Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 RNU4-9P-201ENST00000364951 139 ntBASIC1.21□□□□□ -2.22
CCDC65Q8IXS2 SNORA22-201ENST00000383907 134 ntBASIC1.21□□□□□ -2.22
CCDC65Q8IXS2 RNU6-790P-201ENST00000384479 105 ntBASIC1.21□□□□□ -2.22
CCDC65Q8IXS2 SNORA22C-201ENST00000384614 134 ntBASIC1.21□□□□□ -2.22
CCDC65Q8IXS2 MIR32-201ENST00000384965 70 ntBASIC1.21□□□□□ -2.22
CCDC65Q8IXS2 MIR517A-201ENST00000385001 87 ntBASIC1.21□□□□□ -2.22
CCDC65Q8IXS2 RNU6-1148P-201ENST00000410992 104 ntBASIC1.21□□□□□ -2.22
CCDC65Q8IXS2 ZNF885P-201ENST00000420174 1098 ntBASIC1.21□□□□□ -2.22
CCDC65Q8IXS2 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.21□□□□□ -2.22
CCDC65Q8IXS2 Z82205.1-201ENST00000428456 297 ntBASIC1.21□□□□□ -2.22
CCDC65Q8IXS2 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.21□□□□□ -2.22
CCDC65Q8IXS2 TRBVA-201ENST00000498804 316 ntBASIC1.21□□□□□ -2.22
CCDC65Q8IXS2 AC079140.2-201ENST00000506193 142 ntBASIC1.21□□□□□ -2.22
CCDC65Q8IXS2 RNA5SP54-201ENST00000516951 92 ntBASIC1.21□□□□□ -2.22
CCDC65Q8IXS2 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.21□□□□□ -2.22
CCDC65Q8IXS2 MIR5696-201ENST00000578474 85 ntBASIC1.21□□□□□ -2.22
CCDC65Q8IXS2 MIR3942-201ENST00000585264 109 ntBASIC1.21□□□□□ -2.22
CCDC65Q8IXS2 HSPE1P19-201ENST00000603327 295 ntBASIC1.21□□□□□ -2.22
CCDC65Q8IXS2 AL078596.1-201ENST00000624856 447 ntBASIC1.21□□□□□ -2.22
CCDC65Q8IXS2 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.21□□□□□ -2.22
CCDC65Q8IXS2 SNORA72.2-201ENST00000365028 127 ntBASIC1.2□□□□□ -2.22
CCDC65Q8IXS2 SNORD116-11-201ENST00000383882 92 ntBASIC1.2□□□□□ -2.22
CCDC65Q8IXS2 RNU6-245P-201ENST00000384020 107 ntBASIC1.2□□□□□ -2.22
CCDC65Q8IXS2 RNA5SP109-201ENST00000391010 116 ntBASIC1.2□□□□□ -2.22
CCDC65Q8IXS2 MRPL35P1-201ENST00000404272 572 ntBASIC1.2□□□□□ -2.22
CCDC65Q8IXS2 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.2□□□□□ -2.22
CCDC65Q8IXS2 RPL30P10-201ENST00000488148 337 ntBASIC1.2□□□□□ -2.22
CCDC65Q8IXS2 RNU1-117P-201ENST00000517041 158 ntBASIC1.2□□□□□ -2.22
CCDC65Q8IXS2 RNU7-128P-201ENST00000517247 62 ntBASIC1.2□□□□□ -2.22
CCDC65Q8IXS2 AC019176.1-201ENST00000518519 225 ntBASIC1.2□□□□□ -2.22
CCDC65Q8IXS2 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.2□□□□□ -2.22
CCDC65Q8IXS2 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.2□□□□□ -2.22
CCDC65Q8IXS2 AC080013.6-201ENST00000606185 215 ntBASIC1.2□□□□□ -2.22
CCDC65Q8IXS2 AC097065.2-201ENST00000608159 533 ntBASIC1.2□□□□□ -2.22
CCDC65Q8IXS2 AL078604.3-201ENST00000615580 211 ntBASIC1.2□□□□□ -2.22
CCDC65Q8IXS2 AC006504.8-201ENST00000621046 635 ntBASIC1.2□□□□□ -2.22
CCDC65Q8IXS2 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
CCDC65Q8IXS2 MTND5P35-201ENST00000557537 1720 ntBASIC1.2□□□□□ -2.22
CCDC65Q8IXS2 MTND4P12-201ENST00000498999 1377 ntBASIC1.2□□□□□ -2.22
CCDC65Q8IXS2 SNORD87-201ENST00000364849 89 ntBASIC1.19□□□□□ -2.22
CCDC65Q8IXS2 Y_RNA.327-201ENST00000365201 102 ntBASIC1.19□□□□□ -2.22
CCDC65Q8IXS2 Y_RNA.414-201ENST00000384011 101 ntBASIC1.19□□□□□ -2.22
CCDC65Q8IXS2 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
CCDC65Q8IXS2 RPL21P1-201ENST00000399532 476 ntBASIC1.19□□□□□ -2.22
CCDC65Q8IXS2 Y_RNA.595-201ENST00000410403 105 ntBASIC1.19□□□□□ -2.22
CCDC65Q8IXS2 AC016907.1-201ENST00000419483 435 ntBASIC1.19□□□□□ -2.22
CCDC65Q8IXS2 MTND3P21-201ENST00000433774 331 ntBASIC1.19□□□□□ -2.22
CCDC65Q8IXS2 AL135790.2-201ENST00000437701 267 ntBASIC1.19□□□□□ -2.22
CCDC65Q8IXS2 DAP3P1-201ENST00000441522 278 ntBASIC1.19□□□□□ -2.22
CCDC65Q8IXS2 RPS29P28-201ENST00000446439 141 ntBASIC1.19□□□□□ -2.22
CCDC65Q8IXS2 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.19□□□□□ -2.22
CCDC65Q8IXS2 RPL30P7-201ENST00000479312 323 ntBASIC1.19□□□□□ -2.22
CCDC65Q8IXS2 RNU6-1146P-201ENST00000516282 102 ntBASIC1.19□□□□□ -2.22
CCDC65Q8IXS2 SNORA31.10-201ENST00000516482 106 ntBASIC1.19□□□□□ -2.22
CCDC65Q8IXS2 AC024995.1-201ENST00000523014 93 ntBASIC1.19□□□□□ -2.22
CCDC65Q8IXS2 AC245505.1-201ENST00000556398 224 ntBASIC1.19□□□□□ -2.22
CCDC65Q8IXS2 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.19□□□□□ -2.22
CCDC65Q8IXS2 FRG2DP-202ENST00000566967 323 ntBASIC1.19□□□□□ -2.22
CCDC65Q8IXS2 MIR4295-201ENST00000585286 85 ntBASIC1.19□□□□□ -2.22
CCDC65Q8IXS2 POLR3GP2-201ENST00000588366 668 ntBASIC1.19□□□□□ -2.22
CCDC65Q8IXS2 AC022217.4-201ENST00000604389 163 ntBASIC1.19□□□□□ -2.22
CCDC65Q8IXS2 SNORD11B-201ENST00000607707 90 ntBASIC1.19□□□□□ -2.22
CCDC65Q8IXS2 AC090617.10-201ENST00000624308 134 ntBASIC1.19□□□□□ -2.22
CCDC65Q8IXS2 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CCDC65Q8IXS2 RNU6-873P-201ENST00000363833 107 ntBASIC1.18□□□□□ -2.22
CCDC65Q8IXS2 RNU6-17P-201ENST00000384245 107 ntBASIC1.18□□□□□ -2.22
CCDC65Q8IXS2 RNU6-18P-201ENST00000384527 107 ntBASIC1.18□□□□□ -2.22
CCDC65Q8IXS2 Y_RNA.554-201ENST00000384672 102 ntBASIC1.18□□□□□ -2.22
CCDC65Q8IXS2 MIR515-2-201ENST00000384883 83 ntBASIC1.18□□□□□ -2.22
CCDC65Q8IXS2 MIR515-1-201ENST00000384884 83 ntBASIC1.18□□□□□ -2.22
CCDC65Q8IXS2 SNORA12.1-201ENST00000390873 148 ntBASIC1.18□□□□□ -2.22
CCDC65Q8IXS2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CCDC65Q8IXS2 EIF1P1-201ENST00000421436 341 ntBASIC1.18□□□□□ -2.22
CCDC65Q8IXS2 AL445305.1-201ENST00000432577 575 ntBASIC1.18□□□□□ -2.22
CCDC65Q8IXS2 AC092473.1-201ENST00000441098 221 ntBASIC1.18□□□□□ -2.22
CCDC65Q8IXS2 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.18□□□□□ -2.22
CCDC65Q8IXS2 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.18□□□□□ -2.22
CCDC65Q8IXS2 RPS26P45-201ENST00000471748 340 ntBASIC1.18□□□□□ -2.22
CCDC65Q8IXS2 AC087343.1-201ENST00000477341 475 ntBASIC1.18□□□□□ -2.22
CCDC65Q8IXS2 HMGN1P12-201ENST00000499125 195 ntBASIC1.18□□□□□ -2.22
CCDC65Q8IXS2 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.18□□□□□ -2.22
CCDC65Q8IXS2 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.18□□□□□ -2.22
CCDC65Q8IXS2 RNU6-314P-201ENST00000516574 104 ntBASIC1.18□□□□□ -2.22
CCDC65Q8IXS2 AC009248.2-201ENST00000619826 254 ntBASIC1.18□□□□□ -2.22
CCDC65Q8IXS2 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.18□□□□□ -2.22
CCDC65Q8IXS2 RNU6-137P-201ENST00000363680 108 ntBASIC1.17□□□□□ -2.22
CCDC65Q8IXS2 Y_RNA.319-201ENST00000365138 92 ntBASIC1.17□□□□□ -2.22
CCDC65Q8IXS2 RNU6-1240P-201ENST00000365155 104 ntBASIC1.17□□□□□ -2.22
CCDC65Q8IXS2 RNU6-159P-201ENST00000391080 106 ntBASIC1.17□□□□□ -2.22
CCDC65Q8IXS2 MIR320B2-201ENST00000408479 138 ntBASIC1.17□□□□□ -2.22
CCDC65Q8IXS2 MIR1185-2-201ENST00000408687 86 ntBASIC1.17□□□□□ -2.22
CCDC65Q8IXS2 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.17□□□□□ -2.22
CCDC65Q8IXS2 AC243428.1-201ENST00000421099 264 ntBASIC1.17□□□□□ -2.22
CCDC65Q8IXS2 SNORA25.14-201ENST00000516481 132 ntBASIC1.17□□□□□ -2.22
CCDC65Q8IXS2 RNU6-1088P-201ENST00000516850 104 ntBASIC1.17□□□□□ -2.22
CCDC65Q8IXS2 AC109635.3-201ENST00000529536 185 ntBASIC1.17□□□□□ -2.22
CCDC65Q8IXS2 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.17□□□□□ -2.22
CCDC65Q8IXS2 MIR4709-201ENST00000577272 72 ntBASIC1.17□□□□□ -2.22
CCDC65Q8IXS2 AL390123.1-201ENST00000603216 237 ntBASIC1.17□□□□□ -2.22
CCDC65Q8IXS2 AL365434.2-201ENST00000607979 234 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms