Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 RPL23AP36-201ENST00000413895 458 ntBASIC2.35□□□□□ -2.03
HERC6Q8IVU3 CYCSP49-201ENST00000420810 319 ntBASIC2.35□□□□□ -2.03
HERC6Q8IVU3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.35□□□□□ -2.03
HERC6Q8IVU3 AL445646.1-201ENST00000431784 216 ntBASIC2.35□□□□□ -2.03
HERC6Q8IVU3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.35□□□□□ -2.03
HERC6Q8IVU3 RNU6-976P-201ENST00000516086 111 ntBASIC2.35□□□□□ -2.03
HERC6Q8IVU3 AC087441.2-201ENST00000529141 262 ntBASIC2.35□□□□□ -2.03
HERC6Q8IVU3 UBL5P4-201ENST00000562584 236 ntBASIC2.35□□□□□ -2.03
HERC6Q8IVU3 AC007229.1-201ENST00000590455 412 ntBASIC2.35□□□□□ -2.03
HERC6Q8IVU3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.35□□□□□ -2.03
HERC6Q8IVU3 MIR6845-201ENST00000613182 61 ntBASIC2.35□□□□□ -2.03
HERC6Q8IVU3 AC007485.1-201ENST00000616755 206 ntBASIC2.35□□□□□ -2.03
HERC6Q8IVU3 AL078596.1-201ENST00000624856 447 ntBASIC2.35□□□□□ -2.03
HERC6Q8IVU3 LINC02555-201ENST00000563933 1951 ntBASIC2.35□□□□□ -2.03
HERC6Q8IVU3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
HERC6Q8IVU3 AC009487.4-201ENST00000624969 3585 ntBASIC2.35□□□□□ -2.03
HERC6Q8IVU3 AC005336.3-201ENST00000623833 2679 ntBASIC2.35□□□□□ -2.03
HERC6Q8IVU3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
HERC6Q8IVU3 RNU1-58P-201ENST00000362413 163 ntBASIC2.34□□□□□ -2.03
HERC6Q8IVU3 Y_RNA.28-201ENST00000362554 111 ntBASIC2.34□□□□□ -2.03
HERC6Q8IVU3 MIR518A2-201ENST00000384966 87 ntBASIC2.34□□□□□ -2.03
HERC6Q8IVU3 MIR10B-201ENST00000385011 110 ntBASIC2.34□□□□□ -2.03
HERC6Q8IVU3 RNA5SP465-201ENST00000391195 109 ntBASIC2.34□□□□□ -2.03
HERC6Q8IVU3 AL033519.2-201ENST00000403958 392 ntBASIC2.34□□□□□ -2.03
HERC6Q8IVU3 Y_RNA.605-201ENST00000410577 105 ntBASIC2.34□□□□□ -2.03
HERC6Q8IVU3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.34□□□□□ -2.03
HERC6Q8IVU3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.34□□□□□ -2.03
HERC6Q8IVU3 RNU1-131P-201ENST00000458943 161 ntBASIC2.34□□□□□ -2.03
HERC6Q8IVU3 AC105758.1-201ENST00000506038 399 ntBASIC2.34□□□□□ -2.03
HERC6Q8IVU3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.34□□□□□ -2.03
HERC6Q8IVU3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.34□□□□□ -2.03
HERC6Q8IVU3 SNORA31.25-201ENST00000517242 134 ntBASIC2.34□□□□□ -2.03
HERC6Q8IVU3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.34□□□□□ -2.03
HERC6Q8IVU3 Y_RNA.812-201ENST00000610788 101 ntBASIC2.34□□□□□ -2.03
HERC6Q8IVU3 MIR1244-1-201ENST00000612829 85 ntBASIC2.34□□□□□ -2.03
HERC6Q8IVU3 Y_RNA.784-201ENST00000613803 101 ntBASIC2.34□□□□□ -2.03
HERC6Q8IVU3 Y_RNA.787-201ENST00000616522 101 ntBASIC2.34□□□□□ -2.03
HERC6Q8IVU3 Y_RNA.780-201ENST00000617336 101 ntBASIC2.34□□□□□ -2.03
HERC6Q8IVU3 Y_RNA.801-201ENST00000619005 101 ntBASIC2.34□□□□□ -2.03
HERC6Q8IVU3 AC012640.5-201ENST00000623897 319 ntBASIC2.34□□□□□ -2.03
HERC6Q8IVU3 MIR1244-3-201ENST00000635744 85 ntBASIC2.34□□□□□ -2.03
HERC6Q8IVU3 MIR1244-2-201ENST00000636449 85 ntBASIC2.34□□□□□ -2.03
HERC6Q8IVU3 MIR1244-4-202ENST00000636813 85 ntBASIC2.34□□□□□ -2.03
HERC6Q8IVU3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
HERC6Q8IVU3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
HERC6Q8IVU3 RNU6-874P-201ENST00000362390 105 ntBASIC2.33□□□□□ -2.04
HERC6Q8IVU3 RNU6-23P-201ENST00000363283 107 ntBASIC2.33□□□□□ -2.04
HERC6Q8IVU3 Y_RNA.358-201ENST00000365491 99 ntBASIC2.33□□□□□ -2.04
HERC6Q8IVU3 Y_RNA.428-201ENST00000384078 102 ntBASIC2.33□□□□□ -2.04
HERC6Q8IVU3 RNY1P14-201ENST00000384426 108 ntBASIC2.33□□□□□ -2.04
HERC6Q8IVU3 RNU11-3P-201ENST00000391111 133 ntBASIC2.33□□□□□ -2.04
HERC6Q8IVU3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.33□□□□□ -2.04
HERC6Q8IVU3 AL160004.2-201ENST00000432935 350 ntBASIC2.33□□□□□ -2.04
HERC6Q8IVU3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.33□□□□□ -2.04
HERC6Q8IVU3 MTND4P19-201ENST00000446659 478 ntBASIC2.33□□□□□ -2.04
HERC6Q8IVU3 CHEK2P4-201ENST00000450340 246 ntBASIC2.33□□□□□ -2.04
HERC6Q8IVU3 AC108729.3-201ENST00000513484 108 ntBASIC2.33□□□□□ -2.04
HERC6Q8IVU3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.33□□□□□ -2.04
HERC6Q8IVU3 Y_RNA.683-201ENST00000516508 93 ntBASIC2.33□□□□□ -2.04
HERC6Q8IVU3 RNU1-117P-201ENST00000517041 158 ntBASIC2.33□□□□□ -2.04
HERC6Q8IVU3 IGLV3-17-201ENST00000519099 244 ntBASIC2.33□□□□□ -2.04
HERC6Q8IVU3 AC093023.1-201ENST00000547375 507 ntBASIC2.33□□□□□ -2.04
HERC6Q8IVU3 AC121758.2-201ENST00000553271 193 ntBASIC2.33□□□□□ -2.04
HERC6Q8IVU3 MIR4498-201ENST00000577599 66 ntBASIC2.33□□□□□ -2.04
HERC6Q8IVU3 AC009831.4-201ENST00000620744 325 ntBASIC2.33□□□□□ -2.04
HERC6Q8IVU3 AC068205.3-201ENST00000636385 468 ntBASIC2.33□□□□□ -2.04
HERC6Q8IVU3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
HERC6Q8IVU3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.32□□□□□ -2.04
HERC6Q8IVU3 RNU6-222P-201ENST00000362438 107 ntBASIC2.32□□□□□ -2.04
HERC6Q8IVU3 Y_RNA.148-201ENST00000363557 117 ntBASIC2.32□□□□□ -2.04
HERC6Q8IVU3 RNU6-879P-201ENST00000364328 108 ntBASIC2.32□□□□□ -2.04
HERC6Q8IVU3 Y_RNA.226-201ENST00000364337 114 ntBASIC2.32□□□□□ -2.04
HERC6Q8IVU3 Y_RNA.314-201ENST00000365114 102 ntBASIC2.32□□□□□ -2.04
HERC6Q8IVU3 RNU6-281P-201ENST00000384212 103 ntBASIC2.32□□□□□ -2.04
HERC6Q8IVU3 Y_RNA.557-201ENST00000384680 107 ntBASIC2.32□□□□□ -2.04
HERC6Q8IVU3 AC139712.2-201ENST00000424302 339 ntBASIC2.32□□□□□ -2.04
HERC6Q8IVU3 AL357134.1-201ENST00000445848 426 ntBASIC2.32□□□□□ -2.04
HERC6Q8IVU3 Y_RNA.661-201ENST00000516003 99 ntBASIC2.32□□□□□ -2.04
HERC6Q8IVU3 SNORD116.3-201ENST00000517176 78 ntBASIC2.32□□□□□ -2.04
HERC6Q8IVU3 RN7SKP295-201ENST00000517264 153 ntBASIC2.32□□□□□ -2.04
HERC6Q8IVU3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.32□□□□□ -2.04
HERC6Q8IVU3 AL442663.2-201ENST00000554385 511 ntBASIC2.32□□□□□ -2.04
HERC6Q8IVU3 AC138305.3-201ENST00000624988 240 ntBASIC2.32□□□□□ -2.04
HERC6Q8IVU3 AC245060.5-201ENST00000610778 3293 ntBASIC2.31□□□□□ -2.04
HERC6Q8IVU3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HERC6Q8IVU3 Y_RNA.80-201ENST00000362996 102 ntBASIC2.31□□□□□ -2.04
HERC6Q8IVU3 SNORA63-201ENST00000363450 132 ntBASIC2.31□□□□□ -2.04
HERC6Q8IVU3 RNY3P11-201ENST00000364153 102 ntBASIC2.31□□□□□ -2.04
HERC6Q8IVU3 SNORA33.2-201ENST00000365413 134 ntBASIC2.31□□□□□ -2.04
HERC6Q8IVU3 Y_RNA.485-201ENST00000384395 102 ntBASIC2.31□□□□□ -2.04
HERC6Q8IVU3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HERC6Q8IVU3 AL590004.1-201ENST00000405321 300 ntBASIC2.31□□□□□ -2.04
HERC6Q8IVU3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.31□□□□□ -2.04
HERC6Q8IVU3 MCFD2P1-201ENST00000417812 300 ntBASIC2.31□□□□□ -2.04
HERC6Q8IVU3 EIF1P2-201ENST00000428233 350 ntBASIC2.31□□□□□ -2.04
HERC6Q8IVU3 AL445305.1-201ENST00000432577 575 ntBASIC2.31□□□□□ -2.04
HERC6Q8IVU3 AL118496.2-201ENST00000448300 230 ntBASIC2.31□□□□□ -2.04
HERC6Q8IVU3 AC067942.3-201ENST00000512025 362 ntBASIC2.31□□□□□ -2.04
HERC6Q8IVU3 RNU6-1053P-201ENST00000515930 101 ntBASIC2.31□□□□□ -2.04
HERC6Q8IVU3 RNU6-1137P-201ENST00000517073 99 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms