Protein–RNA interactions for Protein: Q9BR84

ZNF559, Zinc finger protein 559, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559Q9BR84 MIR338-201ENST00000636369 67 ntBASIC1.64□□□□□ -2.15
ZNF559Q9BR84 AC068205.3-201ENST00000636385 468 ntBASIC1.64□□□□□ -2.15
ZNF559Q9BR84 AC010615.1-201ENST00000594254 1764 ntBASIC1.64□□□□□ -2.15
ZNF559Q9BR84 Y_RNA.160-201ENST00000363677 92 ntBASIC1.63□□□□□ -2.15
ZNF559Q9BR84 RNU6-873P-201ENST00000363833 107 ntBASIC1.63□□□□□ -2.15
ZNF559Q9BR84 SNORA72.2-201ENST00000365028 127 ntBASIC1.63□□□□□ -2.15
ZNF559Q9BR84 RNU6-767P-201ENST00000384132 107 ntBASIC1.63□□□□□ -2.15
ZNF559Q9BR84 AL627390.1-201ENST00000396055 340 ntBASIC1.63□□□□□ -2.15
ZNF559Q9BR84 MIR934-201ENST00000401241 83 ntBASIC1.63□□□□□ -2.15
ZNF559Q9BR84 MTND1P2-201ENST00000430604 821 ntBASIC1.63□□□□□ -2.15
ZNF559Q9BR84 AC016717.1-201ENST00000448918 286 ntBASIC1.63□□□□□ -2.15
ZNF559Q9BR84 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.63□□□□□ -2.15
ZNF559Q9BR84 RNU6-221P-201ENST00000459541 99 ntBASIC1.63□□□□□ -2.15
ZNF559Q9BR84 AC027575.1-201ENST00000481064 460 ntBASIC1.63□□□□□ -2.15
ZNF559Q9BR84 TRMT112P2-201ENST00000512910 132 ntBASIC1.63□□□□□ -2.15
ZNF559Q9BR84 RNU1-117P-201ENST00000517041 158 ntBASIC1.63□□□□□ -2.15
ZNF559Q9BR84 snoZ196.1-201ENST00000625269 89 ntBASIC1.63□□□□□ -2.15
ZNF559Q9BR84 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.63□□□□□ -2.15
ZNF559Q9BR84 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.63□□□□□ -2.15
ZNF559Q9BR84 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
ZNF559Q9BR84 MTND4P12-201ENST00000498999 1377 ntBASIC1.62□□□□□ -2.15
ZNF559Q9BR84 snoU2-30.2-201ENST00000362805 70 ntBASIC1.62□□□□□ -2.15
ZNF559Q9BR84 SNORA63D-201ENST00000364359 132 ntBASIC1.62□□□□□ -2.15
ZNF559Q9BR84 Y_RNA.405-201ENST00000383979 100 ntBASIC1.62□□□□□ -2.15
ZNF559Q9BR84 Y_RNA.451-201ENST00000384200 100 ntBASIC1.62□□□□□ -2.15
ZNF559Q9BR84 RNU6-601P-201ENST00000384540 107 ntBASIC1.62□□□□□ -2.15
ZNF559Q9BR84 Y_RNA.524-201ENST00000384564 100 ntBASIC1.62□□□□□ -2.15
ZNF559Q9BR84 Y_RNA.561-201ENST00000384694 100 ntBASIC1.62□□□□□ -2.15
ZNF559Q9BR84 AC008134.1-201ENST00000420943 193 ntBASIC1.62□□□□□ -2.15
ZNF559Q9BR84 MTCO3P29-201ENST00000432119 779 ntBASIC1.62□□□□□ -2.15
ZNF559Q9BR84 RPS29P11-201ENST00000496507 171 ntBASIC1.62□□□□□ -2.15
ZNF559Q9BR84 AC026782.1-201ENST00000512952 449 ntBASIC1.62□□□□□ -2.15
ZNF559Q9BR84 RNA5SP481-201ENST00000516814 122 ntBASIC1.62□□□□□ -2.15
ZNF559Q9BR84 RNU7-30P-201ENST00000516835 62 ntBASIC1.62□□□□□ -2.15
ZNF559Q9BR84 Y_RNA.706-201ENST00000516933 99 ntBASIC1.62□□□□□ -2.15
ZNF559Q9BR84 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.62□□□□□ -2.15
ZNF559Q9BR84 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
ZNF559Q9BR84 CBX3P8-201ENST00000532412 525 ntBASIC1.62□□□□□ -2.15
ZNF559Q9BR84 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.62□□□□□ -2.15
ZNF559Q9BR84 AL359821.1-201ENST00000605519 182 ntBASIC1.62□□□□□ -2.15
ZNF559Q9BR84 AC100812.1-201ENST00000607622 580 ntBASIC1.62□□□□□ -2.15
ZNF559Q9BR84 MIR8074-201ENST00000615081 81 ntBASIC1.62□□□□□ -2.15
ZNF559Q9BR84 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
ZNF559Q9BR84 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.62□□□□□ -2.15
ZNF559Q9BR84 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.61□□□□□ -2.15
ZNF559Q9BR84 U3.8-201ENST00000363675 217 ntBASIC1.61□□□□□ -2.15
ZNF559Q9BR84 Y_RNA.279-201ENST00000364763 95 ntBASIC1.61□□□□□ -2.15
ZNF559Q9BR84 SNORA25.9-201ENST00000365087 128 ntBASIC1.61□□□□□ -2.15
ZNF559Q9BR84 Y_RNA.482-201ENST00000384377 111 ntBASIC1.61□□□□□ -2.15
ZNF559Q9BR84 MIR499A-201ENST00000384903 122 ntBASIC1.61□□□□□ -2.15
ZNF559Q9BR84 RNU6-360P-201ENST00000390944 104 ntBASIC1.61□□□□□ -2.15
ZNF559Q9BR84 RNU6-876P-201ENST00000391295 104 ntBASIC1.61□□□□□ -2.15
ZNF559Q9BR84 Y_RNA.594-201ENST00000410373 140 ntBASIC1.61□□□□□ -2.15
ZNF559Q9BR84 RNU6-1050P-201ENST00000410388 107 ntBASIC1.61□□□□□ -2.15
ZNF559Q9BR84 RNU6-57P-201ENST00000411348 103 ntBASIC1.61□□□□□ -2.15
ZNF559Q9BR84 RPL37P10-201ENST00000412884 288 ntBASIC1.61□□□□□ -2.15
ZNF559Q9BR84 AC007098.1-201ENST00000420122 367 ntBASIC1.61□□□□□ -2.15
ZNF559Q9BR84 FTH1P12-201ENST00000432137 551 ntBASIC1.61□□□□□ -2.15
ZNF559Q9BR84 HSPE1P21-201ENST00000438283 308 ntBASIC1.61□□□□□ -2.15
ZNF559Q9BR84 RPL31P58-201ENST00000469001 379 ntBASIC1.61□□□□□ -2.15
ZNF559Q9BR84 Y_RNA.708-201ENST00000516950 96 ntBASIC1.61□□□□□ -2.15
ZNF559Q9BR84 AP003033.1-201ENST00000527244 415 ntBASIC1.61□□□□□ -2.15
ZNF559Q9BR84 AC084364.2-201ENST00000546924 395 ntBASIC1.61□□□□□ -2.15
ZNF559Q9BR84 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.61□□□□□ -2.15
ZNF559Q9BR84 SUB1P3-201ENST00000564581 315 ntBASIC1.61□□□□□ -2.15
ZNF559Q9BR84 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.61□□□□□ -2.15
ZNF559Q9BR84 MIR5701-3-201ENST00000578890 82 ntBASIC1.61□□□□□ -2.15
ZNF559Q9BR84 MIR5701-1-201ENST00000585138 82 ntBASIC1.61□□□□□ -2.15
ZNF559Q9BR84 MIR502-201ENST00000606349 86 ntBASIC1.61□□□□□ -2.15
ZNF559Q9BR84 MIR8081-201ENST00000611533 95 ntBASIC1.61□□□□□ -2.15
ZNF559Q9BR84 MIR5701-2-201ENST00000615634 82 ntBASIC1.61□□□□□ -2.15
ZNF559Q9BR84 AC126177.8-201ENST00000618339 1015 ntBASIC1.61□□□□□ -2.15
ZNF559Q9BR84 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.61□□□□□ -2.15
ZNF559Q9BR84 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.61□□□□□ -2.15
ZNF559Q9BR84 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
ZNF559Q9BR84 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
ZNF559Q9BR84 Y_RNA.2-201ENST00000362330 96 ntBASIC1.6□□□□□ -2.15
ZNF559Q9BR84 RNU6-845P-201ENST00000362578 103 ntBASIC1.6□□□□□ -2.15
ZNF559Q9BR84 Y_RNA.166-201ENST00000363730 102 ntBASIC1.6□□□□□ -2.15
ZNF559Q9BR84 Y_RNA.339-201ENST00000365325 102 ntBASIC1.6□□□□□ -2.15
ZNF559Q9BR84 RNU6-793P-201ENST00000384233 104 ntBASIC1.6□□□□□ -2.15
ZNF559Q9BR84 Y_RNA.508-201ENST00000384502 114 ntBASIC1.6□□□□□ -2.15
ZNF559Q9BR84 MIR9-3-201ENST00000385084 90 ntBASIC1.6□□□□□ -2.15
ZNF559Q9BR84 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
ZNF559Q9BR84 SNORA67.5-201ENST00000391036 107 ntBASIC1.6□□□□□ -2.15
ZNF559Q9BR84 RNU1-139P-201ENST00000391307 165 ntBASIC1.6□□□□□ -2.15
ZNF559Q9BR84 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.6□□□□□ -2.15
ZNF559Q9BR84 HMGN2P34-201ENST00000437647 269 ntBASIC1.6□□□□□ -2.15
ZNF559Q9BR84 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.6□□□□□ -2.15
ZNF559Q9BR84 AP000870.1-201ENST00000472927 406 ntBASIC1.6□□□□□ -2.15
ZNF559Q9BR84 AC005840.1-201ENST00000498412 377 ntBASIC1.6□□□□□ -2.15
ZNF559Q9BR84 AC093303.1-201ENST00000514549 295 ntBASIC1.6□□□□□ -2.15
ZNF559Q9BR84 CBX3P4-201ENST00000538909 354 ntBASIC1.6□□□□□ -2.15
ZNF559Q9BR84 HSBP1P1-201ENST00000555205 166 ntBASIC1.6□□□□□ -2.15
ZNF559Q9BR84 UBL5P4-201ENST00000562584 236 ntBASIC1.6□□□□□ -2.15
ZNF559Q9BR84 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.6□□□□□ -2.15
ZNF559Q9BR84 uc_338.5-201ENST00000611839 155 ntBASIC1.6□□□□□ -2.15
ZNF559Q9BR84 Y_RNA.48-201ENST00000362710 103 ntBASIC1.59□□□□□ -2.15
ZNF559Q9BR84 RNU4-42P-201ENST00000364738 142 ntBASIC1.59□□□□□ -2.15
ZNF559Q9BR84 SNORD48-201ENST00000364953 64 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms