Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 AP000870.1-201ENST00000472927 406 ntBASIC2.08□□□□□ -2.08
RTP3Q9BQQ7 TRMT112P2-201ENST00000512910 132 ntBASIC2.08□□□□□ -2.08
RTP3Q9BQQ7 RNU6-988P-201ENST00000519081 107 ntBASIC2.08□□□□□ -2.08
RTP3Q9BQQ7 AC144568.1-201ENST00000520139 137 ntBASIC2.08□□□□□ -2.08
RTP3Q9BQQ7 DEFB131C-201ENST00000528817 165 ntBASIC2.08□□□□□ -2.08
RTP3Q9BQQ7 AP003072.1-201ENST00000531740 145 ntBASIC2.08□□□□□ -2.08
RTP3Q9BQQ7 MIR3126-201ENST00000577443 74 ntBASIC2.08□□□□□ -2.08
RTP3Q9BQQ7 AL359821.1-201ENST00000605519 182 ntBASIC2.08□□□□□ -2.08
RTP3Q9BQQ7 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.08□□□□□ -2.08
RTP3Q9BQQ7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.08□□□□□ -2.08
RTP3Q9BQQ7 Y_RNA.202-201ENST00000364083 110 ntBASIC2.07□□□□□ -2.08
RTP3Q9BQQ7 RNU4-42P-201ENST00000364738 142 ntBASIC2.07□□□□□ -2.08
RTP3Q9BQQ7 AL355497.1-201ENST00000406262 551 ntBASIC2.07□□□□□ -2.08
RTP3Q9BQQ7 AC114482.1-201ENST00000418010 247 ntBASIC2.07□□□□□ -2.08
RTP3Q9BQQ7 BTF3P4-201ENST00000418852 495 ntBASIC2.07□□□□□ -2.08
RTP3Q9BQQ7 AC009238.1-201ENST00000442165 424 ntBASIC2.07□□□□□ -2.08
RTP3Q9BQQ7 AC009237.6-201ENST00000446969 424 ntBASIC2.07□□□□□ -2.08
RTP3Q9BQQ7 AC107032.1-201ENST00000485945 480 ntBASIC2.07□□□□□ -2.08
RTP3Q9BQQ7 RNU4-77P-201ENST00000516692 156 ntBASIC2.07□□□□□ -2.08
RTP3Q9BQQ7 ANP32BP3-201ENST00000559213 706 ntBASIC2.07□□□□□ -2.08
RTP3Q9BQQ7 UBL5P4-201ENST00000562584 236 ntBASIC2.07□□□□□ -2.08
RTP3Q9BQQ7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.07□□□□□ -2.08
RTP3Q9BQQ7 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.07□□□□□ -2.08
RTP3Q9BQQ7 MIR6840-201ENST00000611937 71 ntBASIC2.07□□□□□ -2.08
RTP3Q9BQQ7 AC083806.3-201ENST00000614016 455 ntBASIC2.07□□□□□ -2.08
RTP3Q9BQQ7 AC138305.3-201ENST00000624988 240 ntBASIC2.07□□□□□ -2.08
RTP3Q9BQQ7 BX322639.1-202ENST00000423987 2213 ntBASIC2.07□□□□□ -2.08
RTP3Q9BQQ7 ZNF204P-201ENST00000416749 2397 ntBASIC2.07□□□□□ -2.08
RTP3Q9BQQ7 AC009487.4-201ENST00000624969 3585 ntBASIC2.06□□□□□ -2.08
RTP3Q9BQQ7 Y_RNA.116-201ENST00000363292 103 ntBASIC2.06□□□□□ -2.08
RTP3Q9BQQ7 SNORA63-201ENST00000363450 132 ntBASIC2.06□□□□□ -2.08
RTP3Q9BQQ7 Y_RNA.148-201ENST00000363557 117 ntBASIC2.06□□□□□ -2.08
RTP3Q9BQQ7 RNU6-137P-201ENST00000363680 108 ntBASIC2.06□□□□□ -2.08
RTP3Q9BQQ7 RNU1-115P-201ENST00000365329 160 ntBASIC2.06□□□□□ -2.08
RTP3Q9BQQ7 SNORA18.2-201ENST00000383865 132 ntBASIC2.06□□□□□ -2.08
RTP3Q9BQQ7 RNU1-148P-201ENST00000384472 162 ntBASIC2.06□□□□□ -2.08
RTP3Q9BQQ7 RNU6-159P-201ENST00000391080 106 ntBASIC2.06□□□□□ -2.08
RTP3Q9BQQ7 Y_RNA.592-201ENST00000410274 109 ntBASIC2.06□□□□□ -2.08
RTP3Q9BQQ7 USP9YP16-201ENST00000430287 407 ntBASIC2.06□□□□□ -2.08
RTP3Q9BQQ7 AC003989.2-201ENST00000440224 169 ntBASIC2.06□□□□□ -2.08
RTP3Q9BQQ7 USP9YP23-201ENST00000455085 407 ntBASIC2.06□□□□□ -2.08
RTP3Q9BQQ7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.06□□□□□ -2.08
RTP3Q9BQQ7 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.06□□□□□ -2.08
RTP3Q9BQQ7 RNU6-1198P-201ENST00000516904 67 ntBASIC2.06□□□□□ -2.08
RTP3Q9BQQ7 RNA5SP54-201ENST00000516951 92 ntBASIC2.06□□□□□ -2.08
RTP3Q9BQQ7 RNU6-667P-201ENST00000517186 102 ntBASIC2.06□□□□□ -2.08
RTP3Q9BQQ7 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.06□□□□□ -2.08
RTP3Q9BQQ7 AL442663.2-201ENST00000554385 511 ntBASIC2.06□□□□□ -2.08
RTP3Q9BQQ7 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.06□□□□□ -2.08
RTP3Q9BQQ7 AC090617.3-201ENST00000573670 475 ntBASIC2.06□□□□□ -2.08
RTP3Q9BQQ7 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.06□□□□□ -2.08
RTP3Q9BQQ7 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.06□□□□□ -2.08
RTP3Q9BQQ7 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.06□□□□□ -2.08
RTP3Q9BQQ7 AC007742.2-201ENST00000618226 398 ntBASIC2.06□□□□□ -2.08
RTP3Q9BQQ7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
RTP3Q9BQQ7 AC099654.10-201ENST00000640395 161 ntBASIC2.06□□□□□ -2.08
RTP3Q9BQQ7 Y_RNA.39-201ENST00000362620 98 ntBASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 Y_RNA.122-201ENST00000363331 96 ntBASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 Y_RNA.326-201ENST00000365176 113 ntBASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 RNU6-234P-201ENST00000365229 104 ntBASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 HMGN2P38-201ENST00000423806 265 ntBASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 MTCO3P8-201ENST00000453691 755 ntBASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 AC025033.1-201ENST00000463883 194 ntBASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 AC005840.1-201ENST00000498412 377 ntBASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 RPL23AP63-201ENST00000498752 471 ntBASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 SNORA25.10-201ENST00000515926 124 ntBASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 RNU7-193P-201ENST00000516723 65 ntBASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 RNU6-1098P-201ENST00000516772 96 ntBASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 RNU2-44P-201ENST00000516795 194 ntBASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 AC034114.1-201ENST00000520293 285 ntBASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 NDUFA5P6-201ENST00000542110 379 ntBASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 AC026470.2-201ENST00000561492 181 ntBASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 MIR3683-201ENST00000580847 82 ntBASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 MIR5694-201ENST00000581190 76 ntBASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 AC016925.2-201ENST00000605108 242 ntBASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 SNORD58B-201ENST00000607313 66 ntBASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 AC005562.2-201ENST00000618264 111 ntBASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 AL606534.2-204ENST00000635008 178 ntBASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 MIR4272-201ENST00000635924 64 ntBASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
RTP3Q9BQQ7 RNU1-76P-201ENST00000362903 159 ntBASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 RNU6-743P-201ENST00000364151 106 ntBASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 RNA5SP190-201ENST00000365222 118 ntBASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 RNU6-611P-201ENST00000384276 104 ntBASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 MIR10B-201ENST00000385011 110 ntBASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 AL590004.1-201ENST00000405321 300 ntBASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 RNA5SP338-201ENST00000410495 85 ntBASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 AC004866.1-201ENST00000411748 78 ntBASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 AC091812.1-201ENST00000432235 1948 ntBASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 AC004386.2-201ENST00000441858 148 ntBASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 MTND4P1-201ENST00000457501 1466 ntBASIC2.04□□□□□ -2.08
RTP3Q9BQQ7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms