Protein–RNA interactions for Protein: Q9C026

TRIM9, E3 ubiquitin-protein ligase TRIM9, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9Q9C026 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
TRIM9Q9C026 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.59□□□□□ -2.15
TRIM9Q9C026 MTND3P10-201ENST00000450967 341 ntBASIC1.59□□□□□ -2.15
TRIM9Q9C026 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.59□□□□□ -2.15
TRIM9Q9C026 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.59□□□□□ -2.15
TRIM9Q9C026 RNA5SP61-201ENST00000516453 100 ntBASIC1.59□□□□□ -2.15
TRIM9Q9C026 AL590705.4-201ENST00000532209 134 ntBASIC1.59□□□□□ -2.15
TRIM9Q9C026 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.59□□□□□ -2.15
TRIM9Q9C026 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.59□□□□□ -2.15
TRIM9Q9C026 7SK.7-201ENST00000603504 247 ntBASIC1.59□□□□□ -2.15
TRIM9Q9C026 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.59□□□□□ -2.15
TRIM9Q9C026 AC009229.3-201ENST00000608056 282 ntBASIC1.59□□□□□ -2.15
TRIM9Q9C026 AC083806.3-201ENST00000614016 455 ntBASIC1.59□□□□□ -2.15
TRIM9Q9C026 AC022513.1-201ENST00000624512 117 ntBASIC1.59□□□□□ -2.15
TRIM9Q9C026 AL159152.1-201ENST00000635019 2587 ntBASIC1.58□□□□□ -2.16
TRIM9Q9C026 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
TRIM9Q9C026 U8.1-201ENST00000362843 134 ntBASIC1.58□□□□□ -2.16
TRIM9Q9C026 RNU6-1305P-201ENST00000364353 104 ntBASIC1.58□□□□□ -2.16
TRIM9Q9C026 Y_RNA.355-201ENST00000365462 98 ntBASIC1.58□□□□□ -2.16
TRIM9Q9C026 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
TRIM9Q9C026 RNU6-17P-201ENST00000384245 107 ntBASIC1.58□□□□□ -2.16
TRIM9Q9C026 RNU6-18P-201ENST00000384527 107 ntBASIC1.58□□□□□ -2.16
TRIM9Q9C026 RNU6-331P-201ENST00000384724 107 ntBASIC1.58□□□□□ -2.16
TRIM9Q9C026 MIR499A-201ENST00000384903 122 ntBASIC1.58□□□□□ -2.16
TRIM9Q9C026 MIR300-201ENST00000401138 83 ntBASIC1.58□□□□□ -2.16
TRIM9Q9C026 MIR320B2-201ENST00000408479 138 ntBASIC1.58□□□□□ -2.16
TRIM9Q9C026 RNU4-14P-201ENST00000410858 122 ntBASIC1.58□□□□□ -2.16
TRIM9Q9C026 RNA5SP100-201ENST00000410903 110 ntBASIC1.58□□□□□ -2.16
TRIM9Q9C026 RNA5SP59-201ENST00000410922 110 ntBASIC1.58□□□□□ -2.16
TRIM9Q9C026 NCOR1P3-201ENST00000420479 303 ntBASIC1.58□□□□□ -2.16
TRIM9Q9C026 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.58□□□□□ -2.16
TRIM9Q9C026 AC245517.4-201ENST00000448601 281 ntBASIC1.58□□□□□ -2.16
TRIM9Q9C026 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.58□□□□□ -2.16
TRIM9Q9C026 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.58□□□□□ -2.16
TRIM9Q9C026 RNU7-175P-201ENST00000515915 61 ntBASIC1.58□□□□□ -2.16
TRIM9Q9C026 SNORA25.14-201ENST00000516481 132 ntBASIC1.58□□□□□ -2.16
TRIM9Q9C026 RNA5SP384-201ENST00000516615 116 ntBASIC1.58□□□□□ -2.16
TRIM9Q9C026 RNA5SP54-201ENST00000516951 92 ntBASIC1.58□□□□□ -2.16
TRIM9Q9C026 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.58□□□□□ -2.16
TRIM9Q9C026 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.58□□□□□ -2.16
TRIM9Q9C026 AL355802.3-201ENST00000607571 545 ntBASIC1.58□□□□□ -2.16
TRIM9Q9C026 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.58□□□□□ -2.16
TRIM9Q9C026 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.58□□□□□ -2.16
TRIM9Q9C026 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.58□□□□□ -2.16
TRIM9Q9C026 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.58□□□□□ -2.16
TRIM9Q9C026 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
TRIM9Q9C026 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.57□□□□□ -2.16
TRIM9Q9C026 RNU6-873P-201ENST00000363833 107 ntBASIC1.57□□□□□ -2.16
TRIM9Q9C026 Y_RNA.404-201ENST00000383978 102 ntBASIC1.57□□□□□ -2.16
TRIM9Q9C026 MIR30A-201ENST00000385092 71 ntBASIC1.57□□□□□ -2.16
TRIM9Q9C026 AC138393.2-201ENST00000414742 246 ntBASIC1.57□□□□□ -2.16
TRIM9Q9C026 AL353997.1-201ENST00000432936 108 ntBASIC1.57□□□□□ -2.16
TRIM9Q9C026 AP000870.1-201ENST00000472927 406 ntBASIC1.57□□□□□ -2.16
TRIM9Q9C026 HMGN2P9-201ENST00000476875 229 ntBASIC1.57□□□□□ -2.16
TRIM9Q9C026 AC005840.1-201ENST00000498412 377 ntBASIC1.57□□□□□ -2.16
TRIM9Q9C026 PRDX4P1-201ENST00000507189 574 ntBASIC1.57□□□□□ -2.16
TRIM9Q9C026 AC097473.1-201ENST00000508142 408 ntBASIC1.57□□□□□ -2.16
TRIM9Q9C026 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.57□□□□□ -2.16
TRIM9Q9C026 Y_RNA.708-201ENST00000516950 96 ntBASIC1.57□□□□□ -2.16
TRIM9Q9C026 RNU6-1213P-201ENST00000517075 94 ntBASIC1.57□□□□□ -2.16
TRIM9Q9C026 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.57□□□□□ -2.16
TRIM9Q9C026 AL359821.1-201ENST00000605519 182 ntBASIC1.57□□□□□ -2.16
TRIM9Q9C026 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.57□□□□□ -2.16
TRIM9Q9C026 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.57□□□□□ -2.16
TRIM9Q9C026 AC022306.2-201ENST00000617563 647 ntBASIC1.57□□□□□ -2.16
TRIM9Q9C026 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.57□□□□□ -2.16
TRIM9Q9C026 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.57□□□□□ -2.16
TRIM9Q9C026 TPTEP1-208ENST00000636884 213 ntBASIC1.57□□□□□ -2.16
TRIM9Q9C026 AC099654.14-201ENST00000638599 341 ntBASIC1.57□□□□□ -2.16
TRIM9Q9C026 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.57□□□□□ -2.16
TRIM9Q9C026 WWP1P1-201ENST00000466609 2769 ntBASIC1.56□□□□□ -2.16
TRIM9Q9C026 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.56□□□□□ -2.16
TRIM9Q9C026 RNU6-222P-201ENST00000362438 107 ntBASIC1.56□□□□□ -2.16
TRIM9Q9C026 RNU6-727P-201ENST00000363592 107 ntBASIC1.56□□□□□ -2.16
TRIM9Q9C026 SNORD115-8-201ENST00000363856 82 ntBASIC1.56□□□□□ -2.16
TRIM9Q9C026 RNU6-593P-201ENST00000364716 112 ntBASIC1.56□□□□□ -2.16
TRIM9Q9C026 SNORD115-38-201ENST00000365037 82 ntBASIC1.56□□□□□ -2.16
TRIM9Q9C026 Y_RNA.482-201ENST00000384377 111 ntBASIC1.56□□□□□ -2.16
TRIM9Q9C026 RNU6-1304P-201ENST00000411374 106 ntBASIC1.56□□□□□ -2.16
TRIM9Q9C026 HSPE1P21-201ENST00000438283 308 ntBASIC1.56□□□□□ -2.16
TRIM9Q9C026 HMGN1P12-201ENST00000499125 195 ntBASIC1.56□□□□□ -2.16
TRIM9Q9C026 TRMT112P2-201ENST00000512910 132 ntBASIC1.56□□□□□ -2.16
TRIM9Q9C026 RNU6-1041P-201ENST00000516254 102 ntBASIC1.56□□□□□ -2.16
TRIM9Q9C026 SNORA20.3-201ENST00000516880 132 ntBASIC1.56□□□□□ -2.16
TRIM9Q9C026 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.56□□□□□ -2.16
TRIM9Q9C026 SUMO2P18-201ENST00000518873 252 ntBASIC1.56□□□□□ -2.16
TRIM9Q9C026 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.56□□□□□ -2.16
TRIM9Q9C026 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.56□□□□□ -2.16
TRIM9Q9C026 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.56□□□□□ -2.16
TRIM9Q9C026 SUB1P4-201ENST00000566062 339 ntBASIC1.56□□□□□ -2.16
TRIM9Q9C026 MIR5094-201ENST00000578766 85 ntBASIC1.56□□□□□ -2.16
TRIM9Q9C026 AC005014.2-201ENST00000607795 599 ntBASIC1.56□□□□□ -2.16
TRIM9Q9C026 MIR8070-201ENST00000616510 88 ntBASIC1.56□□□□□ -2.16
TRIM9Q9C026 PISRT1.1-201ENST00000616930 107 ntBASIC1.56□□□□□ -2.16
TRIM9Q9C026 Y_RNA.166-201ENST00000363730 102 ntBASIC1.55□□□□□ -2.16
TRIM9Q9C026 SNORA25.9-201ENST00000365087 128 ntBASIC1.55□□□□□ -2.16
TRIM9Q9C026 RNU6-975P-201ENST00000384296 105 ntBASIC1.55□□□□□ -2.16
TRIM9Q9C026 SNORA67.2-201ENST00000384300 149 ntBASIC1.55□□□□□ -2.16
TRIM9Q9C026 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
TRIM9Q9C026 RNU6-159P-201ENST00000391080 106 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms