Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 RNA5SP504-201ENST00000410676 117 ntBASIC2.79□□□□□ -1.96
VRK3Q8IV63 EBAG9P1-201ENST00000418955 543 ntBASIC2.79□□□□□ -1.96
VRK3Q8IV63 RNU6-313P-201ENST00000516317 112 ntBASIC2.79□□□□□ -1.96
VRK3Q8IV63 SNORD116-25-201ENST00000516517 92 ntBASIC2.79□□□□□ -1.96
VRK3Q8IV63 EIF4A1P12-201ENST00000551910 141 ntBASIC2.79□□□□□ -1.96
VRK3Q8IV63 AC105137.2-201ENST00000569073 466 ntBASIC2.79□□□□□ -1.96
VRK3Q8IV63 MIR3684-201ENST00000579779 74 ntBASIC2.79□□□□□ -1.96
VRK3Q8IV63 RPS15AP11-201ENST00000594193 385 ntBASIC2.79□□□□□ -1.96
VRK3Q8IV63 AC093732.2-201ENST00000607950 274 ntBASIC2.79□□□□□ -1.96
VRK3Q8IV63 AC073308.1-201ENST00000623696 305 ntBASIC2.79□□□□□ -1.96
VRK3Q8IV63 AC091895.1-201ENST00000624494 256 ntBASIC2.79□□□□□ -1.96
VRK3Q8IV63 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.79□□□□□ -1.96
VRK3Q8IV63 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.79□□□□□ -1.96
VRK3Q8IV63 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.79□□□□□ -1.96
VRK3Q8IV63 AC096644.4-201ENST00000563417 2912 ntBASIC2.79□□□□□ -1.96
VRK3Q8IV63 AC010680.1-201ENST00000590024 3590 ntBASIC2.79□□□□□ -1.96
VRK3Q8IV63 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
VRK3Q8IV63 SNORD115-30-201ENST00000364117 82 ntBASIC2.78□□□□□ -1.96
VRK3Q8IV63 Y_RNA.361-201ENST00000365515 120 ntBASIC2.78□□□□□ -1.96
VRK3Q8IV63 MIR512-1-201ENST00000384913 84 ntBASIC2.78□□□□□ -1.96
VRK3Q8IV63 MIR186-201ENST00000384988 86 ntBASIC2.78□□□□□ -1.96
VRK3Q8IV63 MIR626-201ENST00000385032 94 ntBASIC2.78□□□□□ -1.96
VRK3Q8IV63 SNORA26.7-201ENST00000391288 122 ntBASIC2.78□□□□□ -1.96
VRK3Q8IV63 RNU6-257P-201ENST00000410238 98 ntBASIC2.78□□□□□ -1.96
VRK3Q8IV63 AL135938.1-201ENST00000443141 297 ntBASIC2.78□□□□□ -1.96
VRK3Q8IV63 RPL23AP70-201ENST00000483361 460 ntBASIC2.78□□□□□ -1.96
VRK3Q8IV63 SCARNA13-201ENST00000516672 275 ntBASIC2.78□□□□□ -1.96
VRK3Q8IV63 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.78□□□□□ -1.96
VRK3Q8IV63 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.78□□□□□ -1.96
VRK3Q8IV63 AL365222.1-201ENST00000614661 98 ntBASIC2.78□□□□□ -1.96
VRK3Q8IV63 AC013791.1-201ENST00000616619 62 ntBASIC2.78□□□□□ -1.96
VRK3Q8IV63 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.78□□□□□ -1.96
VRK3Q8IV63 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
VRK3Q8IV63 AL136164.4-201ENST00000625013 2135 ntBASIC2.78□□□□□ -1.96
VRK3Q8IV63 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.78□□□□□ -1.96
VRK3Q8IV63 RNU4-15P-201ENST00000362613 141 ntBASIC2.77□□□□□ -1.97
VRK3Q8IV63 SNORA67.2-201ENST00000384300 149 ntBASIC2.77□□□□□ -1.97
VRK3Q8IV63 RNU6-851P-201ENST00000384565 107 ntBASIC2.77□□□□□ -1.97
VRK3Q8IV63 MIR181B1-201ENST00000385240 110 ntBASIC2.77□□□□□ -1.97
VRK3Q8IV63 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
VRK3Q8IV63 SNORA26.5-201ENST00000391215 123 ntBASIC2.77□□□□□ -1.97
VRK3Q8IV63 AL591034.1-201ENST00000407447 340 ntBASIC2.77□□□□□ -1.97
VRK3Q8IV63 Z92545.1-201ENST00000411782 234 ntBASIC2.77□□□□□ -1.97
VRK3Q8IV63 PTGES3P4-201ENST00000426243 356 ntBASIC2.77□□□□□ -1.97
VRK3Q8IV63 RPL31P41-201ENST00000477967 372 ntBASIC2.77□□□□□ -1.97
VRK3Q8IV63 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.77□□□□□ -1.97
VRK3Q8IV63 AC091826.1-201ENST00000514065 313 ntBASIC2.77□□□□□ -1.97
VRK3Q8IV63 RN7SKP164-201ENST00000516138 266 ntBASIC2.77□□□□□ -1.97
VRK3Q8IV63 RNU6-426P-201ENST00000516464 97 ntBASIC2.77□□□□□ -1.97
VRK3Q8IV63 DEFB131C-201ENST00000528817 165 ntBASIC2.77□□□□□ -1.97
VRK3Q8IV63 AC021269.2-201ENST00000532318 330 ntBASIC2.77□□□□□ -1.97
VRK3Q8IV63 AC107016.2-201ENST00000547968 190 ntBASIC2.77□□□□□ -1.97
VRK3Q8IV63 MIR4431-201ENST00000579990 94 ntBASIC2.77□□□□□ -1.97
VRK3Q8IV63 MIR4744-201ENST00000581563 82 ntBASIC2.77□□□□□ -1.97
VRK3Q8IV63 AC090115.4-201ENST00000609970 188 ntBASIC2.77□□□□□ -1.97
VRK3Q8IV63 TCL6_2.1-201ENST00000615162 119 ntBASIC2.77□□□□□ -1.97
VRK3Q8IV63 AL137790.1-201ENST00000634283 177 ntBASIC2.77□□□□□ -1.97
VRK3Q8IV63 AC068205.3-201ENST00000636385 468 ntBASIC2.77□□□□□ -1.97
VRK3Q8IV63 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.77□□□□□ -1.97
VRK3Q8IV63 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
VRK3Q8IV63 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
VRK3Q8IV63 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
VRK3Q8IV63 RNU6-103P-201ENST00000363686 107 ntBASIC2.76□□□□□ -1.97
VRK3Q8IV63 snoU2_19.4-201ENST00000364329 80 ntBASIC2.76□□□□□ -1.97
VRK3Q8IV63 RNU6-417P-201ENST00000384712 107 ntBASIC2.76□□□□□ -1.97
VRK3Q8IV63 RNU6-19P-201ENST00000384718 107 ntBASIC2.76□□□□□ -1.97
VRK3Q8IV63 RNU6-578P-201ENST00000390980 103 ntBASIC2.76□□□□□ -1.97
VRK3Q8IV63 AL031003.1-201ENST00000404229 172 ntBASIC2.76□□□□□ -1.97
VRK3Q8IV63 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.76□□□□□ -1.97
VRK3Q8IV63 HMGN2P20-201ENST00000437531 273 ntBASIC2.76□□□□□ -1.97
VRK3Q8IV63 snoU13.28-201ENST00000459235 104 ntBASIC2.76□□□□□ -1.97
VRK3Q8IV63 AC003982.1-202ENST00000469928 248 ntBASIC2.76□□□□□ -1.97
VRK3Q8IV63 AC107626.1-201ENST00000471084 183 ntBASIC2.76□□□□□ -1.97
VRK3Q8IV63 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.76□□□□□ -1.97
VRK3Q8IV63 AC079600.2-201ENST00000550076 130 ntBASIC2.76□□□□□ -1.97
VRK3Q8IV63 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.76□□□□□ -1.97
VRK3Q8IV63 AC011471.1-201ENST00000585766 187 ntBASIC2.76□□□□□ -1.97
VRK3Q8IV63 AL033523.1-201ENST00000605153 153 ntBASIC2.76□□□□□ -1.97
VRK3Q8IV63 MIR6076-201ENST00000617521 113 ntBASIC2.76□□□□□ -1.97
VRK3Q8IV63 AC005562.2-201ENST00000618264 111 ntBASIC2.76□□□□□ -1.97
VRK3Q8IV63 AC134026.1-201ENST00000623249 2239 ntBASIC2.76□□□□□ -1.97
VRK3Q8IV63 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
VRK3Q8IV63 AC010329.5-201ENST00000623497 2174 ntBASIC2.76□□□□□ -1.97
VRK3Q8IV63 RNU6-151P-201ENST00000364158 107 ntBASIC2.75□□□□□ -1.97
VRK3Q8IV63 Y_RNA.368-201ENST00000365547 113 ntBASIC2.75□□□□□ -1.97
VRK3Q8IV63 AL355497.1-201ENST00000406262 551 ntBASIC2.75□□□□□ -1.97
VRK3Q8IV63 Y_RNA.629-201ENST00000411368 105 ntBASIC2.75□□□□□ -1.97
VRK3Q8IV63 AL139281.1-201ENST00000422120 335 ntBASIC2.75□□□□□ -1.97
VRK3Q8IV63 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.75□□□□□ -1.97
VRK3Q8IV63 CR769767.1-201ENST00000436337 346 ntBASIC2.75□□□□□ -1.97
VRK3Q8IV63 AC004386.2-201ENST00000441858 148 ntBASIC2.75□□□□□ -1.97
VRK3Q8IV63 RPS20P10-201ENST00000451209 253 ntBASIC2.75□□□□□ -1.97
VRK3Q8IV63 RNU7-23P-201ENST00000459465 62 ntBASIC2.75□□□□□ -1.97
VRK3Q8IV63 Y_RNA.797-201ENST00000515977 94 ntBASIC2.75□□□□□ -1.97
VRK3Q8IV63 MIR548X2-201ENST00000579776 100 ntBASIC2.75□□□□□ -1.97
VRK3Q8IV63 AL137843.1-201ENST00000605078 385 ntBASIC2.75□□□□□ -1.97
VRK3Q8IV63 SNORD11B-201ENST00000607707 90 ntBASIC2.75□□□□□ -1.97
VRK3Q8IV63 AC069294.1-201ENST00000608397 350 ntBASIC2.75□□□□□ -1.97
VRK3Q8IV63 AL138880.2-201ENST00000616214 239 ntBASIC2.75□□□□□ -1.97
VRK3Q8IV63 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms