Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RNA5SP181-201ENST00000410246 98 ntBASIC2.59□□□□□ -1.99
ATG4AQ8WYN0 RNA5SP475-201ENST00000410568 110 ntBASIC2.59□□□□□ -1.99
ATG4AQ8WYN0 RPS12P2-201ENST00000439728 269 ntBASIC2.59□□□□□ -1.99
ATG4AQ8WYN0 NDUFB4P10-201ENST00000452541 359 ntBASIC2.59□□□□□ -1.99
ATG4AQ8WYN0 CYP2C59P-201ENST00000457790 269 ntBASIC2.59□□□□□ -1.99
ATG4AQ8WYN0 SNORD109B-201ENST00000458961 67 ntBASIC2.59□□□□□ -1.99
ATG4AQ8WYN0 SNORD109A-201ENST00000459128 67 ntBASIC2.59□□□□□ -1.99
ATG4AQ8WYN0 SNORA59A-201ENST00000459326 152 ntBASIC2.59□□□□□ -1.99
ATG4AQ8WYN0 Y_RNA.673-201ENST00000516306 88 ntBASIC2.59□□□□□ -1.99
ATG4AQ8WYN0 SCARNA24.2-201ENST00000516968 130 ntBASIC2.59□□□□□ -1.99
ATG4AQ8WYN0 MIR3616-201ENST00000584070 92 ntBASIC2.59□□□□□ -1.99
ATG4AQ8WYN0 AC037487.3-201ENST00000606668 112 ntBASIC2.59□□□□□ -1.99
ATG4AQ8WYN0 AC006001.4-201ENST00000622243 395 ntBASIC2.59□□□□□ -1.99
ATG4AQ8WYN0 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.59□□□□□ -1.99
ATG4AQ8WYN0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.59□□□□□ -1.99
ATG4AQ8WYN0 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
ATG4AQ8WYN0 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
ATG4AQ8WYN0 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.58□□□□□ -2
ATG4AQ8WYN0 AC138915.1-201ENST00000565427 1685 ntBASIC2.58□□□□□ -2
ATG4AQ8WYN0 Y_RNA.20-201ENST00000362479 113 ntBASIC2.58□□□□□ -2
ATG4AQ8WYN0 RNU6-859P-201ENST00000362728 107 ntBASIC2.58□□□□□ -2
ATG4AQ8WYN0 U3.8-201ENST00000363675 217 ntBASIC2.58□□□□□ -2
ATG4AQ8WYN0 Y_RNA.552-201ENST00000384665 112 ntBASIC2.58□□□□□ -2
ATG4AQ8WYN0 Y_RNA.569-201ENST00000384749 103 ntBASIC2.58□□□□□ -2
ATG4AQ8WYN0 MIR586-201ENST00000385035 97 ntBASIC2.58□□□□□ -2
ATG4AQ8WYN0 TOMM22P2-201ENST00000430735 237 ntBASIC2.58□□□□□ -2
ATG4AQ8WYN0 AL161788.1-201ENST00000441805 169 ntBASIC2.58□□□□□ -2
ATG4AQ8WYN0 RPL23AP3-201ENST00000453844 468 ntBASIC2.58□□□□□ -2
ATG4AQ8WYN0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.58□□□□□ -2
ATG4AQ8WYN0 RNU2-31P-201ENST00000516954 155 ntBASIC2.58□□□□□ -2
ATG4AQ8WYN0 AC008749.1-201ENST00000597650 306 ntBASIC2.58□□□□□ -2
ATG4AQ8WYN0 AL033523.1-201ENST00000605153 153 ntBASIC2.58□□□□□ -2
ATG4AQ8WYN0 AL137847.3-201ENST00000611521 109 ntBASIC2.58□□□□□ -2
ATG4AQ8WYN0 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.58□□□□□ -2
ATG4AQ8WYN0 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
ATG4AQ8WYN0 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.58□□□□□ -2
ATG4AQ8WYN0 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ATG4AQ8WYN0 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
ATG4AQ8WYN0 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.57□□□□□ -2
ATG4AQ8WYN0 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
ATG4AQ8WYN0 Y_RNA.257-201ENST00000364596 102 ntBASIC2.57□□□□□ -2
ATG4AQ8WYN0 RNA5SP240-201ENST00000365355 128 ntBASIC2.57□□□□□ -2
ATG4AQ8WYN0 Y_RNA.446-201ENST00000384178 104 ntBASIC2.57□□□□□ -2
ATG4AQ8WYN0 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.57□□□□□ -2
ATG4AQ8WYN0 RNU6-220P-201ENST00000390919 107 ntBASIC2.57□□□□□ -2
ATG4AQ8WYN0 AL603910.2-201ENST00000407268 136 ntBASIC2.57□□□□□ -2
ATG4AQ8WYN0 RNU2-54P-201ENST00000410299 190 ntBASIC2.57□□□□□ -2
ATG4AQ8WYN0 AL513477.1-202ENST00000417061 214 ntBASIC2.57□□□□□ -2
ATG4AQ8WYN0 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.57□□□□□ -2
ATG4AQ8WYN0 POLR2KP2-201ENST00000438155 177 ntBASIC2.57□□□□□ -2
ATG4AQ8WYN0 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.57□□□□□ -2
ATG4AQ8WYN0 AC107083.1-201ENST00000439643 279 ntBASIC2.57□□□□□ -2
ATG4AQ8WYN0 AC025750.2-201ENST00000442609 450 ntBASIC2.57□□□□□ -2
ATG4AQ8WYN0 EEF1B2P7-201ENST00000451177 676 ntBASIC2.57□□□□□ -2
ATG4AQ8WYN0 RNU7-14P-201ENST00000459331 62 ntBASIC2.57□□□□□ -2
ATG4AQ8WYN0 HMGN2P9-201ENST00000476875 229 ntBASIC2.57□□□□□ -2
ATG4AQ8WYN0 CKS1BP2-201ENST00000497342 240 ntBASIC2.57□□□□□ -2
ATG4AQ8WYN0 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.57□□□□□ -2
ATG4AQ8WYN0 RNU6-966P-201ENST00000516479 104 ntBASIC2.57□□□□□ -2
ATG4AQ8WYN0 AC109329.2-201ENST00000519658 482 ntBASIC2.57□□□□□ -2
ATG4AQ8WYN0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
ATG4AQ8WYN0 AC010900.2-201ENST00000604508 210 ntBASIC2.57□□□□□ -2
ATG4AQ8WYN0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
ATG4AQ8WYN0 MIR7106-201ENST00000612419 65 ntBASIC2.57□□□□□ -2
ATG4AQ8WYN0 U2.14-201ENST00000615943 113 ntBASIC2.57□□□□□ -2
ATG4AQ8WYN0 AC078938.1-201ENST00000620993 318 ntBASIC2.57□□□□□ -2
ATG4AQ8WYN0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.57□□□□□ -2
ATG4AQ8WYN0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ATG4AQ8WYN0 RNU6-1266P-201ENST00000362794 105 ntBASIC2.56□□□□□ -2
ATG4AQ8WYN0 Y_RNA.136-201ENST00000363444 102 ntBASIC2.56□□□□□ -2
ATG4AQ8WYN0 SNORD27-201ENST00000363981 72 ntBASIC2.56□□□□□ -2
ATG4AQ8WYN0 RNU6-1305P-201ENST00000364353 104 ntBASIC2.56□□□□□ -2
ATG4AQ8WYN0 RNU1-51P-201ENST00000365345 176 ntBASIC2.56□□□□□ -2
ATG4AQ8WYN0 Y_RNA.383-201ENST00000383855 97 ntBASIC2.56□□□□□ -2
ATG4AQ8WYN0 RNU6-1026P-201ENST00000384465 108 ntBASIC2.56□□□□□ -2
ATG4AQ8WYN0 MIR300-201ENST00000401138 83 ntBASIC2.56□□□□□ -2
ATG4AQ8WYN0 MIR1283-1-201ENST00000408494 87 ntBASIC2.56□□□□□ -2
ATG4AQ8WYN0 RNU2-63P-201ENST00000410792 194 ntBASIC2.56□□□□□ -2
ATG4AQ8WYN0 RNU6-1199P-201ENST00000411249 104 ntBASIC2.56□□□□□ -2
ATG4AQ8WYN0 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.56□□□□□ -2
ATG4AQ8WYN0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.56□□□□□ -2
ATG4AQ8WYN0 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.56□□□□□ -2
ATG4AQ8WYN0 AC096725.1-201ENST00000514266 313 ntBASIC2.56□□□□□ -2
ATG4AQ8WYN0 RNU6-155P-201ENST00000516347 100 ntBASIC2.56□□□□□ -2
ATG4AQ8WYN0 SNORA48.11-201ENST00000517015 89 ntBASIC2.56□□□□□ -2
ATG4AQ8WYN0 AL356280.1-201ENST00000603614 379 ntBASIC2.56□□□□□ -2
ATG4AQ8WYN0 AC141273.2-201ENST00000618989 130 ntBASIC2.56□□□□□ -2
ATG4AQ8WYN0 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.56□□□□□ -2
ATG4AQ8WYN0 SNORA25.1-201ENST00000362326 128 ntBASIC2.55□□□□□ -2
ATG4AQ8WYN0 RNU6-454P-201ENST00000364292 107 ntBASIC2.55□□□□□ -2
ATG4AQ8WYN0 RNU6-546P-201ENST00000383991 107 ntBASIC2.55□□□□□ -2
ATG4AQ8WYN0 Y_RNA.418-201ENST00000384029 102 ntBASIC2.55□□□□□ -2
ATG4AQ8WYN0 MIR548B-201ENST00000385247 97 ntBASIC2.55□□□□□ -2
ATG4AQ8WYN0 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.55□□□□□ -2
ATG4AQ8WYN0 AC009963.1-201ENST00000417265 157 ntBASIC2.55□□□□□ -2
ATG4AQ8WYN0 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.55□□□□□ -2
ATG4AQ8WYN0 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.55□□□□□ -2
ATG4AQ8WYN0 ATP5EP1-201ENST00000510257 156 ntBASIC2.55□□□□□ -2
ATG4AQ8WYN0 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.55□□□□□ -2
ATG4AQ8WYN0 RNA5SP320-201ENST00000516263 124 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms