Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
CNTNAP3BQ96NU0 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.92□□□□□ -1.78
CNTNAP3BQ96NU0 Y_RNA.265-201ENST00000364677 108 ntBASIC3.92□□□□□ -1.78
CNTNAP3BQ96NU0 MIR562-201ENST00000384894 95 ntBASIC3.92□□□□□ -1.78
CNTNAP3BQ96NU0 MIR513A2-201ENST00000385249 127 ntBASIC3.92□□□□□ -1.78
CNTNAP3BQ96NU0 AL451046.2-201ENST00000403074 277 ntBASIC3.92□□□□□ -1.78
CNTNAP3BQ96NU0 RPL23AP48-201ENST00000406913 488 ntBASIC3.92□□□□□ -1.78
CNTNAP3BQ96NU0 EIF4EP4-201ENST00000424916 578 ntBASIC3.92□□□□□ -1.78
CNTNAP3BQ96NU0 AC018634.1-201ENST00000437554 401 ntBASIC3.92□□□□□ -1.78
CNTNAP3BQ96NU0 RNU7-23P-201ENST00000459465 62 ntBASIC3.92□□□□□ -1.78
CNTNAP3BQ96NU0 RPL23AP67-201ENST00000465341 474 ntBASIC3.92□□□□□ -1.78
CNTNAP3BQ96NU0 RPL27AP5-201ENST00000469428 449 ntBASIC3.92□□□□□ -1.78
CNTNAP3BQ96NU0 AC093663.1-201ENST00000497190 394 ntBASIC3.92□□□□□ -1.78
CNTNAP3BQ96NU0 RNU6-1149P-201ENST00000516810 97 ntBASIC3.92□□□□□ -1.78
CNTNAP3BQ96NU0 DEFB131E-201ENST00000532329 154 ntBASIC3.92□□□□□ -1.78
CNTNAP3BQ96NU0 AC015912.2-201ENST00000571053 181 ntBASIC3.92□□□□□ -1.78
CNTNAP3BQ96NU0 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.92□□□□□ -1.78
CNTNAP3BQ96NU0 AC002546.1-201ENST00000588041 2504 ntBASIC3.92□□□□□ -1.78
CNTNAP3BQ96NU0 MAPK10-372ENST00000641954 3413 ntBASIC3.92□□□□□ -1.78
CNTNAP3BQ96NU0 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CNTNAP3BQ96NU0 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CNTNAP3BQ96NU0 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNTNAP3BQ96NU0 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.91□□□□□ -1.78
CNTNAP3BQ96NU0 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.91□□□□□ -1.78
CNTNAP3BQ96NU0 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.91□□□□□ -1.78
CNTNAP3BQ96NU0 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNTNAP3BQ96NU0 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CNTNAP3BQ96NU0 RNY3P2-201ENST00000362918 102 ntBASIC3.91□□□□□ -1.78
CNTNAP3BQ96NU0 SNORA38.1-201ENST00000364172 131 ntBASIC3.91□□□□□ -1.78
CNTNAP3BQ96NU0 HSPE1P26-201ENST00000405341 275 ntBASIC3.91□□□□□ -1.78
CNTNAP3BQ96NU0 AC023449.1-201ENST00000454464 154 ntBASIC3.91□□□□□ -1.78
CNTNAP3BQ96NU0 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.91□□□□□ -1.78
CNTNAP3BQ96NU0 RNY4P20-201ENST00000516678 93 ntBASIC3.91□□□□□ -1.78
CNTNAP3BQ96NU0 RNA5SP73-201ENST00000516744 108 ntBASIC3.91□□□□□ -1.78
CNTNAP3BQ96NU0 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.91□□□□□ -1.78
CNTNAP3BQ96NU0 MIR2681-201ENST00000581814 105 ntBASIC3.91□□□□□ -1.78
CNTNAP3BQ96NU0 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.91□□□□□ -1.78
CNTNAP3BQ96NU0 MIR4727-201ENST00000622232 55 ntBASIC3.91□□□□□ -1.78
CNTNAP3BQ96NU0 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CNTNAP3BQ96NU0 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.91□□□□□ -1.78
CNTNAP3BQ96NU0 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNTNAP3BQ96NU0 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNTNAP3BQ96NU0 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CNTNAP3BQ96NU0 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.9□□□□□ -1.78
CNTNAP3BQ96NU0 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.9□□□□□ -1.79
CNTNAP3BQ96NU0 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.9□□□□□ -1.79
CNTNAP3BQ96NU0 RNU6-271P-201ENST00000363858 105 ntBASIC3.9□□□□□ -1.79
CNTNAP3BQ96NU0 Y_RNA.203-201ENST00000364106 102 ntBASIC3.9□□□□□ -1.79
CNTNAP3BQ96NU0 Y_RNA.437-201ENST00000384113 113 ntBASIC3.9□□□□□ -1.79
CNTNAP3BQ96NU0 MIR586-201ENST00000385035 97 ntBASIC3.9□□□□□ -1.79
CNTNAP3BQ96NU0 RNA5SP39-201ENST00000411245 120 ntBASIC3.9□□□□□ -1.79
CNTNAP3BQ96NU0 AC023141.4-201ENST00000412031 328 ntBASIC3.9□□□□□ -1.79
CNTNAP3BQ96NU0 COTL1P1-201ENST00000422309 375 ntBASIC3.9□□□□□ -1.79
CNTNAP3BQ96NU0 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.9□□□□□ -1.79
CNTNAP3BQ96NU0 AC245102.2-201ENST00000448956 180 ntBASIC3.9□□□□□ -1.79
CNTNAP3BQ96NU0 SNRPGP5-201ENST00000456003 220 ntBASIC3.9□□□□□ -1.79
CNTNAP3BQ96NU0 RNA5SP246-201ENST00000458909 119 ntBASIC3.9□□□□□ -1.79
CNTNAP3BQ96NU0 RPS26P48-201ENST00000491713 339 ntBASIC3.9□□□□□ -1.79
CNTNAP3BQ96NU0 RNU6-240P-201ENST00000516098 97 ntBASIC3.9□□□□□ -1.79
CNTNAP3BQ96NU0 RNU6-63P-201ENST00000516690 95 ntBASIC3.9□□□□□ -1.79
CNTNAP3BQ96NU0 AC087499.8-201ENST00000578406 226 ntBASIC3.9□□□□□ -1.79
CNTNAP3BQ96NU0 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.9□□□□□ -1.79
CNTNAP3BQ96NU0 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.9□□□□□ -1.79
CNTNAP3BQ96NU0 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CNTNAP3BQ96NU0 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CNTNAP3BQ96NU0 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CNTNAP3BQ96NU0 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CNTNAP3BQ96NU0 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CNTNAP3BQ96NU0 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CNTNAP3BQ96NU0 AC026241.1-201ENST00000517873 2142 ntBASIC3.89□□□□□ -1.79
CNTNAP3BQ96NU0 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.89□□□□□ -1.79
CNTNAP3BQ96NU0 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.89□□□□□ -1.79
CNTNAP3BQ96NU0 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.89□□□□□ -1.79
CNTNAP3BQ96NU0 RNU6-1210P-201ENST00000363775 107 ntBASIC3.89□□□□□ -1.79
CNTNAP3BQ96NU0 Y_RNA.796-201ENST00000364268 102 ntBASIC3.89□□□□□ -1.79
CNTNAP3BQ96NU0 RNU4-36P-201ENST00000364294 144 ntBASIC3.89□□□□□ -1.79
CNTNAP3BQ96NU0 Y_RNA.799-201ENST00000364992 102 ntBASIC3.89□□□□□ -1.79
CNTNAP3BQ96NU0 MIR490-201ENST00000384865 128 ntBASIC3.89□□□□□ -1.79
CNTNAP3BQ96NU0 RNA5SP511-201ENST00000410487 115 ntBASIC3.89□□□□□ -1.79
CNTNAP3BQ96NU0 RNU2-37P-201ENST00000410695 177 ntBASIC3.89□□□□□ -1.79
CNTNAP3BQ96NU0 RNA5SP120-201ENST00000410900 112 ntBASIC3.89□□□□□ -1.79
CNTNAP3BQ96NU0 RPS3P1-201ENST00000456781 192 ntBASIC3.89□□□□□ -1.79
CNTNAP3BQ96NU0 OR9P1P-201ENST00000496431 281 ntBASIC3.89□□□□□ -1.79
CNTNAP3BQ96NU0 RNU7-61P-201ENST00000515897 61 ntBASIC3.89□□□□□ -1.79
CNTNAP3BQ96NU0 RNA5SP446-201ENST00000515955 82 ntBASIC3.89□□□□□ -1.79
CNTNAP3BQ96NU0 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.89□□□□□ -1.79
CNTNAP3BQ96NU0 AL162726.3-218ENST00000636401 95 ntBASIC3.89□□□□□ -1.79
CNTNAP3BQ96NU0 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.89□□□□□ -1.79
CNTNAP3BQ96NU0 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CNTNAP3BQ96NU0 AC010889.1-201ENST00000566193 2666 ntBASIC3.89□□□□□ -1.79
CNTNAP3BQ96NU0 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CNTNAP3BQ96NU0 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CNTNAP3BQ96NU0 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CNTNAP3BQ96NU0 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CNTNAP3BQ96NU0 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.89□□□□□ -1.79
CNTNAP3BQ96NU0 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.89□□□□□ -1.79
CNTNAP3BQ96NU0 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CNTNAP3BQ96NU0 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.88□□□□□ -1.79
CNTNAP3BQ96NU0 Y_RNA.40-201ENST00000362645 93 ntBASIC3.88□□□□□ -1.79
CNTNAP3BQ96NU0 RNU6-529P-201ENST00000363383 104 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms