Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.81□□□□□ -1.96
SLC44A3Q8N4M1 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
SLC44A3Q8N4M1 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.81□□□□□ -1.96
SLC44A3Q8N4M1 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SLC44A3Q8N4M1 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.81□□□□□ -1.96
SLC44A3Q8N4M1 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SLC44A3Q8N4M1 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.8□□□□□ -1.96
SLC44A3Q8N4M1 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SLC44A3Q8N4M1 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SLC44A3Q8N4M1 AC108206.1-201ENST00000570186 4159 ntBASIC2.8□□□□□ -1.96
SLC44A3Q8N4M1 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SLC44A3Q8N4M1 RNU4-15P-201ENST00000362613 141 ntBASIC2.8□□□□□ -1.96
SLC44A3Q8N4M1 U8.9-201ENST00000365667 134 ntBASIC2.8□□□□□ -1.96
SLC44A3Q8N4M1 Y_RNA.435-201ENST00000384095 112 ntBASIC2.8□□□□□ -1.96
SLC44A3Q8N4M1 Y_RNA.506-201ENST00000384494 102 ntBASIC2.8□□□□□ -1.96
SLC44A3Q8N4M1 RNU6-750P-201ENST00000390946 107 ntBASIC2.8□□□□□ -1.96
SLC44A3Q8N4M1 RNA5SP252-201ENST00000391131 119 ntBASIC2.8□□□□□ -1.96
SLC44A3Q8N4M1 AL512633.1-201ENST00000399931 655 ntBASIC2.8□□□□□ -1.96
SLC44A3Q8N4M1 SNORA3.2-201ENST00000408221 125 ntBASIC2.8□□□□□ -1.96
SLC44A3Q8N4M1 RN7SKP51-201ENST00000410781 304 ntBASIC2.8□□□□□ -1.96
SLC44A3Q8N4M1 AC096649.2-201ENST00000416186 393 ntBASIC2.8□□□□□ -1.96
SLC44A3Q8N4M1 AC009963.1-201ENST00000417265 157 ntBASIC2.8□□□□□ -1.96
SLC44A3Q8N4M1 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.8□□□□□ -1.96
SLC44A3Q8N4M1 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.8□□□□□ -1.96
SLC44A3Q8N4M1 NDUFB4P10-201ENST00000452541 359 ntBASIC2.8□□□□□ -1.96
SLC44A3Q8N4M1 snoU13.15-201ENST00000459407 104 ntBASIC2.8□□□□□ -1.96
SLC44A3Q8N4M1 AL121594.1-201ENST00000475906 575 ntBASIC2.8□□□□□ -1.96
SLC44A3Q8N4M1 SNORA31.1-201ENST00000515993 133 ntBASIC2.8□□□□□ -1.96
SLC44A3Q8N4M1 SNORA31.5-201ENST00000516190 133 ntBASIC2.8□□□□□ -1.96
SLC44A3Q8N4M1 SNORA31.26-201ENST00000517250 137 ntBASIC2.8□□□□□ -1.96
SLC44A3Q8N4M1 MIR4524B-201ENST00000581569 115 ntBASIC2.8□□□□□ -1.96
SLC44A3Q8N4M1 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.8□□□□□ -1.96
SLC44A3Q8N4M1 PCGEM1.1-201ENST00000613431 131 ntBASIC2.8□□□□□ -1.96
SLC44A3Q8N4M1 AC004467.1-201ENST00000615678 330 ntBASIC2.8□□□□□ -1.96
SLC44A3Q8N4M1 AC073349.3-201ENST00000617616 186 ntBASIC2.8□□□□□ -1.96
SLC44A3Q8N4M1 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
SLC44A3Q8N4M1 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SLC44A3Q8N4M1 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.79□□□□□ -1.96
SLC44A3Q8N4M1 ZNF658B-202ENST00000615961 3375 ntBASIC2.79□□□□□ -1.96
SLC44A3Q8N4M1 RNU4-80P-201ENST00000363200 141 ntBASIC2.79□□□□□ -1.96
SLC44A3Q8N4M1 Y_RNA.240-201ENST00000364469 95 ntBASIC2.79□□□□□ -1.96
SLC44A3Q8N4M1 MIR512-1-201ENST00000384913 84 ntBASIC2.79□□□□□ -1.96
SLC44A3Q8N4M1 RNU2-54P-201ENST00000410299 190 ntBASIC2.79□□□□□ -1.96
SLC44A3Q8N4M1 RNA5SP504-201ENST00000410676 117 ntBASIC2.79□□□□□ -1.96
SLC44A3Q8N4M1 AL365496.1-201ENST00000426885 215 ntBASIC2.79□□□□□ -1.96
SLC44A3Q8N4M1 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.79□□□□□ -1.96
SLC44A3Q8N4M1 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.79□□□□□ -1.96
SLC44A3Q8N4M1 Y_RNA.679-201ENST00000516416 91 ntBASIC2.79□□□□□ -1.96
SLC44A3Q8N4M1 MIR3923-201ENST00000579521 83 ntBASIC2.79□□□□□ -1.96
SLC44A3Q8N4M1 MIR4308-201ENST00000580634 81 ntBASIC2.79□□□□□ -1.96
SLC44A3Q8N4M1 MIR3145-201ENST00000580727 82 ntBASIC2.79□□□□□ -1.96
SLC44A3Q8N4M1 U6.106-201ENST00000636360 105 ntBASIC2.79□□□□□ -1.96
SLC44A3Q8N4M1 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
SLC44A3Q8N4M1 AC092435.3-201ENST00000565538 3654 ntBASIC2.78□□□□□ -1.96
SLC44A3Q8N4M1 RNU6-727P-201ENST00000363592 107 ntBASIC2.78□□□□□ -1.96
SLC44A3Q8N4M1 Y_RNA.233-201ENST00000364407 101 ntBASIC2.78□□□□□ -1.96
SLC44A3Q8N4M1 Y_RNA.304-201ENST00000365011 112 ntBASIC2.78□□□□□ -1.96
SLC44A3Q8N4M1 Y_RNA.415-201ENST00000384012 112 ntBASIC2.78□□□□□ -1.96
SLC44A3Q8N4M1 Y_RNA.597-201ENST00000410463 100 ntBASIC2.78□□□□□ -1.96
SLC44A3Q8N4M1 AP001324.2-201ENST00000461163 319 ntBASIC2.78□□□□□ -1.96
SLC44A3Q8N4M1 RN7SL499P-201ENST00000481141 276 ntBASIC2.78□□□□□ -1.96
SLC44A3Q8N4M1 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.78□□□□□ -1.96
SLC44A3Q8N4M1 RNA5SP76-201ENST00000516277 87 ntBASIC2.78□□□□□ -1.96
SLC44A3Q8N4M1 RNU2-12P-201ENST00000517216 168 ntBASIC2.78□□□□□ -1.96
SLC44A3Q8N4M1 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.78□□□□□ -1.96
SLC44A3Q8N4M1 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.78□□□□□ -1.96
SLC44A3Q8N4M1 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.78□□□□□ -1.96
SLC44A3Q8N4M1 AC105137.2-201ENST00000569073 466 ntBASIC2.78□□□□□ -1.96
SLC44A3Q8N4M1 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.78□□□□□ -1.96
SLC44A3Q8N4M1 MIR4769-201ENST00000584126 77 ntBASIC2.78□□□□□ -1.96
SLC44A3Q8N4M1 ZNF861P-201ENST00000588126 639 ntBASIC2.78□□□□□ -1.96
SLC44A3Q8N4M1 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.78□□□□□ -1.96
SLC44A3Q8N4M1 CTSLP2-204ENST00000629029 392 ntBASIC2.78□□□□□ -1.96
SLC44A3Q8N4M1 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.78□□□□□ -1.96
SLC44A3Q8N4M1 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
SLC44A3Q8N4M1 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SLC44A3Q8N4M1 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SLC44A3Q8N4M1 RNU6-653P-201ENST00000363074 106 ntBASIC2.77□□□□□ -1.97
SLC44A3Q8N4M1 Y_RNA.170-201ENST00000363746 110 ntBASIC2.77□□□□□ -1.97
SLC44A3Q8N4M1 RNU6-454P-201ENST00000364292 107 ntBASIC2.77□□□□□ -1.97
SLC44A3Q8N4M1 Y_RNA.498-201ENST00000384460 102 ntBASIC2.77□□□□□ -1.97
SLC44A3Q8N4M1 SNORA19-201ENST00000384737 128 ntBASIC2.77□□□□□ -1.97
SLC44A3Q8N4M1 SNORA26.7-201ENST00000391288 122 ntBASIC2.77□□□□□ -1.97
SLC44A3Q8N4M1 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.77□□□□□ -1.97
SLC44A3Q8N4M1 AC104332.2-201ENST00000429959 156 ntBASIC2.77□□□□□ -1.97
SLC44A3Q8N4M1 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.77□□□□□ -1.97
SLC44A3Q8N4M1 RNY3P16-201ENST00000516338 101 ntBASIC2.77□□□□□ -1.97
SLC44A3Q8N4M1 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.77□□□□□ -1.97
SLC44A3Q8N4M1 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.77□□□□□ -1.97
SLC44A3Q8N4M1 DEFB117-201ENST00000602356 141 ntBASIC2.77□□□□□ -1.97
SLC44A3Q8N4M1 AC021753.1-201ENST00000635724 168 ntBASIC2.77□□□□□ -1.97
SLC44A3Q8N4M1 MIR3674-201ENST00000636576 68 ntBASIC2.77□□□□□ -1.97
SLC44A3Q8N4M1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.77□□□□□ -1.97
SLC44A3Q8N4M1 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
SLC44A3Q8N4M1 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.76□□□□□ -1.97
SLC44A3Q8N4M1 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SLC44A3Q8N4M1 RNU6-1272P-201ENST00000362776 107 ntBASIC2.76□□□□□ -1.97
SLC44A3Q8N4M1 RNU4-56P-201ENST00000364700 142 ntBASIC2.76□□□□□ -1.97
SLC44A3Q8N4M1 RNU6-923P-201ENST00000364753 107 ntBASIC2.76□□□□□ -1.97
SLC44A3Q8N4M1 SNORA72.2-201ENST00000365028 127 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 201.3 ms