Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
TMEM116Q8NCL8 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
TMEM116Q8NCL8 MIR410-201ENST00000362222 80 ntBASIC1.93□□□□□ -2.1
TMEM116Q8NCL8 RNU6-1019P-201ENST00000364424 107 ntBASIC1.93□□□□□ -2.1
TMEM116Q8NCL8 SNORA72.2-201ENST00000365028 127 ntBASIC1.93□□□□□ -2.1
TMEM116Q8NCL8 Y_RNA.496-201ENST00000384444 101 ntBASIC1.93□□□□□ -2.1
TMEM116Q8NCL8 RNU6-417P-201ENST00000384712 107 ntBASIC1.93□□□□□ -2.1
TMEM116Q8NCL8 FCF1P4-201ENST00000448326 183 ntBASIC1.93□□□□□ -2.1
TMEM116Q8NCL8 HMGN1P13-201ENST00000505795 138 ntBASIC1.93□□□□□ -2.1
TMEM116Q8NCL8 MRPS17P9-201ENST00000511924 393 ntBASIC1.93□□□□□ -2.1
TMEM116Q8NCL8 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.93□□□□□ -2.1
TMEM116Q8NCL8 RNA5SP356-201ENST00000515972 94 ntBASIC1.93□□□□□ -2.1
TMEM116Q8NCL8 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.93□□□□□ -2.1
TMEM116Q8NCL8 AC008749.1-201ENST00000597650 306 ntBASIC1.93□□□□□ -2.1
TMEM116Q8NCL8 AL033523.1-201ENST00000605153 153 ntBASIC1.93□□□□□ -2.1
TMEM116Q8NCL8 AL160413.1-201ENST00000622780 310 ntBASIC1.93□□□□□ -2.1
TMEM116Q8NCL8 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
TMEM116Q8NCL8 AC062016.1-201ENST00000355719 319 ntBASIC1.92□□□□□ -2.1
TMEM116Q8NCL8 Y_RNA.112-201ENST00000363250 102 ntBASIC1.92□□□□□ -2.1
TMEM116Q8NCL8 Y_RNA.535-201ENST00000384612 99 ntBASIC1.92□□□□□ -2.1
TMEM116Q8NCL8 RNA5SP475-201ENST00000410568 110 ntBASIC1.92□□□□□ -2.1
TMEM116Q8NCL8 AC018865.2-201ENST00000423631 129 ntBASIC1.92□□□□□ -2.1
TMEM116Q8NCL8 RAB28P5-201ENST00000427490 651 ntBASIC1.92□□□□□ -2.1
TMEM116Q8NCL8 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.92□□□□□ -2.1
TMEM116Q8NCL8 CR769767.1-201ENST00000436337 346 ntBASIC1.92□□□□□ -2.1
TMEM116Q8NCL8 AC069257.2-201ENST00000441819 155 ntBASIC1.92□□□□□ -2.1
TMEM116Q8NCL8 CHEK2P4-201ENST00000450340 246 ntBASIC1.92□□□□□ -2.1
TMEM116Q8NCL8 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.92□□□□□ -2.1
TMEM116Q8NCL8 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.92□□□□□ -2.1
TMEM116Q8NCL8 MIR4713-201ENST00000582691 75 ntBASIC1.92□□□□□ -2.1
TMEM116Q8NCL8 AC067747.1-201ENST00000608026 250 ntBASIC1.92□□□□□ -2.1
TMEM116Q8NCL8 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.92□□□□□ -2.1
TMEM116Q8NCL8 MIR3674-201ENST00000636576 68 ntBASIC1.92□□□□□ -2.1
TMEM116Q8NCL8 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
TMEM116Q8NCL8 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
TMEM116Q8NCL8 Y_RNA.27-201ENST00000362540 103 ntBASIC1.91□□□□□ -2.1
TMEM116Q8NCL8 Y_RNA.287-201ENST00000364853 94 ntBASIC1.91□□□□□ -2.1
TMEM116Q8NCL8 Y_RNA.395-201ENST00000383945 109 ntBASIC1.91□□□□□ -2.1
TMEM116Q8NCL8 RNU6-926P-201ENST00000384075 107 ntBASIC1.91□□□□□ -2.1
TMEM116Q8NCL8 RNU6-1310P-201ENST00000384153 107 ntBASIC1.91□□□□□ -2.1
TMEM116Q8NCL8 MIR23A-201ENST00000385245 73 ntBASIC1.91□□□□□ -2.1
TMEM116Q8NCL8 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
TMEM116Q8NCL8 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.91□□□□□ -2.1
TMEM116Q8NCL8 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.91□□□□□ -2.1
TMEM116Q8NCL8 Y_RNA.639-201ENST00000458981 102 ntBASIC1.91□□□□□ -2.1
TMEM116Q8NCL8 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.91□□□□□ -2.1
TMEM116Q8NCL8 RNU6-408P-201ENST00000515910 100 ntBASIC1.91□□□□□ -2.1
TMEM116Q8NCL8 AC023442.1-201ENST00000531247 422 ntBASIC1.91□□□□□ -2.1
TMEM116Q8NCL8 AL137100.2-201ENST00000555786 315 ntBASIC1.91□□□□□ -2.1
TMEM116Q8NCL8 AC022254.1-201ENST00000567857 235 ntBASIC1.91□□□□□ -2.1
TMEM116Q8NCL8 AL096840.1-201ENST00000603287 93 ntBASIC1.91□□□□□ -2.1
TMEM116Q8NCL8 AC010900.2-201ENST00000604508 210 ntBASIC1.91□□□□□ -2.1
TMEM116Q8NCL8 AL606534.2-204ENST00000635008 178 ntBASIC1.91□□□□□ -2.1
TMEM116Q8NCL8 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
TMEM116Q8NCL8 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
TMEM116Q8NCL8 AC010615.1-201ENST00000594254 1764 ntBASIC1.9□□□□□ -2.1
TMEM116Q8NCL8 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
TMEM116Q8NCL8 MTND4P29-201ENST00000503122 1372 ntBASIC1.9□□□□□ -2.11
TMEM116Q8NCL8 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
TMEM116Q8NCL8 RNU6-112P-201ENST00000363599 104 ntBASIC1.9□□□□□ -2.11
TMEM116Q8NCL8 SNORD114-30-201ENST00000364448 72 ntBASIC1.9□□□□□ -2.11
TMEM116Q8NCL8 SNORD42.2-201ENST00000365570 69 ntBASIC1.9□□□□□ -2.11
TMEM116Q8NCL8 MIR520A-201ENST00000384862 85 ntBASIC1.9□□□□□ -2.11
TMEM116Q8NCL8 EBAG9P1-201ENST00000418955 543 ntBASIC1.9□□□□□ -2.11
TMEM116Q8NCL8 AC245047.4-201ENST00000433189 144 ntBASIC1.9□□□□□ -2.11
TMEM116Q8NCL8 AC018634.1-201ENST00000437554 401 ntBASIC1.9□□□□□ -2.11
TMEM116Q8NCL8 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.9□□□□□ -2.11
TMEM116Q8NCL8 AL137792.2-201ENST00000443484 235 ntBASIC1.9□□□□□ -2.11
TMEM116Q8NCL8 AC010409.1-201ENST00000487382 476 ntBASIC1.9□□□□□ -2.11
TMEM116Q8NCL8 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.9□□□□□ -2.11
TMEM116Q8NCL8 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.9□□□□□ -2.11
TMEM116Q8NCL8 RNU6-1012P-201ENST00000516606 109 ntBASIC1.9□□□□□ -2.11
TMEM116Q8NCL8 RNU4-77P-201ENST00000516692 156 ntBASIC1.9□□□□□ -2.11
TMEM116Q8NCL8 MIR514B-201ENST00000516774 80 ntBASIC1.9□□□□□ -2.11
TMEM116Q8NCL8 AC024995.1-201ENST00000523014 93 ntBASIC1.9□□□□□ -2.11
TMEM116Q8NCL8 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.9□□□□□ -2.11
TMEM116Q8NCL8 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.9□□□□□ -2.11
TMEM116Q8NCL8 AC084364.2-201ENST00000546924 395 ntBASIC1.9□□□□□ -2.11
TMEM116Q8NCL8 SNRPGP18-201ENST00000553000 214 ntBASIC1.9□□□□□ -2.11
TMEM116Q8NCL8 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.9□□□□□ -2.11
TMEM116Q8NCL8 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.9□□□□□ -2.11
TMEM116Q8NCL8 SNORD53-201ENST00000579969 78 ntBASIC1.9□□□□□ -2.11
TMEM116Q8NCL8 uc_338.22-201ENST00000622722 187 ntBASIC1.9□□□□□ -2.11
TMEM116Q8NCL8 AC006435.5-201ENST00000624486 112 ntBASIC1.9□□□□□ -2.11
TMEM116Q8NCL8 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
TMEM116Q8NCL8 AC016717.2-201ENST00000609089 5141 ntBASIC1.9□□□□□ -2.11
TMEM116Q8NCL8 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
TMEM116Q8NCL8 MIR369-201ENST00000362155 70 ntBASIC1.89□□□□□ -2.11
TMEM116Q8NCL8 RNY1P14-201ENST00000384426 108 ntBASIC1.89□□□□□ -2.11
TMEM116Q8NCL8 SNORA80E-201ENST00000384744 137 ntBASIC1.89□□□□□ -2.11
TMEM116Q8NCL8 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
TMEM116Q8NCL8 RNA5SP323-201ENST00000391094 133 ntBASIC1.89□□□□□ -2.11
TMEM116Q8NCL8 AL359511.1-201ENST00000402970 211 ntBASIC1.89□□□□□ -2.11
TMEM116Q8NCL8 RPS20P15-201ENST00000412792 311 ntBASIC1.89□□□□□ -2.11
TMEM116Q8NCL8 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.89□□□□□ -2.11
TMEM116Q8NCL8 HMGN2P19-201ENST00000425149 265 ntBASIC1.89□□□□□ -2.11
TMEM116Q8NCL8 AL160004.2-201ENST00000432935 350 ntBASIC1.89□□□□□ -2.11
TMEM116Q8NCL8 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.89□□□□□ -2.11
TMEM116Q8NCL8 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.89□□□□□ -2.11
TMEM116Q8NCL8 SNORD65B-201ENST00000459126 73 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 173.2 ms