Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AC087683.1-201ENST00000591187 441 ntBASIC0.61□□□□□ -2.31
ZIC4Q8N9L1 AC022432.1-201ENST00000595739 310 ntBASIC0.61□□□□□ -2.31
ZIC4Q8N9L1 SNORA28-201ENST00000606769 126 ntBASIC0.61□□□□□ -2.31
ZIC4Q8N9L1 AL357078.3-201ENST00000607528 618 ntBASIC0.61□□□□□ -2.31
ZIC4Q8N9L1 MIR8076-201ENST00000611401 83 ntBASIC0.61□□□□□ -2.31
ZIC4Q8N9L1 MIR6788-201ENST00000618842 66 ntBASIC0.61□□□□□ -2.31
ZIC4Q8N9L1 MIR6734-201ENST00000621166 68 ntBASIC0.61□□□□□ -2.31
ZIC4Q8N9L1 AC091931.1-201ENST00000623488 728 ntBASIC0.61□□□□□ -2.31
ZIC4Q8N9L1 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.61□□□□□ -2.31
ZIC4Q8N9L1 RNU6-199P-201ENST00000362954 107 ntBASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 Y_RNA.122-201ENST00000363331 96 ntBASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 Y_RNA.124-201ENST00000363339 93 ntBASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 RNU6-245P-201ENST00000384020 107 ntBASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 SNORA80D-201ENST00000384488 135 ntBASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 MIR521-1-201ENST00000384902 87 ntBASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 AL451046.2-201ENST00000403074 277 ntBASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 AL445567.1-201ENST00000439121 144 ntBASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 AL359672.1-201ENST00000442302 409 ntBASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 RPS4XP11-201ENST00000446897 772 ntBASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 RPL39P39-201ENST00000455840 151 ntBASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 AC117454.1-201ENST00000491120 168 ntBASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 RNU6-415P-201ENST00000516252 97 ntBASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 RNU7-99P-201ENST00000516271 62 ntBASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 RNU6-197P-201ENST00000516680 100 ntBASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 RNA5SP454-201ENST00000517231 127 ntBASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 AC136628.3-201ENST00000521868 290 ntBASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 MTND1P24-201ENST00000552175 861 ntBASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 AL121579.1-201ENST00000555129 305 ntBASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 MIR151B-201ENST00000584249 96 ntBASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 MIR4424-201ENST00000585257 86 ntBASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 AC040904.1-201ENST00000590850 223 ntBASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 AC092747.3-201ENST00000603769 301 ntBASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 AL357312.1-201ENST00000603879 298 ntBASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 AC106800.4-201ENST00000614905 153 ntBASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
ZIC4Q8N9L1 AC008163.1-202ENST00000636004 2889 ntBASIC0.59□□□□□ -2.31
ZIC4Q8N9L1 RNU6-214P-201ENST00000384130 107 ntBASIC0.59□□□□□ -2.31
ZIC4Q8N9L1 RNU6-17P-201ENST00000384245 107 ntBASIC0.59□□□□□ -2.31
ZIC4Q8N9L1 RNU6-784P-201ENST00000384330 106 ntBASIC0.59□□□□□ -2.31
ZIC4Q8N9L1 RNU6-18P-201ENST00000384527 107 ntBASIC0.59□□□□□ -2.31
ZIC4Q8N9L1 MIR608-201ENST00000384820 100 ntBASIC0.59□□□□□ -2.31
ZIC4Q8N9L1 MIR653-201ENST00000385279 96 ntBASIC0.59□□□□□ -2.31
ZIC4Q8N9L1 SNORD37.1-201ENST00000390968 65 ntBASIC0.59□□□□□ -2.31
ZIC4Q8N9L1 AC114482.1-201ENST00000418010 247 ntBASIC0.59□□□□□ -2.31
ZIC4Q8N9L1 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.59□□□□□ -2.31
ZIC4Q8N9L1 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.59□□□□□ -2.31
ZIC4Q8N9L1 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.59□□□□□ -2.31
ZIC4Q8N9L1 AC073464.1-201ENST00000429823 534 ntBASIC0.59□□□□□ -2.31
ZIC4Q8N9L1 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.59□□□□□ -2.31
ZIC4Q8N9L1 MTCO1P29-201ENST00000496868 288 ntBASIC0.59□□□□□ -2.31
ZIC4Q8N9L1 RNU6-947P-201ENST00000516264 106 ntBASIC0.59□□□□□ -2.31
ZIC4Q8N9L1 AL590705.4-201ENST00000532209 134 ntBASIC0.59□□□□□ -2.31
ZIC4Q8N9L1 AC090049.2-201ENST00000550377 109 ntBASIC0.59□□□□□ -2.31
ZIC4Q8N9L1 AL157687.1-201ENST00000554853 619 ntBASIC0.59□□□□□ -2.31
ZIC4Q8N9L1 MIR3908-201ENST00000579798 126 ntBASIC0.59□□□□□ -2.31
ZIC4Q8N9L1 AL590095.2-201ENST00000604136 117 ntBASIC0.59□□□□□ -2.31
ZIC4Q8N9L1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.59□□□□□ -2.31
ZIC4Q8N9L1 U6.73-201ENST00000619194 103 ntBASIC0.59□□□□□ -2.31
ZIC4Q8N9L1 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
ZIC4Q8N9L1 AP000568.1-201ENST00000282964 442 ntBASIC0.58□□□□□ -2.32
ZIC4Q8N9L1 HSBP1P2-201ENST00000299671 229 ntBASIC0.58□□□□□ -2.32
ZIC4Q8N9L1 Y_RNA.116-201ENST00000363292 103 ntBASIC0.58□□□□□ -2.32
ZIC4Q8N9L1 MIR508-201ENST00000384857 115 ntBASIC0.58□□□□□ -2.32
ZIC4Q8N9L1 MIR942-201ENST00000401111 86 ntBASIC0.58□□□□□ -2.32
ZIC4Q8N9L1 RNU6-325P-201ENST00000411132 105 ntBASIC0.58□□□□□ -2.32
ZIC4Q8N9L1 AC006461.1-201ENST00000412637 326 ntBASIC0.58□□□□□ -2.32
ZIC4Q8N9L1 RPS3AP1-201ENST00000413190 320 ntBASIC0.58□□□□□ -2.32
ZIC4Q8N9L1 AL606490.4-201ENST00000423117 127 ntBASIC0.58□□□□□ -2.32
ZIC4Q8N9L1 MRPS10P2-201ENST00000431226 381 ntBASIC0.58□□□□□ -2.32
ZIC4Q8N9L1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.58□□□□□ -2.32
ZIC4Q8N9L1 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.58□□□□□ -2.32
ZIC4Q8N9L1 NDUFB4P10-201ENST00000452541 359 ntBASIC0.58□□□□□ -2.32
ZIC4Q8N9L1 RNU6-1198P-201ENST00000516904 67 ntBASIC0.58□□□□□ -2.32
ZIC4Q8N9L1 RNU7-128P-201ENST00000517247 62 ntBASIC0.58□□□□□ -2.32
ZIC4Q8N9L1 MTND1P5-201ENST00000517906 940 ntBASIC0.58□□□□□ -2.32
ZIC4Q8N9L1 AC133485.1-201ENST00000567176 124 ntBASIC0.58□□□□□ -2.32
ZIC4Q8N9L1 AC138907.6-201ENST00000568401 126 ntBASIC0.58□□□□□ -2.32
ZIC4Q8N9L1 MIR4778-201ENST00000577635 80 ntBASIC0.58□□□□□ -2.32
ZIC4Q8N9L1 U3.8-201ENST00000363675 217 ntBASIC0.57□□□□□ -2.32
ZIC4Q8N9L1 Y_RNA.169-201ENST00000363745 96 ntBASIC0.57□□□□□ -2.32
ZIC4Q8N9L1 RNY3P9-201ENST00000384727 106 ntBASIC0.57□□□□□ -2.32
ZIC4Q8N9L1 MIR100-201ENST00000385259 80 ntBASIC0.57□□□□□ -2.32
ZIC4Q8N9L1 SNORD41-201ENST00000386967 70 ntBASIC0.57□□□□□ -2.32
ZIC4Q8N9L1 AF228730.1-201ENST00000397972 663 ntBASIC0.57□□□□□ -2.32
ZIC4Q8N9L1 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.57□□□□□ -2.32
ZIC4Q8N9L1 MIR1185-2-201ENST00000408687 86 ntBASIC0.57□□□□□ -2.32
ZIC4Q8N9L1 RNA5SP504-201ENST00000410676 117 ntBASIC0.57□□□□□ -2.32
ZIC4Q8N9L1 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.57□□□□□ -2.32
ZIC4Q8N9L1 MTND5P15-201ENST00000434246 349 ntBASIC0.57□□□□□ -2.32
ZIC4Q8N9L1 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.57□□□□□ -2.32
ZIC4Q8N9L1 STAG3L5P-204ENST00000443759 179 ntBASIC0.57□□□□□ -2.32
ZIC4Q8N9L1 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms