Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 Y_RNA.183-201ENST00000363882 113 ntBASIC2.7□□□□□ -1.98
CDK5RAP3Q96JB5 SNORD31B-201ENST00000364977 69 ntBASIC2.7□□□□□ -1.98
CDK5RAP3Q96JB5 MIR300-201ENST00000401138 83 ntBASIC2.7□□□□□ -1.98
CDK5RAP3Q96JB5 RNU2-20P-201ENST00000410425 191 ntBASIC2.7□□□□□ -1.98
CDK5RAP3Q96JB5 RNA5SP270-201ENST00000411361 118 ntBASIC2.7□□□□□ -1.98
CDK5RAP3Q96JB5 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.7□□□□□ -1.98
CDK5RAP3Q96JB5 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.7□□□□□ -1.98
CDK5RAP3Q96JB5 RNA5SP24-201ENST00000516478 95 ntBASIC2.7□□□□□ -1.98
CDK5RAP3Q96JB5 AC021269.2-201ENST00000532318 330 ntBASIC2.7□□□□□ -1.98
CDK5RAP3Q96JB5 MIR3162-201ENST00000581818 82 ntBASIC2.7□□□□□ -1.98
CDK5RAP3Q96JB5 MIR4753-201ENST00000585119 83 ntBASIC2.7□□□□□ -1.98
CDK5RAP3Q96JB5 AC025754.2-201ENST00000606491 432 ntBASIC2.7□□□□□ -1.98
CDK5RAP3Q96JB5 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.7□□□□□ -1.98
CDK5RAP3Q96JB5 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.7□□□□□ -1.98
CDK5RAP3Q96JB5 AC008873.1-201ENST00000625051 138 ntBASIC2.7□□□□□ -1.98
CDK5RAP3Q96JB5 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
CDK5RAP3Q96JB5 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.69□□□□□ -1.98
CDK5RAP3Q96JB5 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CDK5RAP3Q96JB5 Y_RNA.19-201ENST00000362462 99 ntBASIC2.69□□□□□ -1.98
CDK5RAP3Q96JB5 RNU6-626P-201ENST00000363354 107 ntBASIC2.69□□□□□ -1.98
CDK5RAP3Q96JB5 Y_RNA.176-201ENST00000363815 109 ntBASIC2.69□□□□□ -1.98
CDK5RAP3Q96JB5 RNU6-770P-201ENST00000363929 105 ntBASIC2.69□□□□□ -1.98
CDK5RAP3Q96JB5 Y_RNA.276-201ENST00000364732 109 ntBASIC2.69□□□□□ -1.98
CDK5RAP3Q96JB5 RNU6-20P-201ENST00000384106 107 ntBASIC2.69□□□□□ -1.98
CDK5RAP3Q96JB5 MIR586-201ENST00000385035 97 ntBASIC2.69□□□□□ -1.98
CDK5RAP3Q96JB5 MIR634-201ENST00000385208 97 ntBASIC2.69□□□□□ -1.98
CDK5RAP3Q96JB5 RNU6-1109P-201ENST00000391187 107 ntBASIC2.69□□□□□ -1.98
CDK5RAP3Q96JB5 RPL21P1-201ENST00000399532 476 ntBASIC2.69□□□□□ -1.98
CDK5RAP3Q96JB5 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.69□□□□□ -1.98
CDK5RAP3Q96JB5 CR769767.1-201ENST00000436337 346 ntBASIC2.69□□□□□ -1.98
CDK5RAP3Q96JB5 AL513328.1-201ENST00000446460 224 ntBASIC2.69□□□□□ -1.98
CDK5RAP3Q96JB5 HMGN2P9-201ENST00000476875 229 ntBASIC2.69□□□□□ -1.98
CDK5RAP3Q96JB5 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.69□□□□□ -1.98
CDK5RAP3Q96JB5 AK6P2-201ENST00000549020 471 ntBASIC2.69□□□□□ -1.98
CDK5RAP3Q96JB5 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.69□□□□□ -1.98
CDK5RAP3Q96JB5 AC009127.3-201ENST00000570531 403 ntBASIC2.69□□□□□ -1.98
CDK5RAP3Q96JB5 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.69□□□□□ -1.98
CDK5RAP3Q96JB5 PRR13P7-201ENST00000605538 430 ntBASIC2.69□□□□□ -1.98
CDK5RAP3Q96JB5 AC130454.1-201ENST00000622948 401 ntBASIC2.69□□□□□ -1.98
CDK5RAP3Q96JB5 MIR1291-201ENST00000627649 87 ntBASIC2.69□□□□□ -1.98
CDK5RAP3Q96JB5 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CDK5RAP3Q96JB5 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.68□□□□□ -1.98
CDK5RAP3Q96JB5 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.68□□□□□ -1.98
CDK5RAP3Q96JB5 ZNF658B-202ENST00000615961 3375 ntBASIC2.68□□□□□ -1.98
CDK5RAP3Q96JB5 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
CDK5RAP3Q96JB5 Y_RNA.149-201ENST00000363558 117 ntBASIC2.68□□□□□ -1.98
CDK5RAP3Q96JB5 SNORA25.6-201ENST00000364121 118 ntBASIC2.68□□□□□ -1.98
CDK5RAP3Q96JB5 RNU6-937P-201ENST00000384325 106 ntBASIC2.68□□□□□ -1.98
CDK5RAP3Q96JB5 MIR548B-201ENST00000385247 97 ntBASIC2.68□□□□□ -1.98
CDK5RAP3Q96JB5 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CDK5RAP3Q96JB5 RAB28P5-201ENST00000427490 651 ntBASIC2.68□□□□□ -1.98
CDK5RAP3Q96JB5 DYNLT3P2-201ENST00000442517 295 ntBASIC2.68□□□□□ -1.98
CDK5RAP3Q96JB5 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.68□□□□□ -1.98
CDK5RAP3Q96JB5 AC234781.5-201ENST00000508429 271 ntBASIC2.68□□□□□ -1.98
CDK5RAP3Q96JB5 AC026436.1-201ENST00000510537 270 ntBASIC2.68□□□□□ -1.98
CDK5RAP3Q96JB5 RNU7-193P-201ENST00000516723 65 ntBASIC2.68□□□□□ -1.98
CDK5RAP3Q96JB5 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.68□□□□□ -1.98
CDK5RAP3Q96JB5 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.68□□□□□ -1.98
CDK5RAP3Q96JB5 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CDK5RAP3Q96JB5 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.68□□□□□ -1.98
CDK5RAP3Q96JB5 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CDK5RAP3Q96JB5 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CDK5RAP3Q96JB5 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CDK5RAP3Q96JB5 Y_RNA.26-201ENST00000362539 101 ntBASIC2.67□□□□□ -1.98
CDK5RAP3Q96JB5 Y_RNA.47-201ENST00000362697 108 ntBASIC2.67□□□□□ -1.98
CDK5RAP3Q96JB5 Y_RNA.64-201ENST00000362845 102 ntBASIC2.67□□□□□ -1.98
CDK5RAP3Q96JB5 U3.8-201ENST00000363675 217 ntBASIC2.67□□□□□ -1.98
CDK5RAP3Q96JB5 RNU6-806P-201ENST00000365147 105 ntBASIC2.67□□□□□ -1.98
CDK5RAP3Q96JB5 Y_RNA.512-201ENST00000384518 102 ntBASIC2.67□□□□□ -1.98
CDK5RAP3Q96JB5 Y_RNA.574-201ENST00000384766 95 ntBASIC2.67□□□□□ -1.98
CDK5RAP3Q96JB5 RNA5SP181-201ENST00000410246 98 ntBASIC2.67□□□□□ -1.98
CDK5RAP3Q96JB5 EDDM3CP-201ENST00000415977 425 ntBASIC2.67□□□□□ -1.98
CDK5RAP3Q96JB5 AC005002.2-201ENST00000438228 269 ntBASIC2.67□□□□□ -1.98
CDK5RAP3Q96JB5 AL137159.1-201ENST00000452808 512 ntBASIC2.67□□□□□ -1.98
CDK5RAP3Q96JB5 AC016925.1-201ENST00000458303 298 ntBASIC2.67□□□□□ -1.98
CDK5RAP3Q96JB5 AC093259.1-201ENST00000509755 300 ntBASIC2.67□□□□□ -1.98
CDK5RAP3Q96JB5 IGLV3-17-201ENST00000519099 244 ntBASIC2.67□□□□□ -1.98
CDK5RAP3Q96JB5 AC136932.1-201ENST00000574771 208 ntBASIC2.67□□□□□ -1.98
CDK5RAP3Q96JB5 AC067747.1-201ENST00000608026 250 ntBASIC2.67□□□□□ -1.98
CDK5RAP3Q96JB5 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.67□□□□□ -1.98
CDK5RAP3Q96JB5 CTSLP2-204ENST00000629029 392 ntBASIC2.67□□□□□ -1.98
CDK5RAP3Q96JB5 MIR203B-201ENST00000636080 86 ntBASIC2.67□□□□□ -1.98
CDK5RAP3Q96JB5 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
CDK5RAP3Q96JB5 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CDK5RAP3Q96JB5 MIR21-201ENST00000362134 72 ntBASIC2.66□□□□□ -1.98
CDK5RAP3Q96JB5 Y_RNA.105-201ENST00000363182 111 ntBASIC2.66□□□□□ -1.98
CDK5RAP3Q96JB5 SNORA72.2-201ENST00000365028 127 ntBASIC2.66□□□□□ -1.98
CDK5RAP3Q96JB5 RNU1-51P-201ENST00000365345 176 ntBASIC2.66□□□□□ -1.98
CDK5RAP3Q96JB5 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.66□□□□□ -1.98
CDK5RAP3Q96JB5 RNU6-1264P-201ENST00000383891 107 ntBASIC2.66□□□□□ -1.98
CDK5RAP3Q96JB5 Y_RNA.510-201ENST00000384511 114 ntBASIC2.66□□□□□ -1.98
CDK5RAP3Q96JB5 RNA5SP475-201ENST00000410568 110 ntBASIC2.66□□□□□ -1.98
CDK5RAP3Q96JB5 AL731563.1-201ENST00000442202 214 ntBASIC2.66□□□□□ -1.98
CDK5RAP3Q96JB5 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.66□□□□□ -1.98
CDK5RAP3Q96JB5 RNU7-57P-201ENST00000459540 60 ntBASIC2.66□□□□□ -1.98
CDK5RAP3Q96JB5 AC114982.1-201ENST00000469402 321 ntBASIC2.66□□□□□ -1.98
CDK5RAP3Q96JB5 RN7SL636P-201ENST00000497504 294 ntBASIC2.66□□□□□ -1.98
CDK5RAP3Q96JB5 MTCO2P24-201ENST00000515611 426 ntBASIC2.66□□□□□ -1.98
CDK5RAP3Q96JB5 RNU6-1143P-201ENST00000516125 104 ntBASIC2.66□□□□□ -1.98
CDK5RAP3Q96JB5 SNORA31.11-201ENST00000516528 139 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms