Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC012433.1-201ENST00000588916 398 ntBASIC2.64□□□□□ -1.99
VRK1Q99986 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
VRK1Q99986 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.64□□□□□ -1.99
VRK1Q99986 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VRK1Q99986 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
VRK1Q99986 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.63□□□□□ -1.99
VRK1Q99986 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
VRK1Q99986 Y_RNA.111-201ENST00000363248 100 ntBASIC2.63□□□□□ -1.99
VRK1Q99986 RNU6-1235P-201ENST00000384559 107 ntBASIC2.63□□□□□ -1.99
VRK1Q99986 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
VRK1Q99986 SRIP3-201ENST00000413200 219 ntBASIC2.63□□□□□ -1.99
VRK1Q99986 SUMO1P2-201ENST00000452524 304 ntBASIC2.63□□□□□ -1.99
VRK1Q99986 RNU6-498P-201ENST00000459468 107 ntBASIC2.63□□□□□ -1.99
VRK1Q99986 RNU6-155P-201ENST00000516347 100 ntBASIC2.63□□□□□ -1.99
VRK1Q99986 AC037487.3-201ENST00000606668 112 ntBASIC2.63□□□□□ -1.99
VRK1Q99986 IGHVIII-44-202ENST00000636235 289 ntBASIC2.63□□□□□ -1.99
VRK1Q99986 MIR622-201ENST00000638396 96 ntBASIC2.63□□□□□ -1.99
VRK1Q99986 AC135776.4-201ENST00000624300 1904 ntBASIC2.63□□□□□ -1.99
VRK1Q99986 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VRK1Q99986 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VRK1Q99986 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.62□□□□□ -1.99
VRK1Q99986 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
VRK1Q99986 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
VRK1Q99986 RNU6-743P-201ENST00000364151 106 ntBASIC2.62□□□□□ -1.99
VRK1Q99986 Y_RNA.383-201ENST00000383855 97 ntBASIC2.62□□□□□ -1.99
VRK1Q99986 Y_RNA.476-201ENST00000384347 108 ntBASIC2.62□□□□□ -1.99
VRK1Q99986 Y_RNA.478-201ENST00000384358 107 ntBASIC2.62□□□□□ -1.99
VRK1Q99986 Y_RNA.489-201ENST00000384410 101 ntBASIC2.62□□□□□ -1.99
VRK1Q99986 MIR181B1-201ENST00000385240 110 ntBASIC2.62□□□□□ -1.99
VRK1Q99986 MIR548H3-201ENST00000408771 118 ntBASIC2.62□□□□□ -1.99
VRK1Q99986 POLR2KP2-201ENST00000438155 177 ntBASIC2.62□□□□□ -1.99
VRK1Q99986 MTCO1P44-201ENST00000441935 243 ntBASIC2.62□□□□□ -1.99
VRK1Q99986 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.62□□□□□ -1.99
VRK1Q99986 AL357134.1-201ENST00000445848 426 ntBASIC2.62□□□□□ -1.99
VRK1Q99986 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.62□□□□□ -1.99
VRK1Q99986 RNU6-1023P-201ENST00000516137 106 ntBASIC2.62□□□□□ -1.99
VRK1Q99986 AC087441.2-201ENST00000529141 262 ntBASIC2.62□□□□□ -1.99
VRK1Q99986 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.62□□□□□ -1.99
VRK1Q99986 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.62□□□□□ -1.99
VRK1Q99986 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.62□□□□□ -1.99
VRK1Q99986 AC005828.6-201ENST00000606610 232 ntBASIC2.62□□□□□ -1.99
VRK1Q99986 AC090115.4-201ENST00000609970 188 ntBASIC2.62□□□□□ -1.99
VRK1Q99986 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.62□□□□□ -1.99
VRK1Q99986 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.61□□□□□ -1.99
VRK1Q99986 SNORD115-30-201ENST00000364117 82 ntBASIC2.61□□□□□ -1.99
VRK1Q99986 Y_RNA.352-201ENST00000365439 102 ntBASIC2.61□□□□□ -1.99
VRK1Q99986 Y_RNA.361-201ENST00000365515 120 ntBASIC2.61□□□□□ -1.99
VRK1Q99986 AC025750.2-201ENST00000442609 450 ntBASIC2.61□□□□□ -1.99
VRK1Q99986 RPL23AP3-201ENST00000453844 468 ntBASIC2.61□□□□□ -1.99
VRK1Q99986 PRELID3BP1-201ENST00000457142 540 ntBASIC2.61□□□□□ -1.99
VRK1Q99986 RPS29P26-201ENST00000477483 171 ntBASIC2.61□□□□□ -1.99
VRK1Q99986 RPS27AP9-201ENST00000477681 438 ntBASIC2.61□□□□□ -1.99
VRK1Q99986 RN7SL633P-201ENST00000488974 297 ntBASIC2.61□□□□□ -1.99
VRK1Q99986 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.61□□□□□ -1.99
VRK1Q99986 MTND1P19-201ENST00000511780 315 ntBASIC2.61□□□□□ -1.99
VRK1Q99986 RNU6-991P-201ENST00000516168 107 ntBASIC2.61□□□□□ -1.99
VRK1Q99986 RNU6-436P-201ENST00000516171 114 ntBASIC2.61□□□□□ -1.99
VRK1Q99986 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.61□□□□□ -1.99
VRK1Q99986 AC093732.2-201ENST00000607950 274 ntBASIC2.61□□□□□ -1.99
VRK1Q99986 U6.115-201ENST00000636045 103 ntBASIC2.61□□□□□ -1.99
VRK1Q99986 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
VRK1Q99986 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
VRK1Q99986 SNORD114-7-201ENST00000362520 77 ntBASIC2.6□□□□□ -1.99
VRK1Q99986 RNU6-418P-201ENST00000384035 107 ntBASIC2.6□□□□□ -1.99
VRK1Q99986 U3.40-201ENST00000408706 208 ntBASIC2.6□□□□□ -1.99
VRK1Q99986 AC016717.1-201ENST00000448918 286 ntBASIC2.6□□□□□ -1.99
VRK1Q99986 AC010531.2-201ENST00000465012 153 ntBASIC2.6□□□□□ -1.99
VRK1Q99986 RPPH1-2P-201ENST00000516688 293 ntBASIC2.6□□□□□ -1.99
VRK1Q99986 EIF4BP1-201ENST00000554881 351 ntBASIC2.6□□□□□ -1.99
VRK1Q99986 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.6□□□□□ -1.99
VRK1Q99986 MIR7106-201ENST00000612419 65 ntBASIC2.6□□□□□ -1.99
VRK1Q99986 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
VRK1Q99986 Y_RNA.99-201ENST00000363138 105 ntBASIC2.59□□□□□ -1.99
VRK1Q99986 Y_RNA.416-201ENST00000384014 113 ntBASIC2.59□□□□□ -1.99
VRK1Q99986 Y_RNA.418-201ENST00000384029 102 ntBASIC2.59□□□□□ -1.99
VRK1Q99986 SNORA44-201ENST00000384584 132 ntBASIC2.59□□□□□ -1.99
VRK1Q99986 RNU6-57P-201ENST00000411348 103 ntBASIC2.59□□□□□ -1.99
VRK1Q99986 EEF1A1P41-201ENST00000414667 207 ntBASIC2.59□□□□□ -1.99
VRK1Q99986 EDDM3CP-201ENST00000415977 425 ntBASIC2.59□□□□□ -1.99
VRK1Q99986 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.59□□□□□ -1.99
VRK1Q99986 RNU7-26P-201ENST00000458980 63 ntBASIC2.59□□□□□ -1.99
VRK1Q99986 SCGB1D5P-201ENST00000515134 247 ntBASIC2.59□□□□□ -1.99
VRK1Q99986 SCARNA24.2-201ENST00000516968 130 ntBASIC2.59□□□□□ -1.99
VRK1Q99986 MIR3128-201ENST00000581957 66 ntBASIC2.59□□□□□ -1.99
VRK1Q99986 AC025754.2-201ENST00000606491 432 ntBASIC2.59□□□□□ -1.99
VRK1Q99986 AL159152.1-201ENST00000635019 2587 ntBASIC2.58□□□□□ -2
VRK1Q99986 Y_RNA.20-201ENST00000362479 113 ntBASIC2.58□□□□□ -2
VRK1Q99986 SNORA5B-201ENST00000363786 132 ntBASIC2.58□□□□□ -2
VRK1Q99986 RNU6-379P-201ENST00000363813 104 ntBASIC2.58□□□□□ -2
VRK1Q99986 RNU6-1072P-201ENST00000384703 107 ntBASIC2.58□□□□□ -2
VRK1Q99986 RNU6-443P-201ENST00000384780 107 ntBASIC2.58□□□□□ -2
VRK1Q99986 RN7SKP284-201ENST00000411002 343 ntBASIC2.58□□□□□ -2
VRK1Q99986 AC008134.1-201ENST00000420943 193 ntBASIC2.58□□□□□ -2
VRK1Q99986 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.58□□□□□ -2
VRK1Q99986 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.58□□□□□ -2
VRK1Q99986 Y_RNA.680-201ENST00000516441 93 ntBASIC2.58□□□□□ -2
VRK1Q99986 RNU6-826P-201ENST00000516827 104 ntBASIC2.58□□□□□ -2
VRK1Q99986 AC025647.1-201ENST00000517879 253 ntBASIC2.58□□□□□ -2
VRK1Q99986 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.58□□□□□ -2
VRK1Q99986 CYCSP26-201ENST00000534107 320 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms