Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC016909.1-201ENST00000415916 166 ntBASIC-0.48□□□□□ -2.49
IFT140Q96RY7 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.48□□□□□ -2.49
IFT140Q96RY7 AC012306.1-201ENST00000423267 114 ntBASIC-0.48□□□□□ -2.49
IFT140Q96RY7 MED13P1-201ENST00000428342 171 ntBASIC-0.48□□□□□ -2.49
IFT140Q96RY7 RNA5SP94-201ENST00000516917 108 ntBASIC-0.48□□□□□ -2.49
IFT140Q96RY7 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-0.48□□□□□ -2.49
IFT140Q96RY7 MIR5006-201ENST00000583027 110 ntBASIC-0.48□□□□□ -2.49
IFT140Q96RY7 RBM11P1-201ENST00000604951 799 ntBASIC-0.48□□□□□ -2.49
IFT140Q96RY7 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.48□□□□□ -2.49
IFT140Q96RY7 AC008250.2-201ENST00000615261 205 ntBASIC-0.48□□□□□ -2.49
IFT140Q96RY7 RNU6-462P-201ENST00000362659 105 ntBASIC-0.48□□□□□ -2.49
IFT140Q96RY7 RNU6-336P-201ENST00000364891 107 ntBASIC-0.48□□□□□ -2.49
IFT140Q96RY7 SNORD49B-201ENST00000365172 72 ntBASIC-0.48□□□□□ -2.49
IFT140Q96RY7 RNU6-25P-201ENST00000383873 107 ntBASIC-0.48□□□□□ -2.49
IFT140Q96RY7 SNORA36A-201ENST00000384221 132 ntBASIC-0.48□□□□□ -2.49
IFT140Q96RY7 RNU6-929P-201ENST00000384429 107 ntBASIC-0.48□□□□□ -2.49
IFT140Q96RY7 RNU6-15P-201ENST00000384534 107 ntBASIC-0.48□□□□□ -2.49
IFT140Q96RY7 RNU6-29P-201ENST00000384637 107 ntBASIC-0.48□□□□□ -2.49
IFT140Q96RY7 AC008134.1-201ENST00000420943 193 ntBASIC-0.48□□□□□ -2.49
IFT140Q96RY7 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.48□□□□□ -2.49
IFT140Q96RY7 AC079395.1-201ENST00000510981 262 ntBASIC-0.48□□□□□ -2.49
IFT140Q96RY7 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.48□□□□□ -2.49
IFT140Q96RY7 AC025647.1-201ENST00000517879 253 ntBASIC-0.48□□□□□ -2.49
IFT140Q96RY7 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.48□□□□□ -2.49
IFT140Q96RY7 AC005562.2-201ENST00000618264 111 ntBASIC-0.48□□□□□ -2.49
IFT140Q96RY7 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.48□□□□□ -2.49
IFT140Q96RY7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.49□□□□□ -2.49
IFT140Q96RY7 RNU6-1305P-201ENST00000364353 104 ntBASIC-0.49□□□□□ -2.49
IFT140Q96RY7 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.49□□□□□ -2.49
IFT140Q96RY7 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.49□□□□□ -2.49
IFT140Q96RY7 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.49□□□□□ -2.49
IFT140Q96RY7 MRPS10P2-201ENST00000431226 381 ntBASIC-0.49□□□□□ -2.49
IFT140Q96RY7 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.49□□□□□ -2.49
IFT140Q96RY7 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-0.49□□□□□ -2.49
IFT140Q96RY7 AC004386.2-201ENST00000441858 148 ntBASIC-0.49□□□□□ -2.49
IFT140Q96RY7 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.49□□□□□ -2.49
IFT140Q96RY7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.49□□□□□ -2.49
IFT140Q96RY7 AC008628.2-201ENST00000502605 298 ntBASIC-0.49□□□□□ -2.49
IFT140Q96RY7 RNA5SP216-201ENST00000516111 123 ntBASIC-0.49□□□□□ -2.49
IFT140Q96RY7 RN7SKP164-201ENST00000516138 266 ntBASIC-0.49□□□□□ -2.49
IFT140Q96RY7 RNU7-99P-201ENST00000516271 62 ntBASIC-0.49□□□□□ -2.49
IFT140Q96RY7 RNU7-128P-201ENST00000517247 62 ntBASIC-0.49□□□□□ -2.49
IFT140Q96RY7 AP002802.2-201ENST00000605877 235 ntBASIC-0.49□□□□□ -2.49
IFT140Q96RY7 AL139286.2-201ENST00000606838 396 ntBASIC-0.49□□□□□ -2.49
IFT140Q96RY7 AC144521.1-201ENST00000607148 956 ntBASIC-0.49□□□□□ -2.49
IFT140Q96RY7 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.49□□□□□ -2.49
IFT140Q96RY7 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.49□□□□□ -2.49
IFT140Q96RY7 AC093875.1-201ENST00000623688 504 ntBASIC-0.49□□□□□ -2.49
IFT140Q96RY7 RNU6-428P-201ENST00000362942 107 ntBASIC-0.5□□□□□ -2.49
IFT140Q96RY7 RNU6-46P-201ENST00000383860 107 ntBASIC-0.5□□□□□ -2.49
IFT140Q96RY7 SNORA8.2-201ENST00000384372 139 ntBASIC-0.5□□□□□ -2.49
IFT140Q96RY7 MIR526A1-201ENST00000384897 85 ntBASIC-0.5□□□□□ -2.49
IFT140Q96RY7 RNU2-59P-201ENST00000410482 191 ntBASIC-0.5□□□□□ -2.49
IFT140Q96RY7 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.5□□□□□ -2.49
IFT140Q96RY7 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.5□□□□□ -2.49
IFT140Q96RY7 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.5□□□□□ -2.49
IFT140Q96RY7 AL117351.1-201ENST00000438864 766 ntBASIC-0.5□□□□□ -2.49
IFT140Q96RY7 RNA5SP67-201ENST00000516422 131 ntBASIC-0.5□□□□□ -2.49
IFT140Q96RY7 MTATP6P2-201ENST00000603319 678 ntBASIC-0.5□□□□□ -2.49
IFT140Q96RY7 AL445523.1-201ENST00000451184 1362 ntBASIC-0.5□□□□□ -2.49
IFT140Q96RY7 AC073343.1-201ENST00000328239 651 ntBASIC-0.51□□□□□ -2.49
IFT140Q96RY7 Y_RNA.311-201ENST00000365068 96 ntBASIC-0.51□□□□□ -2.49
IFT140Q96RY7 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.51□□□□□ -2.49
IFT140Q96RY7 RNU6-747P-201ENST00000390928 104 ntBASIC-0.51□□□□□ -2.49
IFT140Q96RY7 RNU6-241P-201ENST00000391148 104 ntBASIC-0.51□□□□□ -2.49
IFT140Q96RY7 PCNPP3-201ENST00000393579 471 ntBASIC-0.51□□□□□ -2.49
IFT140Q96RY7 EEF1A1P40-201ENST00000412883 573 ntBASIC-0.51□□□□□ -2.49
IFT140Q96RY7 MTND4LP11-201ENST00000422184 280 ntBASIC-0.51□□□□□ -2.49
IFT140Q96RY7 RNU6-977P-201ENST00000516411 103 ntBASIC-0.51□□□□□ -2.49
IFT140Q96RY7 RN7SKP287-201ENST00000516546 266 ntBASIC-0.51□□□□□ -2.49
IFT140Q96RY7 RNA5SP268-201ENST00000516828 124 ntBASIC-0.51□□□□□ -2.49
IFT140Q96RY7 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.51□□□□□ -2.49
IFT140Q96RY7 AC245297.2-201ENST00000610119 565 ntBASIC-0.51□□□□□ -2.49
IFT140Q96RY7 TCL6_2.1-201ENST00000615162 119 ntBASIC-0.51□□□□□ -2.49
IFT140Q96RY7 SNORD114-12-201ENST00000365400 75 ntBASIC-0.52□□□□□ -2.49
IFT140Q96RY7 RNU6-607P-201ENST00000411283 108 ntBASIC-0.52□□□□□ -2.49
IFT140Q96RY7 AC114491.1-201ENST00000416095 246 ntBASIC-0.52□□□□□ -2.49
IFT140Q96RY7 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-0.52□□□□□ -2.49
IFT140Q96RY7 AC013470.1-201ENST00000453438 462 ntBASIC-0.52□□□□□ -2.49
IFT140Q96RY7 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.52□□□□□ -2.49
IFT140Q96RY7 SNORD4A-201ENST00000459174 72 ntBASIC-0.52□□□□□ -2.49
IFT140Q96RY7 RNU7-51P-201ENST00000516560 62 ntBASIC-0.52□□□□□ -2.49
IFT140Q96RY7 AL596327.1-201ENST00000603629 213 ntBASIC-0.52□□□□□ -2.49
IFT140Q96RY7 AL592221.1-201ENST00000605266 382 ntBASIC-0.52□□□□□ -2.49
IFT140Q96RY7 AC091965.4-201ENST00000607691 587 ntBASIC-0.52□□□□□ -2.49
IFT140Q96RY7 U6.73-201ENST00000619194 103 ntBASIC-0.52□□□□□ -2.49
IFT140Q96RY7 AC068792.1-201ENST00000621354 417 ntBASIC-0.52□□□□□ -2.49
IFT140Q96RY7 snoZ196.1-201ENST00000625269 89 ntBASIC-0.52□□□□□ -2.49
IFT140Q96RY7 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.52□□□□□ -2.49
IFT140Q96RY7 Y_RNA.192-201ENST00000363977 102 ntBASIC-0.53□□□□□ -2.49
IFT140Q96RY7 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.53□□□□□ -2.49
IFT140Q96RY7 RNU6-769P-201ENST00000384407 104 ntBASIC-0.53□□□□□ -2.49
IFT140Q96RY7 SNORA32.3-201ENST00000384772 121 ntBASIC-0.53□□□□□ -2.49
IFT140Q96RY7 MIR106A-201ENST00000384870 81 ntBASIC-0.53□□□□□ -2.49
IFT140Q96RY7 MTND1P32-201ENST00000433043 938 ntBASIC-0.53□□□□□ -2.49
IFT140Q96RY7 USP9YP29-201ENST00000445112 563 ntBASIC-0.53□□□□□ -2.49
IFT140Q96RY7 RNU7-41P-201ENST00000515917 61 ntBASIC-0.53□□□□□ -2.49
IFT140Q96RY7 RNU2-46P-201ENST00000517038 113 ntBASIC-0.53□□□□□ -2.49
IFT140Q96RY7 AK6P2-201ENST00000549020 471 ntBASIC-0.53□□□□□ -2.49
IFT140Q96RY7 MIR544B-201ENST00000582372 78 ntBASIC-0.53□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms