P-201ENST00000516790 107 ntBASIC1.39□□□□□ -2.19
DDX47Q9H0S4 AC134698.4-201ENST00000523451 826 ntBASIC1.39□□□□□ -2.19
DDX47Q9H0S4 AL442163.3-201ENST00000554110 156 ntBASIC1.39□□□□□ -2.19
DDX47Q9H0S4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.39□□□□□ -2.19
DDX47Q9H0S4 MIR4273-201ENST00000582824 84 ntBASIC1.39□□□□□ -2.19
DDX47Q9H0S4 7SK.7-201ENST00000603504 247 ntBASIC1.39□□□□□ -2.19
DDX47Q9H0S4 ZNF299P-201ENST00000406845 1804 ntBASIC1.38□□□□□ -2.19
DDX47Q9H0S4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.38□□□□□ -2.19
DDX47Q9H0S4 SNORD33-201ENST00000362761 85 ntBASIC1.38□□□□□ -2.19
DDX47Q9H0S4 RNU6-595P-201ENST00000363944 107 ntBASIC1.38□□□□□ -2.19
DDX47Q9H0S4 RNU6-1013P-201ENST00000384180 107 ntBASIC1.38□□□□□ -2.19
DDX47Q9H0S4 Y_RNA.453-201ENST00000384223 109 ntBASIC1.38□□□□□ -2.19
DDX47Q9H0S4 RNU6-793P-201ENST00000384233 104 ntBASIC1.38□□□□□ -2.19
DDX47Q9H0S4 MIR10B-201ENST00000385011 110 ntBASIC1.38□□□□□ -2.19
DDX47Q9H0S4 SNORD115-47-201ENST00000391226 86 ntBASIC1.38□□□□□ -2.19
DDX47Q9H0S4 USP9YP30-201ENST00000430729 455 ntBASIC1.38□□□□□ -2.19
DDX47Q9H0S4 AC015922.2-201ENST00000435593 184 ntBASIC1.38□□□□□ -2.19
DDX47Q9H0S4 AL135790.2-201ENST00000437701 267 ntBASIC1.38□□□□□ -2.19
DDX47Q9H0S4 MTND4LP16-201ENST00000440828 295 ntBASIC1.38□□□□□ -2.19
DDX47Q9H0S4 RPS26P45-201ENST00000471748 340 ntBASIC1.38□□□□□ -2.19
DDX47Q9H0S4 RNU7-175P-201ENST00000515915 61 ntBASIC1.38□□□□□ -2.19
DDX47Q9H0S4 AP003033.1-201ENST00000527244 415 ntBASIC1.38□□□□□ -2.19
DDX47Q9H0S4 AL590705.4-201ENST00000532209 134 ntBASIC1.38□□□□□ -2.19
DDX47Q9H0S4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.38□□□□□ -2.19
DDX47Q9H0S4 MIR3937-201ENST00000580135 106 ntBASIC1.38□□□□□ -2.19
DDX47Q9H0S4 AP000942.3-201ENST00000603702 160 ntBASIC1.38□□□□□ -2.19
DDX47Q9H0S4 AL359075.3-201ENST00000613288 217 ntBASIC1.38□□□□□ -2.19
DDX47Q9H0S4 AC090517.2-201ENST00000614966 680 ntBASIC1.38□□□□□ -2.19
DDX47Q9H0S4 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.37□□□□□ -2.19
DDX47Q9H0S4 Y_RNA.405-201ENST00000383979 100 ntBASIC1.37□□□□□ -2.19
DDX47Q9H0S4 SNORD26-201ENST00000384147 75 ntBASIC1.37□□□□□ -2.19
DDX47Q9H0S4 Y_RNA.451-201ENST00000384200 100 ntBASIC1.37□□□□□ -2.19
DDX47Q9H0S4 RNU6-1215P-201ENST00000384441 102 ntBASIC1.37□□□□□ -2.19
DDX47Q9H0S4 Y_RNA.524-201ENST00000384564 100 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms