Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 RNU6-1272P-201ENST00000362776 107 ntBASIC3.3□□□□□ -1.88
FGD4Q96M96 RNU1-72P-201ENST00000362976 153 ntBASIC3.3□□□□□ -1.88
FGD4Q96M96 RNU6-682P-201ENST00000363843 106 ntBASIC3.3□□□□□ -1.88
FGD4Q96M96 Y_RNA.304-201ENST00000365011 112 ntBASIC3.3□□□□□ -1.88
FGD4Q96M96 Y_RNA.361-201ENST00000365515 120 ntBASIC3.3□□□□□ -1.88
FGD4Q96M96 RNU6-301P-201ENST00000384277 107 ntBASIC3.3□□□□□ -1.88
FGD4Q96M96 RNU6-851P-201ENST00000384565 107 ntBASIC3.3□□□□□ -1.88
FGD4Q96M96 MIR548B-201ENST00000385247 97 ntBASIC3.3□□□□□ -1.88
FGD4Q96M96 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.3□□□□□ -1.88
FGD4Q96M96 U6atac.2-201ENST00000408644 118 ntBASIC3.3□□□□□ -1.88
FGD4Q96M96 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.3□□□□□ -1.88
FGD4Q96M96 AC006483.1-201ENST00000487308 313 ntBASIC3.3□□□□□ -1.88
FGD4Q96M96 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
FGD4Q96M96 RNU6-1098P-201ENST00000516772 96 ntBASIC3.3□□□□□ -1.88
FGD4Q96M96 RNU6-1212P-201ENST00000517023 104 ntBASIC3.3□□□□□ -1.88
FGD4Q96M96 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.3□□□□□ -1.88
FGD4Q96M96 snoU18.1-201ENST00000629629 71 ntBASIC3.3□□□□□ -1.88
FGD4Q96M96 MIR7157-201ENST00000635801 60 ntBASIC3.3□□□□□ -1.88
FGD4Q96M96 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
FGD4Q96M96 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
FGD4Q96M96 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.3□□□□□ -1.88
FGD4Q96M96 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.29□□□□□ -1.88
FGD4Q96M96 RNU6-545P-201ENST00000362681 104 ntBASIC3.29□□□□□ -1.88
FGD4Q96M96 RNU6-47P-201ENST00000383866 107 ntBASIC3.29□□□□□ -1.88
FGD4Q96M96 RNU6-211P-201ENST00000384047 107 ntBASIC3.29□□□□□ -1.88
FGD4Q96M96 Y_RNA.435-201ENST00000384095 112 ntBASIC3.29□□□□□ -1.88
FGD4Q96M96 MIR548M-201ENST00000408260 86 ntBASIC3.29□□□□□ -1.88
FGD4Q96M96 MIR1294-201ENST00000408503 142 ntBASIC3.29□□□□□ -1.88
FGD4Q96M96 RNA5SP184-201ENST00000411071 108 ntBASIC3.29□□□□□ -1.88
FGD4Q96M96 RNA5SP344-201ENST00000411081 104 ntBASIC3.29□□□□□ -1.88
FGD4Q96M96 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.29□□□□□ -1.88
FGD4Q96M96 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
FGD4Q96M96 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.29□□□□□ -1.88
FGD4Q96M96 RN7SL75P-201ENST00000461926 281 ntBASIC3.29□□□□□ -1.88
FGD4Q96M96 SEM1P1-201ENST00000506694 209 ntBASIC3.29□□□□□ -1.88
FGD4Q96M96 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.29□□□□□ -1.88
FGD4Q96M96 RNA5SP217-201ENST00000515959 91 ntBASIC3.29□□□□□ -1.88
FGD4Q96M96 RNU5F-4P-201ENST00000516581 114 ntBASIC3.29□□□□□ -1.88
FGD4Q96M96 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
FGD4Q96M96 AC018630.3-201ENST00000542637 96 ntBASIC3.29□□□□□ -1.88
FGD4Q96M96 AL137100.2-201ENST00000555786 315 ntBASIC3.29□□□□□ -1.88
FGD4Q96M96 AC009127.3-201ENST00000570531 403 ntBASIC3.29□□□□□ -1.88
FGD4Q96M96 MIR3684-201ENST00000579779 74 ntBASIC3.29□□□□□ -1.88
FGD4Q96M96 AL078604.3-201ENST00000615580 211 ntBASIC3.29□□□□□ -1.88
FGD4Q96M96 AC090517.3-201ENST00000625170 141 ntBASIC3.29□□□□□ -1.88
FGD4Q96M96 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.28□□□□□ -1.88
FGD4Q96M96 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
FGD4Q96M96 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.28□□□□□ -1.88
FGD4Q96M96 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
FGD4Q96M96 RNU6-324P-201ENST00000363957 106 ntBASIC3.28□□□□□ -1.88
FGD4Q96M96 Y_RNA.262-201ENST00000364641 102 ntBASIC3.28□□□□□ -1.88
FGD4Q96M96 RNU6-918P-201ENST00000391219 106 ntBASIC3.28□□□□□ -1.88
FGD4Q96M96 MIR300-201ENST00000401138 83 ntBASIC3.28□□□□□ -1.88
FGD4Q96M96 AL031003.1-201ENST00000404229 172 ntBASIC3.28□□□□□ -1.88
FGD4Q96M96 COX6CP10-201ENST00000416832 224 ntBASIC3.28□□□□□ -1.88
FGD4Q96M96 AC140059.1-201ENST00000489238 361 ntBASIC3.28□□□□□ -1.88
FGD4Q96M96 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.28□□□□□ -1.88
FGD4Q96M96 SCARNA3-201ENST00000517097 143 ntBASIC3.28□□□□□ -1.88
FGD4Q96M96 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.28□□□□□ -1.88
FGD4Q96M96 MIR5692C2-201ENST00000577959 77 ntBASIC3.28□□□□□ -1.88
FGD4Q96M96 AL713866.2-201ENST00000603579 219 ntBASIC3.28□□□□□ -1.88
FGD4Q96M96 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.28□□□□□ -1.88
FGD4Q96M96 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.28□□□□□ -1.88
FGD4Q96M96 AL136360.1-201ENST00000503377 1900 ntBASIC3.28□□□□□ -1.88
FGD4Q96M96 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.28□□□□□ -1.88
FGD4Q96M96 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.28□□□□□ -1.88
FGD4Q96M96 FAM35CP-201ENST00000554755 2470 ntBASIC3.28□□□□□ -1.88
FGD4Q96M96 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.28□□□□□ -1.89
FGD4Q96M96 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
FGD4Q96M96 AC103988.1-201ENST00000566382 2177 ntBASIC3.27□□□□□ -1.89
FGD4Q96M96 RNU6-1305P-201ENST00000364353 104 ntBASIC3.27□□□□□ -1.89
FGD4Q96M96 SNORA68.1-201ENST00000364537 132 ntBASIC3.27□□□□□ -1.89
FGD4Q96M96 SNORA9.2-201ENST00000365361 133 ntBASIC3.27□□□□□ -1.89
FGD4Q96M96 RNU6-1274P-201ENST00000384557 107 ntBASIC3.27□□□□□ -1.89
FGD4Q96M96 RNU6-710P-201ENST00000410424 105 ntBASIC3.27□□□□□ -1.89
FGD4Q96M96 RNU6-1328P-201ENST00000410938 106 ntBASIC3.27□□□□□ -1.89
FGD4Q96M96 Z82209.1-201ENST00000422141 2135 ntBASIC3.27□□□□□ -1.89
FGD4Q96M96 OOSP1P1-201ENST00000423265 274 ntBASIC3.27□□□□□ -1.89
FGD4Q96M96 AC087499.2-201ENST00000432861 149 ntBASIC3.27□□□□□ -1.89
FGD4Q96M96 MTND2P29-201ENST00000438595 412 ntBASIC3.27□□□□□ -1.89
FGD4Q96M96 HMGN2P9-201ENST00000476875 229 ntBASIC3.27□□□□□ -1.89
FGD4Q96M96 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.27□□□□□ -1.89
FGD4Q96M96 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.27□□□□□ -1.89
FGD4Q96M96 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.27□□□□□ -1.89
FGD4Q96M96 AL008718.3-201ENST00000610217 321 ntBASIC3.27□□□□□ -1.89
FGD4Q96M96 U6.115-201ENST00000636045 103 ntBASIC3.27□□□□□ -1.89
FGD4Q96M96 U6.106-201ENST00000636360 105 ntBASIC3.27□□□□□ -1.89
FGD4Q96M96 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
FGD4Q96M96 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.26□□□□□ -1.89
FGD4Q96M96 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
FGD4Q96M96 AC110774.1-201ENST00000623567 2018 ntBASIC3.26□□□□□ -1.89
FGD4Q96M96 MIR1185-2-201ENST00000408687 86 ntBASIC3.26□□□□□ -1.89
FGD4Q96M96 RNU2-52P-201ENST00000410680 190 ntBASIC3.26□□□□□ -1.89
FGD4Q96M96 RNU4-61P-201ENST00000411243 107 ntBASIC3.26□□□□□ -1.89
FGD4Q96M96 RPL30P4-201ENST00000429309 333 ntBASIC3.26□□□□□ -1.89
FGD4Q96M96 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.26□□□□□ -1.89
FGD4Q96M96 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.26□□□□□ -1.89
FGD4Q96M96 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.26□□□□□ -1.89
FGD4Q96M96 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.26□□□□□ -1.89
FGD4Q96M96 RNU6-861P-201ENST00000516745 106 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms