Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 MIR3670-1-201ENST00000584160 65 ntBASIC2.62□□□□□ -1.99
CCDC17Q96LX7 MIR3670-3-201ENST00000584855 65 ntBASIC2.62□□□□□ -1.99
CCDC17Q96LX7 AC005357.1-201ENST00000588399 301 ntBASIC2.62□□□□□ -1.99
CCDC17Q96LX7 RPL30P11-203ENST00000598995 310 ntBASIC2.62□□□□□ -1.99
CCDC17Q96LX7 AL356575.1-201ENST00000603008 283 ntBASIC2.62□□□□□ -1.99
CCDC17Q96LX7 MIR3670-4-201ENST00000612260 65 ntBASIC2.62□□□□□ -1.99
CCDC17Q96LX7 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.62□□□□□ -1.99
CCDC17Q96LX7 AC009831.4-201ENST00000620744 325 ntBASIC2.62□□□□□ -1.99
CCDC17Q96LX7 SDR42E1P4-201ENST00000620894 481 ntBASIC2.62□□□□□ -1.99
CCDC17Q96LX7 FO624990.1-201ENST00000636373 85 ntBASIC2.62□□□□□ -1.99
CCDC17Q96LX7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.61□□□□□ -1.99
CCDC17Q96LX7 Y_RNA.60-201ENST00000362831 98 ntBASIC2.61□□□□□ -1.99
CCDC17Q96LX7 RNU6-727P-201ENST00000363592 107 ntBASIC2.61□□□□□ -1.99
CCDC17Q96LX7 SNORA46.1-201ENST00000391069 153 ntBASIC2.61□□□□□ -1.99
CCDC17Q96LX7 RNU4-30P-201ENST00000410245 143 ntBASIC2.61□□□□□ -1.99
CCDC17Q96LX7 Y_RNA.595-201ENST00000410403 105 ntBASIC2.61□□□□□ -1.99
CCDC17Q96LX7 AC027124.2-201ENST00000428249 105 ntBASIC2.61□□□□□ -1.99
CCDC17Q96LX7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC17Q96LX7 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC17Q96LX7 snoU13.26-201ENST00000459452 105 ntBASIC2.61□□□□□ -1.99
CCDC17Q96LX7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC17Q96LX7 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.61□□□□□ -1.99
CCDC17Q96LX7 RNU6-1338P-201ENST00000516328 91 ntBASIC2.61□□□□□ -1.99
CCDC17Q96LX7 RNU6-966P-201ENST00000516479 104 ntBASIC2.61□□□□□ -1.99
CCDC17Q96LX7 DEFB108E-201ENST00000524692 240 ntBASIC2.61□□□□□ -1.99
CCDC17Q96LX7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC17Q96LX7 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC17Q96LX7 AC103810.1-201ENST00000579873 453 ntBASIC2.61□□□□□ -1.99
CCDC17Q96LX7 MIR4423-201ENST00000580922 80 ntBASIC2.61□□□□□ -1.99
CCDC17Q96LX7 AC104984.5-201ENST00000586878 94 ntBASIC2.61□□□□□ -1.99
CCDC17Q96LX7 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC17Q96LX7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC17Q96LX7 AC078938.1-201ENST00000620993 318 ntBASIC2.61□□□□□ -1.99
CCDC17Q96LX7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC17Q96LX7 MIR7515-201ENST00000637837 67 ntBASIC2.61□□□□□ -1.99
CCDC17Q96LX7 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC17Q96LX7 AL391987.6-201ENST00000305671 199 ntBASIC2.6□□□□□ -1.99
CCDC17Q96LX7 U3.9-201ENST00000363823 204 ntBASIC2.6□□□□□ -1.99
CCDC17Q96LX7 Y_RNA.462-201ENST00000384268 102 ntBASIC2.6□□□□□ -1.99
CCDC17Q96LX7 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.6□□□□□ -1.99
CCDC17Q96LX7 AC139712.2-201ENST00000424302 339 ntBASIC2.6□□□□□ -1.99
CCDC17Q96LX7 SUMO1P4-201ENST00000429430 302 ntBASIC2.6□□□□□ -1.99
CCDC17Q96LX7 AC007395.1-201ENST00000451333 677 ntBASIC2.6□□□□□ -1.99
CCDC17Q96LX7 MTND4LP30-201ENST00000454092 297 ntBASIC2.6□□□□□ -1.99
CCDC17Q96LX7 AC073901.1-201ENST00000462471 408 ntBASIC2.6□□□□□ -1.99
CCDC17Q96LX7 Y_RNA.683-201ENST00000516508 93 ntBASIC2.6□□□□□ -1.99
CCDC17Q96LX7 SCARNA11.3-201ENST00000517276 130 ntBASIC2.6□□□□□ -1.99
CCDC17Q96LX7 HSPE1P18-201ENST00000517602 280 ntBASIC2.6□□□□□ -1.99
CCDC17Q96LX7 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC17Q96LX7 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC17Q96LX7 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC17Q96LX7 AC233702.2-202ENST00000562547 291 ntBASIC2.6□□□□□ -1.99
CCDC17Q96LX7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC17Q96LX7 MIR6132-201ENST00000622083 109 ntBASIC2.6□□□□□ -1.99
CCDC17Q96LX7 MIR219B-201ENST00000637023 88 ntBASIC2.6□□□□□ -1.99
CCDC17Q96LX7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC17Q96LX7 AC135776.4-201ENST00000624300 1904 ntBASIC2.6□□□□□ -1.99
CCDC17Q96LX7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.59□□□□□ -1.99
CCDC17Q96LX7 SNORA18.2-201ENST00000383865 132 ntBASIC2.59□□□□□ -1.99
CCDC17Q96LX7 RNU6-245P-201ENST00000384020 107 ntBASIC2.59□□□□□ -1.99
CCDC17Q96LX7 RNU6-1083P-201ENST00000384022 107 ntBASIC2.59□□□□□ -1.99
CCDC17Q96LX7 RNU6-793P-201ENST00000384233 104 ntBASIC2.59□□□□□ -1.99
CCDC17Q96LX7 RNU6-1026P-201ENST00000384465 108 ntBASIC2.59□□□□□ -1.99
CCDC17Q96LX7 SNORA48.3-201ENST00000391081 134 ntBASIC2.59□□□□□ -1.99
CCDC17Q96LX7 AC096920.1-201ENST00000423991 241 ntBASIC2.59□□□□□ -1.99
CCDC17Q96LX7 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC17Q96LX7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC17Q96LX7 AC004386.2-201ENST00000441858 148 ntBASIC2.59□□□□□ -1.99
CCDC17Q96LX7 RPL39P38-201ENST00000467018 153 ntBASIC2.59□□□□□ -1.99
CCDC17Q96LX7 AC140059.1-201ENST00000489238 361 ntBASIC2.59□□□□□ -1.99
CCDC17Q96LX7 SCARNA16.3-201ENST00000516595 184 ntBASIC2.59□□□□□ -1.99
CCDC17Q96LX7 RNU2-44P-201ENST00000516795 194 ntBASIC2.59□□□□□ -1.99
CCDC17Q96LX7 AP002001.1-203ENST00000534002 267 ntBASIC2.59□□□□□ -1.99
CCDC17Q96LX7 AK6P2-201ENST00000549020 471 ntBASIC2.59□□□□□ -1.99
CCDC17Q96LX7 AC018448.1-201ENST00000552843 316 ntBASIC2.59□□□□□ -1.99
CCDC17Q96LX7 SNRPGP20-201ENST00000604477 205 ntBASIC2.59□□□□□ -1.99
CCDC17Q96LX7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC17Q96LX7 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.59□□□□□ -1.99
CCDC17Q96LX7 U6.104-201ENST00000637979 90 ntBASIC2.59□□□□□ -1.99
CCDC17Q96LX7 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC17Q96LX7 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.58□□□□□ -2
CCDC17Q96LX7 RNA5SP393-201ENST00000363423 117 ntBASIC2.58□□□□□ -2
CCDC17Q96LX7 RNU1-51P-201ENST00000365345 176 ntBASIC2.58□□□□□ -2
CCDC17Q96LX7 Y_RNA.539-201ENST00000384635 107 ntBASIC2.58□□□□□ -2
CCDC17Q96LX7 Y_RNA.570-201ENST00000384750 101 ntBASIC2.58□□□□□ -2
CCDC17Q96LX7 SNORA11.4-201ENST00000408823 129 ntBASIC2.58□□□□□ -2
CCDC17Q96LX7 RNA5SP504-201ENST00000410676 117 ntBASIC2.58□□□□□ -2
CCDC17Q96LX7 RPL30P4-201ENST00000429309 333 ntBASIC2.58□□□□□ -2
CCDC17Q96LX7 SCARNA24.2-201ENST00000516968 130 ntBASIC2.58□□□□□ -2
CCDC17Q96LX7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.58□□□□□ -2
CCDC17Q96LX7 AC004486.1-201ENST00000546846 233 ntBASIC2.58□□□□□ -2
CCDC17Q96LX7 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.58□□□□□ -2
CCDC17Q96LX7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.58□□□□□ -2
CCDC17Q96LX7 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.58□□□□□ -2
CCDC17Q96LX7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
CCDC17Q96LX7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
CCDC17Q96LX7 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC17Q96LX7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.58□□□□□ -2
CCDC17Q96LX7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.57□□□□□ -2
CCDC17Q96LX7 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 197.6 ms