Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.08□□□□□ -2.08
BEST3Q8N1M1 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
BEST3Q8N1M1 AC091812.1-201ENST00000432235 1948 ntBASIC2.07□□□□□ -2.08
BEST3Q8N1M1 Y_RNA.415-201ENST00000384012 112 ntBASIC2.07□□□□□ -2.08
BEST3Q8N1M1 SNORD14D-201ENST00000384390 87 ntBASIC2.07□□□□□ -2.08
BEST3Q8N1M1 SNORD78.2-201ENST00000391076 69 ntBASIC2.07□□□□□ -2.08
BEST3Q8N1M1 MIR1262-201ENST00000408276 93 ntBASIC2.07□□□□□ -2.08
BEST3Q8N1M1 UQCRBP2-201ENST00000447827 297 ntBASIC2.07□□□□□ -2.08
BEST3Q8N1M1 AL139109.1-201ENST00000455491 297 ntBASIC2.07□□□□□ -2.08
BEST3Q8N1M1 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.07□□□□□ -2.08
BEST3Q8N1M1 IGKV3-31-201ENST00000523109 329 ntBASIC2.07□□□□□ -2.08
BEST3Q8N1M1 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.07□□□□□ -2.08
BEST3Q8N1M1 AC087441.2-201ENST00000529141 262 ntBASIC2.07□□□□□ -2.08
BEST3Q8N1M1 AL031274.2-201ENST00000599419 203 ntBASIC2.07□□□□□ -2.08
BEST3Q8N1M1 SNORD14A-201ENST00000606526 91 ntBASIC2.07□□□□□ -2.08
BEST3Q8N1M1 MIR6895-201ENST00000613497 78 ntBASIC2.07□□□□□ -2.08
BEST3Q8N1M1 AP006437.1-201ENST00000641440 3685 ntBASIC2.07□□□□□ -2.08
BEST3Q8N1M1 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
BEST3Q8N1M1 Y_RNA.158-201ENST00000363651 101 ntBASIC2.06□□□□□ -2.08
BEST3Q8N1M1 U3.8-201ENST00000363675 217 ntBASIC2.06□□□□□ -2.08
BEST3Q8N1M1 SNORD87-201ENST00000364849 89 ntBASIC2.06□□□□□ -2.08
BEST3Q8N1M1 SNORA33.2-201ENST00000365413 134 ntBASIC2.06□□□□□ -2.08
BEST3Q8N1M1 Y_RNA.422-201ENST00000384054 114 ntBASIC2.06□□□□□ -2.08
BEST3Q8N1M1 RNU6-975P-201ENST00000384296 105 ntBASIC2.06□□□□□ -2.08
BEST3Q8N1M1 MIR29C-201ENST00000385231 88 ntBASIC2.06□□□□□ -2.08
BEST3Q8N1M1 SNORA40.19-201ENST00000390846 128 ntBASIC2.06□□□□□ -2.08
BEST3Q8N1M1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.06□□□□□ -2.08
BEST3Q8N1M1 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.06□□□□□ -2.08
BEST3Q8N1M1 FCF1P4-201ENST00000448326 183 ntBASIC2.06□□□□□ -2.08
BEST3Q8N1M1 HMGB3P3-201ENST00000510526 400 ntBASIC2.06□□□□□ -2.08
BEST3Q8N1M1 RNU6-948P-201ENST00000516374 107 ntBASIC2.06□□□□□ -2.08
BEST3Q8N1M1 RNU2-34P-201ENST00000516534 121 ntBASIC2.06□□□□□ -2.08
BEST3Q8N1M1 RNU6-1012P-201ENST00000516606 109 ntBASIC2.06□□□□□ -2.08
BEST3Q8N1M1 Y_RNA.721-201ENST00000517207 102 ntBASIC2.06□□□□□ -2.08
BEST3Q8N1M1 AP003072.1-201ENST00000531740 145 ntBASIC2.06□□□□□ -2.08
BEST3Q8N1M1 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.06□□□□□ -2.08
BEST3Q8N1M1 AC022202.1-201ENST00000613515 211 ntBASIC2.06□□□□□ -2.08
BEST3Q8N1M1 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.06□□□□□ -2.08
BEST3Q8N1M1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.06□□□□□ -2.08
BEST3Q8N1M1 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
BEST3Q8N1M1 AC009487.4-201ENST00000624969 3585 ntBASIC2.05□□□□□ -2.08
BEST3Q8N1M1 ZNF720P1-201ENST00000562403 1939 ntBASIC2.05□□□□□ -2.08
BEST3Q8N1M1 RNU4-50P-201ENST00000364361 141 ntBASIC2.05□□□□□ -2.08
BEST3Q8N1M1 Y_RNA.326-201ENST00000365176 113 ntBASIC2.05□□□□□ -2.08
BEST3Q8N1M1 RNU6-708P-201ENST00000384217 107 ntBASIC2.05□□□□□ -2.08
BEST3Q8N1M1 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
BEST3Q8N1M1 AL590004.1-201ENST00000405321 300 ntBASIC2.05□□□□□ -2.08
BEST3Q8N1M1 RNA5SP270-201ENST00000411361 118 ntBASIC2.05□□□□□ -2.08
BEST3Q8N1M1 SDAD1P3-201ENST00000427380 333 ntBASIC2.05□□□□□ -2.08
BEST3Q8N1M1 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.05□□□□□ -2.08
BEST3Q8N1M1 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.05□□□□□ -2.08
BEST3Q8N1M1 AC067942.3-201ENST00000512025 362 ntBASIC2.05□□□□□ -2.08
BEST3Q8N1M1 SNORA40.9-201ENST00000515895 93 ntBASIC2.05□□□□□ -2.08
BEST3Q8N1M1 IGLV3-17-201ENST00000519099 244 ntBASIC2.05□□□□□ -2.08
BEST3Q8N1M1 AC022616.4-201ENST00000522985 181 ntBASIC2.05□□□□□ -2.08
BEST3Q8N1M1 AC040926.1-201ENST00000530195 238 ntBASIC2.05□□□□□ -2.08
BEST3Q8N1M1 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.05□□□□□ -2.08
BEST3Q8N1M1 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.05□□□□□ -2.08
BEST3Q8N1M1 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.05□□□□□ -2.08
BEST3Q8N1M1 Y_RNA.812-201ENST00000610788 101 ntBASIC2.05□□□□□ -2.08
BEST3Q8N1M1 Y_RNA.784-201ENST00000613803 101 ntBASIC2.05□□□□□ -2.08
BEST3Q8N1M1 Y_RNA.787-201ENST00000616522 101 ntBASIC2.05□□□□□ -2.08
BEST3Q8N1M1 Y_RNA.780-201ENST00000617336 101 ntBASIC2.05□□□□□ -2.08
BEST3Q8N1M1 Y_RNA.801-201ENST00000619005 101 ntBASIC2.05□□□□□ -2.08
BEST3Q8N1M1 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
BEST3Q8N1M1 RNU6-639P-201ENST00000384074 107 ntBASIC2.04□□□□□ -2.08
BEST3Q8N1M1 SNORA51.11-201ENST00000384442 131 ntBASIC2.04□□□□□ -2.08
BEST3Q8N1M1 Y_RNA.498-201ENST00000384460 102 ntBASIC2.04□□□□□ -2.08
BEST3Q8N1M1 RNU6-160P-201ENST00000384591 107 ntBASIC2.04□□□□□ -2.08
BEST3Q8N1M1 Y_RNA.645-201ENST00000391229 102 ntBASIC2.04□□□□□ -2.08
BEST3Q8N1M1 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
BEST3Q8N1M1 MRPL35P1-201ENST00000404272 572 ntBASIC2.04□□□□□ -2.08
BEST3Q8N1M1 MTCO1P44-201ENST00000441935 243 ntBASIC2.04□□□□□ -2.08
BEST3Q8N1M1 AL357134.1-201ENST00000445848 426 ntBASIC2.04□□□□□ -2.08
BEST3Q8N1M1 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.04□□□□□ -2.08
BEST3Q8N1M1 snoU13.15-201ENST00000459407 104 ntBASIC2.04□□□□□ -2.08
BEST3Q8N1M1 RNU7-57P-201ENST00000459540 60 ntBASIC2.04□□□□□ -2.08
BEST3Q8N1M1 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.04□□□□□ -2.08
BEST3Q8N1M1 AC018448.1-201ENST00000552843 316 ntBASIC2.04□□□□□ -2.08
BEST3Q8N1M1 LINC02555-201ENST00000563933 1951 ntBASIC2.04□□□□□ -2.08
BEST3Q8N1M1 MIR4659A-201ENST00000580269 81 ntBASIC2.04□□□□□ -2.08
BEST3Q8N1M1 AL390123.1-201ENST00000603216 237 ntBASIC2.04□□□□□ -2.08
BEST3Q8N1M1 AL121655.1-201ENST00000605811 308 ntBASIC2.04□□□□□ -2.08
BEST3Q8N1M1 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.04□□□□□ -2.08
BEST3Q8N1M1 AL357075.2-201ENST00000614906 189 ntBASIC2.04□□□□□ -2.08
BEST3Q8N1M1 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.04□□□□□ -2.08
BEST3Q8N1M1 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.04□□□□□ -2.08
BEST3Q8N1M1 U6.92-201ENST00000636464 89 ntBASIC2.04□□□□□ -2.08
BEST3Q8N1M1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
BEST3Q8N1M1 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
BEST3Q8N1M1 MTND4P1-201ENST00000457501 1466 ntBASIC2.03□□□□□ -2.08
BEST3Q8N1M1 RNU6-1264P-201ENST00000383891 107 ntBASIC2.03□□□□□ -2.08
BEST3Q8N1M1 Y_RNA.389-201ENST00000383924 113 ntBASIC2.03□□□□□ -2.08
BEST3Q8N1M1 RNU6-418P-201ENST00000384035 107 ntBASIC2.03□□□□□ -2.08
BEST3Q8N1M1 RNU6-926P-201ENST00000384075 107 ntBASIC2.03□□□□□ -2.08
BEST3Q8N1M1 RNU6-1235P-201ENST00000384559 107 ntBASIC2.03□□□□□ -2.08
BEST3Q8N1M1 SNORA64-201ENST00000384674 134 ntBASIC2.03□□□□□ -2.08
BEST3Q8N1M1 MIR548B-201ENST00000385247 97 ntBASIC2.03□□□□□ -2.08
BEST3Q8N1M1 SNORA11.4-201ENST00000408823 129 ntBASIC2.03□□□□□ -2.08
BEST3Q8N1M1 RNU6-101P-201ENST00000410323 104 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms