Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 MTND4LP32-201ENST00000636111 270 ntBASIC1.81□□□□□ -2.12
CCDC60Q8IWA6 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC60Q8IWA6 Y_RNA.384-201ENST00000383909 102 ntBASIC1.8□□□□□ -2.12
CCDC60Q8IWA6 RNU6-1297P-201ENST00000384415 104 ntBASIC1.8□□□□□ -2.12
CCDC60Q8IWA6 RNU6-310P-201ENST00000384655 107 ntBASIC1.8□□□□□ -2.12
CCDC60Q8IWA6 RNU6-159P-201ENST00000391080 106 ntBASIC1.8□□□□□ -2.12
CCDC60Q8IWA6 MIR190B-201ENST00000401119 79 ntBASIC1.8□□□□□ -2.12
CCDC60Q8IWA6 AL033519.2-201ENST00000403958 392 ntBASIC1.8□□□□□ -2.12
CCDC60Q8IWA6 RNU4-62P-201ENST00000410125 130 ntBASIC1.8□□□□□ -2.12
CCDC60Q8IWA6 RN7SKP101-201ENST00000411376 320 ntBASIC1.8□□□□□ -2.12
CCDC60Q8IWA6 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC60Q8IWA6 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC60Q8IWA6 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC60Q8IWA6 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC60Q8IWA6 AC016717.1-201ENST00000448918 286 ntBASIC1.8□□□□□ -2.12
CCDC60Q8IWA6 RNU6-277P-201ENST00000516272 106 ntBASIC1.8□□□□□ -2.12
CCDC60Q8IWA6 AC087441.2-201ENST00000529141 262 ntBASIC1.8□□□□□ -2.12
CCDC60Q8IWA6 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.8□□□□□ -2.12
CCDC60Q8IWA6 AC024614.2-201ENST00000577584 372 ntBASIC1.8□□□□□ -2.12
CCDC60Q8IWA6 MIR3169-201ENST00000578032 83 ntBASIC1.8□□□□□ -2.12
CCDC60Q8IWA6 MIR5701-3-201ENST00000578890 82 ntBASIC1.8□□□□□ -2.12
CCDC60Q8IWA6 MIR5701-1-201ENST00000585138 82 ntBASIC1.8□□□□□ -2.12
CCDC60Q8IWA6 AL132765.2-201ENST00000610812 351 ntBASIC1.8□□□□□ -2.12
CCDC60Q8IWA6 Y_RNA.804-201ENST00000615262 101 ntBASIC1.8□□□□□ -2.12
CCDC60Q8IWA6 MIR5701-2-201ENST00000615634 82 ntBASIC1.8□□□□□ -2.12
CCDC60Q8IWA6 AL359697.1-201ENST00000624879 587 ntBASIC1.8□□□□□ -2.12
CCDC60Q8IWA6 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.8□□□□□ -2.12
CCDC60Q8IWA6 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC60Q8IWA6 MTND5P16-201ENST00000460269 1703 ntBASIC1.8□□□□□ -2.12
CCDC60Q8IWA6 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
CCDC60Q8IWA6 Y_RNA.70-201ENST00000362886 110 ntBASIC1.79□□□□□ -2.12
CCDC60Q8IWA6 RNU6-280P-201ENST00000364145 104 ntBASIC1.79□□□□□ -2.12
CCDC60Q8IWA6 Y_RNA.259-201ENST00000364619 101 ntBASIC1.79□□□□□ -2.12
CCDC60Q8IWA6 RNU6-245P-201ENST00000384020 107 ntBASIC1.79□□□□□ -2.12
CCDC60Q8IWA6 MIR10B-201ENST00000385011 110 ntBASIC1.79□□□□□ -2.12
CCDC60Q8IWA6 SNORA67.5-201ENST00000391036 107 ntBASIC1.79□□□□□ -2.12
CCDC60Q8IWA6 MTND4LP11-201ENST00000422184 280 ntBASIC1.79□□□□□ -2.12
CCDC60Q8IWA6 MTCYBP10-201ENST00000424905 650 ntBASIC1.79□□□□□ -2.12
CCDC60Q8IWA6 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC60Q8IWA6 MTCO1P44-201ENST00000441935 243 ntBASIC1.79□□□□□ -2.12
CCDC60Q8IWA6 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC60Q8IWA6 RNA5SP57-201ENST00000459463 123 ntBASIC1.79□□□□□ -2.12
CCDC60Q8IWA6 AC114982.1-201ENST00000469402 321 ntBASIC1.79□□□□□ -2.12
CCDC60Q8IWA6 HMGN2P9-201ENST00000476875 229 ntBASIC1.79□□□□□ -2.12
CCDC60Q8IWA6 AC004584.2-201ENST00000570407 410 ntBASIC1.79□□□□□ -2.12
CCDC60Q8IWA6 SNORD11B-201ENST00000607707 90 ntBASIC1.79□□□□□ -2.12
CCDC60Q8IWA6 MIR1244-1-201ENST00000612829 85 ntBASIC1.79□□□□□ -2.12
CCDC60Q8IWA6 AC083806.3-201ENST00000614016 455 ntBASIC1.79□□□□□ -2.12
CCDC60Q8IWA6 AL078596.1-201ENST00000624856 447 ntBASIC1.79□□□□□ -2.12
CCDC60Q8IWA6 MIR1244-3-201ENST00000635744 85 ntBASIC1.79□□□□□ -2.12
CCDC60Q8IWA6 MIR1244-2-201ENST00000636449 85 ntBASIC1.79□□□□□ -2.12
CCDC60Q8IWA6 MIR1244-4-202ENST00000636813 85 ntBASIC1.79□□□□□ -2.12
CCDC60Q8IWA6 AL159152.1-201ENST00000635019 2587 ntBASIC1.78□□□□□ -2.12
CCDC60Q8IWA6 RNU6-874P-201ENST00000362390 105 ntBASIC1.78□□□□□ -2.12
CCDC60Q8IWA6 RNU6-137P-201ENST00000363680 108 ntBASIC1.78□□□□□ -2.12
CCDC60Q8IWA6 SNORD87-201ENST00000364849 89 ntBASIC1.78□□□□□ -2.12
CCDC60Q8IWA6 Y_RNA.387-201ENST00000383918 102 ntBASIC1.78□□□□□ -2.12
CCDC60Q8IWA6 RNU6-890P-201ENST00000384121 107 ntBASIC1.78□□□□□ -2.12
CCDC60Q8IWA6 Y_RNA.529-201ENST00000384586 119 ntBASIC1.78□□□□□ -2.12
CCDC60Q8IWA6 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
CCDC60Q8IWA6 RNA5SP501-201ENST00000410990 112 ntBASIC1.78□□□□□ -2.12
CCDC60Q8IWA6 AC007098.1-201ENST00000420122 367 ntBASIC1.78□□□□□ -2.12
CCDC60Q8IWA6 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC60Q8IWA6 MTCO3P10-201ENST00000455912 772 ntBASIC1.78□□□□□ -2.12
CCDC60Q8IWA6 RNU1-131P-201ENST00000458943 161 ntBASIC1.78□□□□□ -2.12
CCDC60Q8IWA6 Y_RNA.653-201ENST00000459091 95 ntBASIC1.78□□□□□ -2.12
CCDC60Q8IWA6 RPL17P19-201ENST00000489069 552 ntBASIC1.78□□□□□ -2.12
CCDC60Q8IWA6 AC097473.1-201ENST00000508142 408 ntBASIC1.78□□□□□ -2.12
CCDC60Q8IWA6 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.78□□□□□ -2.12
CCDC60Q8IWA6 AC093303.1-201ENST00000514549 295 ntBASIC1.78□□□□□ -2.12
CCDC60Q8IWA6 RNU6-1114P-201ENST00000516022 107 ntBASIC1.78□□□□□ -2.12
CCDC60Q8IWA6 RNU6-344P-201ENST00000516635 111 ntBASIC1.78□□□□□ -2.12
CCDC60Q8IWA6 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.78□□□□□ -2.12
CCDC60Q8IWA6 AL355375.2-201ENST00000574825 175 ntBASIC1.78□□□□□ -2.12
CCDC60Q8IWA6 AL645939.4-201ENST00000604495 135 ntBASIC1.78□□□□□ -2.12
CCDC60Q8IWA6 AC025253.1-201ENST00000613623 543 ntBASIC1.78□□□□□ -2.12
CCDC60Q8IWA6 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC60Q8IWA6 RNU6-99P-201ENST00000364721 107 ntBASIC1.77□□□□□ -2.13
CCDC60Q8IWA6 Y_RNA.415-201ENST00000384012 112 ntBASIC1.77□□□□□ -2.13
CCDC60Q8IWA6 SNORA8-201ENST00000384574 139 ntBASIC1.77□□□□□ -2.13
CCDC60Q8IWA6 MIR586-201ENST00000385035 97 ntBASIC1.77□□□□□ -2.13
CCDC60Q8IWA6 MTCYBP4-201ENST00000401524 249 ntBASIC1.77□□□□□ -2.13
CCDC60Q8IWA6 MIR1323-201ENST00000408090 73 ntBASIC1.77□□□□□ -2.13
CCDC60Q8IWA6 MTATP6P23-201ENST00000440153 476 ntBASIC1.77□□□□□ -2.13
CCDC60Q8IWA6 AL357134.1-201ENST00000445848 426 ntBASIC1.77□□□□□ -2.13
CCDC60Q8IWA6 AC074290.1-201ENST00000448883 135 ntBASIC1.77□□□□□ -2.13
CCDC60Q8IWA6 AC091179.3-201ENST00000474761 144 ntBASIC1.77□□□□□ -2.13
CCDC60Q8IWA6 AC022493.2-201ENST00000506122 481 ntBASIC1.77□□□□□ -2.13
CCDC60Q8IWA6 RNU6-264P-201ENST00000517134 104 ntBASIC1.77□□□□□ -2.13
CCDC60Q8IWA6 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.77□□□□□ -2.13
CCDC60Q8IWA6 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
CCDC60Q8IWA6 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.77□□□□□ -2.13
CCDC60Q8IWA6 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CCDC60Q8IWA6 RNU1-62P-201ENST00000362599 164 ntBASIC1.76□□□□□ -2.13
CCDC60Q8IWA6 Y_RNA.67-201ENST00000362870 100 ntBASIC1.76□□□□□ -2.13
CCDC60Q8IWA6 Y_RNA.179-201ENST00000363844 90 ntBASIC1.76□□□□□ -2.13
CCDC60Q8IWA6 Y_RNA.263-201ENST00000364659 114 ntBASIC1.76□□□□□ -2.13
CCDC60Q8IWA6 Y_RNA.364-201ENST00000365532 101 ntBASIC1.76□□□□□ -2.13
CCDC60Q8IWA6 RNU6-793P-201ENST00000384233 104 ntBASIC1.76□□□□□ -2.13
CCDC60Q8IWA6 RNA5SP212-201ENST00000391223 107 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms