Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 MIR4303-201ENST00000581299 66 ntBASIC0.86□□□□□ -2.27
SLIRPQ9GZT3 HSPE1P19-201ENST00000603327 295 ntBASIC0.86□□□□□ -2.27
SLIRPQ9GZT3 AL022345.2-201ENST00000606307 135 ntBASIC0.86□□□□□ -2.27
SLIRPQ9GZT3 BX284668.6-201ENST00000606899 438 ntBASIC0.86□□□□□ -2.27
SLIRPQ9GZT3 AL513423.1-201ENST00000621695 132 ntBASIC0.86□□□□□ -2.27
SLIRPQ9GZT3 MTND4P12-201ENST00000498999 1377 ntBASIC0.85□□□□□ -2.27
SLIRPQ9GZT3 RNU6-873P-201ENST00000363833 107 ntBASIC0.85□□□□□ -2.27
SLIRPQ9GZT3 AF228730.1-201ENST00000397972 663 ntBASIC0.85□□□□□ -2.27
SLIRPQ9GZT3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.85□□□□□ -2.27
SLIRPQ9GZT3 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.85□□□□□ -2.27
SLIRPQ9GZT3 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.85□□□□□ -2.27
SLIRPQ9GZT3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.85□□□□□ -2.27
SLIRPQ9GZT3 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.85□□□□□ -2.27
SLIRPQ9GZT3 TRBVA-201ENST00000498804 316 ntBASIC0.85□□□□□ -2.27
SLIRPQ9GZT3 AC019235.1-201ENST00000503847 207 ntBASIC0.85□□□□□ -2.27
SLIRPQ9GZT3 RPL23AP94-201ENST00000512518 302 ntBASIC0.85□□□□□ -2.27
SLIRPQ9GZT3 CYCSP23-201ENST00000519781 313 ntBASIC0.85□□□□□ -2.27
SLIRPQ9GZT3 MIR5695-201ENST00000579717 85 ntBASIC0.85□□□□□ -2.27
SLIRPQ9GZT3 POLR3GP2-201ENST00000588366 668 ntBASIC0.85□□□□□ -2.27
SLIRPQ9GZT3 AC010525.2-201ENST00000590920 195 ntBASIC0.85□□□□□ -2.27
SLIRPQ9GZT3 AL162413.1-201ENST00000603198 110 ntBASIC0.85□□□□□ -2.27
SLIRPQ9GZT3 AL513534.2-201ENST00000603836 250 ntBASIC0.85□□□□□ -2.27
SLIRPQ9GZT3 AL512598.1-201ENST00000610158 273 ntBASIC0.85□□□□□ -2.27
SLIRPQ9GZT3 DISC2.1-201ENST00000612827 205 ntBASIC0.85□□□□□ -2.27
SLIRPQ9GZT3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.85□□□□□ -2.27
SLIRPQ9GZT3 AC099654.12-201ENST00000639868 649 ntBASIC0.85□□□□□ -2.27
SLIRPQ9GZT3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
SLIRPQ9GZT3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
SLIRPQ9GZT3 RNU4-38P-201ENST00000364472 129 ntBASIC0.84□□□□□ -2.27
SLIRPQ9GZT3 AL034345.1-201ENST00000407768 123 ntBASIC0.84□□□□□ -2.27
SLIRPQ9GZT3 RNU6-908P-201ENST00000410160 94 ntBASIC0.84□□□□□ -2.27
SLIRPQ9GZT3 RNU6-1186P-201ENST00000410429 97 ntBASIC0.84□□□□□ -2.27
SLIRPQ9GZT3 OOSP1P1-201ENST00000423265 274 ntBASIC0.84□□□□□ -2.27
SLIRPQ9GZT3 RAB28P5-201ENST00000427490 651 ntBASIC0.84□□□□□ -2.27
SLIRPQ9GZT3 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.84□□□□□ -2.27
SLIRPQ9GZT3 RN7SKP210-201ENST00000459176 261 ntBASIC0.84□□□□□ -2.27
SLIRPQ9GZT3 AC092991.1-201ENST00000477176 376 ntBASIC0.84□□□□□ -2.27
SLIRPQ9GZT3 AC107401.1-201ENST00000503426 685 ntBASIC0.84□□□□□ -2.27
SLIRPQ9GZT3 ZNF519P2-201ENST00000557032 169 ntBASIC0.84□□□□□ -2.27
SLIRPQ9GZT3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.84□□□□□ -2.27
SLIRPQ9GZT3 PIGPP4-201ENST00000584447 307 ntBASIC0.84□□□□□ -2.27
SLIRPQ9GZT3 AL162424.1-201ENST00000602325 221 ntBASIC0.84□□□□□ -2.27
SLIRPQ9GZT3 AL138726.1-201ENST00000614873 333 ntBASIC0.84□□□□□ -2.27
SLIRPQ9GZT3 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.84□□□□□ -2.27
SLIRPQ9GZT3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.84□□□□□ -2.28
SLIRPQ9GZT3 AL391516.1-201ENST00000554380 2449 ntBASIC0.84□□□□□ -2.28
SLIRPQ9GZT3 AP000568.1-201ENST00000282964 442 ntBASIC0.83□□□□□ -2.28
SLIRPQ9GZT3 RNU6-280P-201ENST00000364145 104 ntBASIC0.83□□□□□ -2.28
SLIRPQ9GZT3 Y_RNA.373-201ENST00000365600 103 ntBASIC0.83□□□□□ -2.28
SLIRPQ9GZT3 Y_RNA.415-201ENST00000384012 112 ntBASIC0.83□□□□□ -2.28
SLIRPQ9GZT3 RNU6-17P-201ENST00000384245 107 ntBASIC0.83□□□□□ -2.28
SLIRPQ9GZT3 RNU6-505P-201ENST00000384427 107 ntBASIC0.83□□□□□ -2.28
SLIRPQ9GZT3 RNU6-18P-201ENST00000384527 107 ntBASIC0.83□□□□□ -2.28
SLIRPQ9GZT3 RNU6-159P-201ENST00000391080 106 ntBASIC0.83□□□□□ -2.28
SLIRPQ9GZT3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.83□□□□□ -2.28
SLIRPQ9GZT3 Y_RNA.615-201ENST00000410769 117 ntBASIC0.83□□□□□ -2.28
SLIRPQ9GZT3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.83□□□□□ -2.28
SLIRPQ9GZT3 AL590632.1-201ENST00000424289 371 ntBASIC0.83□□□□□ -2.28
SLIRPQ9GZT3 MTCO3P18-201ENST00000440206 761 ntBASIC0.83□□□□□ -2.28
SLIRPQ9GZT3 DYNLT3P2-201ENST00000442517 295 ntBASIC0.83□□□□□ -2.28
SLIRPQ9GZT3 AC009474.2-201ENST00000451383 136 ntBASIC0.83□□□□□ -2.28
SLIRPQ9GZT3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.83□□□□□ -2.28
SLIRPQ9GZT3 RNU7-66P-201ENST00000459469 62 ntBASIC0.83□□□□□ -2.28
SLIRPQ9GZT3 RNU7-94P-201ENST00000459576 63 ntBASIC0.83□□□□□ -2.28
SLIRPQ9GZT3 HMGN2P26-201ENST00000463169 339 ntBASIC0.83□□□□□ -2.28
SLIRPQ9GZT3 RPL39P28-201ENST00000465655 155 ntBASIC0.83□□□□□ -2.28
SLIRPQ9GZT3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.83□□□□□ -2.28
SLIRPQ9GZT3 RNU6-1281P-201ENST00000516223 105 ntBASIC0.83□□□□□ -2.28
SLIRPQ9GZT3 AC026407.1-201ENST00000518369 204 ntBASIC0.83□□□□□ -2.28
SLIRPQ9GZT3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.83□□□□□ -2.28
SLIRPQ9GZT3 AC073349.3-201ENST00000617616 186 ntBASIC0.83□□□□□ -2.28
SLIRPQ9GZT3 AC009248.2-201ENST00000619826 254 ntBASIC0.83□□□□□ -2.28
SLIRPQ9GZT3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.82□□□□□ -2.28
SLIRPQ9GZT3 RNU6-1266P-201ENST00000362794 105 ntBASIC0.82□□□□□ -2.28
SLIRPQ9GZT3 Y_RNA.135-201ENST00000363439 95 ntBASIC0.82□□□□□ -2.28
SLIRPQ9GZT3 RNU5F-3P-201ENST00000363767 117 ntBASIC0.82□□□□□ -2.28
SLIRPQ9GZT3 RNU6-483P-201ENST00000384088 108 ntBASIC0.82□□□□□ -2.28
SLIRPQ9GZT3 RNU6-793P-201ENST00000384233 104 ntBASIC0.82□□□□□ -2.28
SLIRPQ9GZT3 Y_RNA.530-201ENST00000384587 101 ntBASIC0.82□□□□□ -2.28
SLIRPQ9GZT3 MIR517A-201ENST00000385001 87 ntBASIC0.82□□□□□ -2.28
SLIRPQ9GZT3 MIR660-201ENST00000385235 97 ntBASIC0.82□□□□□ -2.28
SLIRPQ9GZT3 MIR23A-201ENST00000385245 73 ntBASIC0.82□□□□□ -2.28
SLIRPQ9GZT3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.82□□□□□ -2.28
SLIRPQ9GZT3 ZNF885P-201ENST00000420174 1098 ntBASIC0.82□□□□□ -2.28
SLIRPQ9GZT3 Z82205.1-201ENST00000428456 297 ntBASIC0.82□□□□□ -2.28
SLIRPQ9GZT3 MTATP6P17-201ENST00000431030 672 ntBASIC0.82□□□□□ -2.28
SLIRPQ9GZT3 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.82□□□□□ -2.28
SLIRPQ9GZT3 AC091179.3-201ENST00000474761 144 ntBASIC0.82□□□□□ -2.28
SLIRPQ9GZT3 RPL30P10-201ENST00000488148 337 ntBASIC0.82□□□□□ -2.28
SLIRPQ9GZT3 ACA59.1-201ENST00000515966 143 ntBASIC0.82□□□□□ -2.28
SLIRPQ9GZT3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.82□□□□□ -2.28
SLIRPQ9GZT3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.82□□□□□ -2.28
SLIRPQ9GZT3 MIR5696-201ENST00000578474 85 ntBASIC0.82□□□□□ -2.28
SLIRPQ9GZT3 AL021879.1-201ENST00000611756 288 ntBASIC0.82□□□□□ -2.28
SLIRPQ9GZT3 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.82□□□□□ -2.28
SLIRPQ9GZT3 SNORD3E-202ENST00000627253 216 ntBASIC0.82□□□□□ -2.28
SLIRPQ9GZT3 AL133216.2-202ENST00000634512 349 ntBASIC0.82□□□□□ -2.28
SLIRPQ9GZT3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
SLIRPQ9GZT3 RNU6-1252P-201ENST00000363054 104 ntBASIC0.81□□□□□ -2.28
SLIRPQ9GZT3 RNU6-727P-201ENST00000363592 107 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms