Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.36□□□□□ -2.35
UPF3BQ9BZI7 Y_RNA.549-201ENST00000384657 102 ntBASIC0.36□□□□□ -2.35
UPF3BQ9BZI7 SNORD89-201ENST00000390981 114 ntBASIC0.36□□□□□ -2.35
UPF3BQ9BZI7 RNU6-57P-201ENST00000411348 103 ntBASIC0.36□□□□□ -2.35
UPF3BQ9BZI7 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.36□□□□□ -2.35
UPF3BQ9BZI7 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.36□□□□□ -2.35
UPF3BQ9BZI7 AC004854.1-201ENST00000440356 349 ntBASIC0.36□□□□□ -2.35
UPF3BQ9BZI7 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.36□□□□□ -2.35
UPF3BQ9BZI7 AC025465.4-201ENST00000513422 638 ntBASIC0.36□□□□□ -2.35
UPF3BQ9BZI7 RNU7-99P-201ENST00000516271 62 ntBASIC0.36□□□□□ -2.35
UPF3BQ9BZI7 RNU6-917P-201ENST00000516294 104 ntBASIC0.36□□□□□ -2.35
UPF3BQ9BZI7 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.36□□□□□ -2.35
UPF3BQ9BZI7 MIR6516-201ENST00000630554 81 ntBASIC0.36□□□□□ -2.35
UPF3BQ9BZI7 MTND4P9-201ENST00000507819 1346 ntBASIC0.36□□□□□ -2.35
UPF3BQ9BZI7 RNU6-1305P-201ENST00000364353 104 ntBASIC0.35□□□□□ -2.35
UPF3BQ9BZI7 RNU6-74P-201ENST00000384235 107 ntBASIC0.35□□□□□ -2.35
UPF3BQ9BZI7 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
UPF3BQ9BZI7 MIR1912-201ENST00000410389 80 ntBASIC0.35□□□□□ -2.35
UPF3BQ9BZI7 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.35□□□□□ -2.35
UPF3BQ9BZI7 AC022493.2-201ENST00000506122 481 ntBASIC0.35□□□□□ -2.35
UPF3BQ9BZI7 RNU7-128P-201ENST00000517247 62 ntBASIC0.35□□□□□ -2.35
UPF3BQ9BZI7 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.35□□□□□ -2.35
UPF3BQ9BZI7 AC004223.2-201ENST00000590309 544 ntBASIC0.35□□□□□ -2.35
UPF3BQ9BZI7 AP000907.4-201ENST00000604143 237 ntBASIC0.35□□□□□ -2.35
UPF3BQ9BZI7 AL391903.3-201ENST00000612158 163 ntBASIC0.35□□□□□ -2.35
UPF3BQ9BZI7 Pinc.1-201ENST00000616452 154 ntBASIC0.35□□□□□ -2.35
UPF3BQ9BZI7 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.35□□□□□ -2.35
UPF3BQ9BZI7 AC134026.1-201ENST00000623249 2239 ntBASIC0.34□□□□□ -2.35
UPF3BQ9BZI7 AC090625.1-201ENST00000357130 210 ntBASIC0.34□□□□□ -2.36
UPF3BQ9BZI7 RNU6-266P-201ENST00000364225 107 ntBASIC0.34□□□□□ -2.36
UPF3BQ9BZI7 RNU6-108P-201ENST00000365558 107 ntBASIC0.34□□□□□ -2.36
UPF3BQ9BZI7 Y_RNA.476-201ENST00000384347 108 ntBASIC0.34□□□□□ -2.36
UPF3BQ9BZI7 RNU6-1237P-201ENST00000384777 107 ntBASIC0.34□□□□□ -2.36
UPF3BQ9BZI7 RNU6-1106P-201ENST00000390845 107 ntBASIC0.34□□□□□ -2.36
UPF3BQ9BZI7 SNORD70.1-201ENST00000391007 85 ntBASIC0.34□□□□□ -2.36
UPF3BQ9BZI7 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.34□□□□□ -2.36
UPF3BQ9BZI7 SNORD99-201ENST00000408612 74 ntBASIC0.34□□□□□ -2.36
UPF3BQ9BZI7 AC004866.1-201ENST00000411748 78 ntBASIC0.34□□□□□ -2.36
UPF3BQ9BZI7 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.34□□□□□ -2.36
UPF3BQ9BZI7 AC092423.1-201ENST00000430165 186 ntBASIC0.34□□□□□ -2.36
UPF3BQ9BZI7 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.34□□□□□ -2.36
UPF3BQ9BZI7 GPR143P-201ENST00000434155 205 ntBASIC0.34□□□□□ -2.36
UPF3BQ9BZI7 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.34□□□□□ -2.36
UPF3BQ9BZI7 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.34□□□□□ -2.36
UPF3BQ9BZI7 RNU6-1110P-201ENST00000516462 101 ntBASIC0.34□□□□□ -2.36
UPF3BQ9BZI7 RNU6-344P-201ENST00000516635 111 ntBASIC0.34□□□□□ -2.36
UPF3BQ9BZI7 AP002001.1-203ENST00000534002 267 ntBASIC0.34□□□□□ -2.36
UPF3BQ9BZI7 MIR5589-201ENST00000579442 60 ntBASIC0.34□□□□□ -2.36
UPF3BQ9BZI7 AC002044.1-201ENST00000606707 158 ntBASIC0.34□□□□□ -2.36
UPF3BQ9BZI7 MIR7844-201ENST00000616161 122 ntBASIC0.34□□□□□ -2.36
UPF3BQ9BZI7 RNU6-1127P-201ENST00000384580 107 ntBASIC0.33□□□□□ -2.36
UPF3BQ9BZI7 AL355143.1-201ENST00000407101 841 ntBASIC0.33□□□□□ -2.36
UPF3BQ9BZI7 MIR320B2-201ENST00000408479 138 ntBASIC0.33□□□□□ -2.36
UPF3BQ9BZI7 AC104850.1-201ENST00000435940 476 ntBASIC0.33□□□□□ -2.36
UPF3BQ9BZI7 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.33□□□□□ -2.36
UPF3BQ9BZI7 MTCO3P8-201ENST00000453691 755 ntBASIC0.33□□□□□ -2.36
UPF3BQ9BZI7 LINC01399-202ENST00000458450 244 ntBASIC0.33□□□□□ -2.36
UPF3BQ9BZI7 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.33□□□□□ -2.36
UPF3BQ9BZI7 RNU6-430P-201ENST00000517078 107 ntBASIC0.33□□□□□ -2.36
UPF3BQ9BZI7 SUB1P2-201ENST00000556401 297 ntBASIC0.33□□□□□ -2.36
UPF3BQ9BZI7 BNIP3P39-201ENST00000601077 554 ntBASIC0.33□□□□□ -2.36
UPF3BQ9BZI7 AL133173.2-201ENST00000614270 90 ntBASIC0.33□□□□□ -2.36
UPF3BQ9BZI7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
UPF3BQ9BZI7 AC027807.2-201ENST00000616099 408 ntBASIC0.33□□□□□ -2.36
UPF3BQ9BZI7 U6.73-201ENST00000619194 103 ntBASIC0.33□□□□□ -2.36
UPF3BQ9BZI7 AL078596.1-201ENST00000624856 447 ntBASIC0.33□□□□□ -2.36
UPF3BQ9BZI7 AP000568.1-201ENST00000282964 442 ntBASIC0.32□□□□□ -2.36
UPF3BQ9BZI7 SNORD113-6-201ENST00000363345 75 ntBASIC0.32□□□□□ -2.36
UPF3BQ9BZI7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
UPF3BQ9BZI7 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.32□□□□□ -2.36
UPF3BQ9BZI7 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.32□□□□□ -2.36
UPF3BQ9BZI7 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.32□□□□□ -2.36
UPF3BQ9BZI7 MTATP6P14-201ENST00000455189 673 ntBASIC0.32□□□□□ -2.36
UPF3BQ9BZI7 snoU13.19-201ENST00000459148 104 ntBASIC0.32□□□□□ -2.36
UPF3BQ9BZI7 AC091951.3-201ENST00000504093 246 ntBASIC0.32□□□□□ -2.36
UPF3BQ9BZI7 RNU2-46P-201ENST00000517038 113 ntBASIC0.32□□□□□ -2.36
UPF3BQ9BZI7 MIR4305-201ENST00000583252 102 ntBASIC0.32□□□□□ -2.36
UPF3BQ9BZI7 AC068792.1-201ENST00000621354 417 ntBASIC0.32□□□□□ -2.36
UPF3BQ9BZI7 RNU6-227P-201ENST00000362865 103 ntBASIC0.31□□□□□ -2.36
UPF3BQ9BZI7 RNU6-1029P-201ENST00000384109 107 ntBASIC0.31□□□□□ -2.36
UPF3BQ9BZI7 RNU6-1067P-201ENST00000384752 107 ntBASIC0.31□□□□□ -2.36
UPF3BQ9BZI7 AL606489.2-201ENST00000433886 234 ntBASIC0.31□□□□□ -2.36
UPF3BQ9BZI7 AC093019.1-201ENST00000443135 252 ntBASIC0.31□□□□□ -2.36
UPF3BQ9BZI7 NDUFB4P10-201ENST00000452541 359 ntBASIC0.31□□□□□ -2.36
UPF3BQ9BZI7 RNU7-28P-201ENST00000516759 62 ntBASIC0.31□□□□□ -2.36
UPF3BQ9BZI7 AC022868.1-201ENST00000517767 391 ntBASIC0.31□□□□□ -2.36
UPF3BQ9BZI7 AC027419.1-201ENST00000522976 328 ntBASIC0.31□□□□□ -2.36
UPF3BQ9BZI7 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.31□□□□□ -2.36
UPF3BQ9BZI7 AGGF1P4-201ENST00000568249 801 ntBASIC0.31□□□□□ -2.36
UPF3BQ9BZI7 MIR3682-201ENST00000581338 84 ntBASIC0.31□□□□□ -2.36
UPF3BQ9BZI7 AC096720.1-201ENST00000604441 183 ntBASIC0.31□□□□□ -2.36
UPF3BQ9BZI7 AL158050.2-201ENST00000605336 568 ntBASIC0.31□□□□□ -2.36
UPF3BQ9BZI7 FAM157A-202ENST00000615155 405 ntBASIC0.31□□□□□ -2.36
UPF3BQ9BZI7 RNU6-1286P-201ENST00000383871 107 ntBASIC0.3□□□□□ -2.36
UPF3BQ9BZI7 RNU6-424P-201ENST00000384367 105 ntBASIC0.3□□□□□ -2.36
UPF3BQ9BZI7 MIR122-201ENST00000385044 85 ntBASIC0.3□□□□□ -2.36
UPF3BQ9BZI7 Y_RNA.598-201ENST00000410480 95 ntBASIC0.3□□□□□ -2.36
UPF3BQ9BZI7 AC106883.1-201ENST00000418805 562 ntBASIC0.3□□□□□ -2.36
UPF3BQ9BZI7 MTCO2P12-201ENST00000427426 682 ntBASIC0.3□□□□□ -2.36
UPF3BQ9BZI7 AC002350.1-201ENST00000490759 375 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms