Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SNORD116.3-201ENST00000517176 78 ntBASIC1.88□□□□□ -2.11
PDLIM5Q96HC4 AC087441.2-201ENST00000529141 262 ntBASIC1.88□□□□□ -2.11
PDLIM5Q96HC4 GNAI2P1-201ENST00000541815 315 ntBASIC1.88□□□□□ -2.11
PDLIM5Q96HC4 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.88□□□□□ -2.11
PDLIM5Q96HC4 MIR4648-201ENST00000580107 72 ntBASIC1.88□□□□□ -2.11
PDLIM5Q96HC4 AC005786.1-201ENST00000588553 154 ntBASIC1.88□□□□□ -2.11
PDLIM5Q96HC4 AC116312.1-201ENST00000606841 314 ntBASIC1.88□□□□□ -2.11
PDLIM5Q96HC4 MIR1302-2-201ENST00000607096 138 ntBASIC1.88□□□□□ -2.11
PDLIM5Q96HC4 AC100812.1-201ENST00000607622 580 ntBASIC1.88□□□□□ -2.11
PDLIM5Q96HC4 AC007485.1-201ENST00000616755 206 ntBASIC1.88□□□□□ -2.11
PDLIM5Q96HC4 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.88□□□□□ -2.11
PDLIM5Q96HC4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.88□□□□□ -2.11
PDLIM5Q96HC4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 RNU6-137P-201ENST00000363680 108 ntBASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 RNY3P11-201ENST00000364153 102 ntBASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 Y_RNA.326-201ENST00000365176 113 ntBASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 RNU1-115P-201ENST00000365329 160 ntBASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 Y_RNA.364-201ENST00000365532 101 ntBASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 SNORA22B-201ENST00000383876 138 ntBASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 RNU6-1026P-201ENST00000384465 108 ntBASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 Y_RNA.557-201ENST00000384680 107 ntBASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 MIR549A-201ENST00000385268 96 ntBASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 RNU6-1093P-201ENST00000391194 107 ntBASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 MIR208B-201ENST00000401172 77 ntBASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 AL079342.1-201ENST00000401460 267 ntBASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 AC009310.1-201ENST00000414414 451 ntBASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 MCFD2P1-201ENST00000417812 300 ntBASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 AC007098.1-201ENST00000420122 367 ntBASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 AC092423.1-201ENST00000430165 186 ntBASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 MTND4P19-201ENST00000446659 478 ntBASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 U8.22-201ENST00000459141 133 ntBASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 RN7SL274P-201ENST00000492268 272 ntBASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 HMGB3P17-201ENST00000504195 649 ntBASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 Y_RNA.661-201ENST00000516003 99 ntBASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 AC091544.4-201ENST00000555268 342 ntBASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 AC092447.9-201ENST00000603395 144 ntBASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 AC016727.2-201ENST00000603988 621 ntBASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 AL353621.2-201ENST00000605340 133 ntBASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
PDLIM5Q96HC4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.86□□□□□ -2.11
PDLIM5Q96HC4 MTND5P16-201ENST00000460269 1703 ntBASIC1.86□□□□□ -2.11
PDLIM5Q96HC4 Y_RNA.80-201ENST00000362996 102 ntBASIC1.86□□□□□ -2.11
PDLIM5Q96HC4 Y_RNA.148-201ENST00000363557 117 ntBASIC1.86□□□□□ -2.11
PDLIM5Q96HC4 RNU4-42P-201ENST00000364738 142 ntBASIC1.86□□□□□ -2.11
PDLIM5Q96HC4 Y_RNA.314-201ENST00000365114 102 ntBASIC1.86□□□□□ -2.11
PDLIM5Q96HC4 Y_RNA.485-201ENST00000384395 102 ntBASIC1.86□□□□□ -2.11
PDLIM5Q96HC4 RNU6-159P-201ENST00000391080 106 ntBASIC1.86□□□□□ -2.11
PDLIM5Q96HC4 AC096644.2-201ENST00000429278 159 ntBASIC1.86□□□□□ -2.11
PDLIM5Q96HC4 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.86□□□□□ -2.11
PDLIM5Q96HC4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.86□□□□□ -2.11
PDLIM5Q96HC4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.86□□□□□ -2.11
PDLIM5Q96HC4 Y_RNA.706-201ENST00000516933 99 ntBASIC1.86□□□□□ -2.11
PDLIM5Q96HC4 RN7SKP295-201ENST00000517264 153 ntBASIC1.86□□□□□ -2.11
PDLIM5Q96HC4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.86□□□□□ -2.11
PDLIM5Q96HC4 SNORD58B-201ENST00000607313 66 ntBASIC1.86□□□□□ -2.11
PDLIM5Q96HC4 AC006157.1-201ENST00000611750 366 ntBASIC1.86□□□□□ -2.11
PDLIM5Q96HC4 AL590240.4-201ENST00000616908 390 ntBASIC1.86□□□□□ -2.11
PDLIM5Q96HC4 AC099654.10-201ENST00000640395 161 ntBASIC1.86□□□□□ -2.11
PDLIM5Q96HC4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.86□□□□□ -2.11
PDLIM5Q96HC4 BX322639.1-202ENST00000423987 2213 ntBASIC1.86□□□□□ -2.11
PDLIM5Q96HC4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
PDLIM5Q96HC4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
PDLIM5Q96HC4 RNU6-222P-201ENST00000362438 107 ntBASIC1.85□□□□□ -2.11
PDLIM5Q96HC4 Y_RNA.319-201ENST00000365138 92 ntBASIC1.85□□□□□ -2.11
PDLIM5Q96HC4 Y_RNA.358-201ENST00000365491 99 ntBASIC1.85□□□□□ -2.11
PDLIM5Q96HC4 RNU6-281P-201ENST00000384212 103 ntBASIC1.85□□□□□ -2.11
PDLIM5Q96HC4 MIR10B-201ENST00000385011 110 ntBASIC1.85□□□□□ -2.11
PDLIM5Q96HC4 MIR625-201ENST00000385047 85 ntBASIC1.85□□□□□ -2.11
PDLIM5Q96HC4 SNORA69.1-201ENST00000390904 137 ntBASIC1.85□□□□□ -2.11
PDLIM5Q96HC4 Y_RNA.592-201ENST00000410274 109 ntBASIC1.85□□□□□ -2.11
PDLIM5Q96HC4 EIF1P2-201ENST00000428233 350 ntBASIC1.85□□□□□ -2.11
PDLIM5Q96HC4 AL160004.2-201ENST00000432935 350 ntBASIC1.85□□□□□ -2.11
PDLIM5Q96HC4 RNU7-14P-201ENST00000459331 62 ntBASIC1.85□□□□□ -2.11
PDLIM5Q96HC4 AP000870.1-201ENST00000472927 406 ntBASIC1.85□□□□□ -2.11
PDLIM5Q96HC4 RPS23P5-201ENST00000495419 428 ntBASIC1.85□□□□□ -2.11
PDLIM5Q96HC4 YWHAEP4-201ENST00000505390 198 ntBASIC1.85□□□□□ -2.11
PDLIM5Q96HC4 RNU7-4P-201ENST00000516961 62 ntBASIC1.85□□□□□ -2.11
PDLIM5Q96HC4 DEFB131C-201ENST00000528817 165 ntBASIC1.85□□□□□ -2.11
PDLIM5Q96HC4 AP003072.1-201ENST00000531740 145 ntBASIC1.85□□□□□ -2.11
PDLIM5Q96HC4 UBL5P4-201ENST00000562584 236 ntBASIC1.85□□□□□ -2.11
PDLIM5Q96HC4 AC022254.1-201ENST00000567857 235 ntBASIC1.85□□□□□ -2.11
PDLIM5Q96HC4 AC090617.3-201ENST00000573670 475 ntBASIC1.85□□□□□ -2.11
PDLIM5Q96HC4 MIR3169-201ENST00000578032 83 ntBASIC1.85□□□□□ -2.11
PDLIM5Q96HC4 AC022432.1-201ENST00000595739 310 ntBASIC1.85□□□□□ -2.11
PDLIM5Q96HC4 SNRPGP19-201ENST00000603826 189 ntBASIC1.85□□□□□ -2.11
PDLIM5Q96HC4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.85□□□□□ -2.11
PDLIM5Q96HC4 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.85□□□□□ -2.11
PDLIM5Q96HC4 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.85□□□□□ -2.11
PDLIM5Q96HC4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.11
PDLIM5Q96HC4 Y_RNA.202-201ENST00000364083 110 ntBASIC1.84□□□□□ -2.11
PDLIM5Q96HC4 Y_RNA.645-201ENST00000391229 102 ntBASIC1.84□□□□□ -2.11
PDLIM5Q96HC4 RNU1-139P-201ENST00000391307 165 ntBASIC1.84□□□□□ -2.11
PDLIM5Q96HC4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.84□□□□□ -2.11
PDLIM5Q96HC4 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.84□□□□□ -2.11
PDLIM5Q96HC4 RNU7-169P-201ENST00000459456 61 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms