Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RNU6-661P-201ENST00000362409 107 ntBASIC1.84□□□□□ -2.11
NUP54Q7Z3B4 RNU6-99P-201ENST00000364721 107 ntBASIC1.84□□□□□ -2.11
NUP54Q7Z3B4 AL079342.1-201ENST00000401460 267 ntBASIC1.84□□□□□ -2.11
NUP54Q7Z3B4 AL139156.1-201ENST00000412785 841 ntBASIC1.84□□□□□ -2.11
NUP54Q7Z3B4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.84□□□□□ -2.11
NUP54Q7Z3B4 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.84□□□□□ -2.11
NUP54Q7Z3B4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.84□□□□□ -2.11
NUP54Q7Z3B4 RPL23AP7-203ENST00000449021 469 ntBASIC1.84□□□□□ -2.11
NUP54Q7Z3B4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.84□□□□□ -2.11
NUP54Q7Z3B4 RNU7-87P-201ENST00000459343 62 ntBASIC1.84□□□□□ -2.11
NUP54Q7Z3B4 MTND3P22-201ENST00000510932 243 ntBASIC1.84□□□□□ -2.11
NUP54Q7Z3B4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.84□□□□□ -2.11
NUP54Q7Z3B4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.84□□□□□ -2.11
NUP54Q7Z3B4 AC093023.1-201ENST00000547375 507 ntBASIC1.84□□□□□ -2.11
NUP54Q7Z3B4 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.84□□□□□ -2.11
NUP54Q7Z3B4 AC112487.2-201ENST00000637950 304 ntBASIC1.84□□□□□ -2.11
NUP54Q7Z3B4 AP000553.5-201ENST00000641933 54 ntBASIC1.84□□□□□ -2.11
NUP54Q7Z3B4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.84□□□□□ -2.12
NUP54Q7Z3B4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
NUP54Q7Z3B4 SNORD114-1-201ENST00000362705 72 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 U3.8-201ENST00000363675 217 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 RNA5SP160-201ENST00000364866 120 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 Y_RNA.557-201ENST00000384680 107 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 MIR625-201ENST00000385047 85 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 AC019129.1-201ENST00000403786 261 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 RNU2-2P-201ENST00000410396 191 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 AC236972.2-201ENST00000434979 310 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 AC092473.1-201ENST00000441098 221 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 AC016717.1-201ENST00000448918 286 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 ATP5J2P3-201ENST00000451550 258 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 RNU7-152P-201ENST00000458982 64 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 RNU7-57P-201ENST00000459540 60 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 SNORD19B-201ENST00000459623 84 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 Y_RNA.683-201ENST00000516508 93 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 SUMO2P18-201ENST00000518873 252 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 MIR5089-201ENST00000580047 84 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 MZT1P2-201ENST00000604387 248 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 AC012493.3-201ENST00000604494 112 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 AC080078.3-201ENST00000605407 463 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 U2.15-201ENST00000611544 191 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 MIR1244-1-201ENST00000612829 85 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 U2.16-201ENST00000613119 191 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 U2.12-201ENST00000613778 191 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 U2.20-201ENST00000613956 192 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 AC083806.3-201ENST00000614016 455 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 U2.9-201ENST00000615427 191 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 U2.11-201ENST00000616345 191 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 U2.2-201ENST00000616535 191 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 U2.3-201ENST00000617785 191 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 AC126177.8-201ENST00000618339 1015 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 U2.19-201ENST00000618602 191 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 RNU2-1-201ENST00000618664 191 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 U2.6-201ENST00000619225 191 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 U2.5-201ENST00000619465 191 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 U2.10-201ENST00000620268 191 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 AC022513.1-201ENST00000624512 117 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 MIR1244-3-201ENST00000635744 85 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 MIR1244-2-201ENST00000636449 85 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 MIR1244-4-202ENST00000636813 85 ntBASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
NUP54Q7Z3B4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
NUP54Q7Z3B4 RNU6-727P-201ENST00000363592 107 ntBASIC1.82□□□□□ -2.12
NUP54Q7Z3B4 Y_RNA.415-201ENST00000384012 112 ntBASIC1.82□□□□□ -2.12
NUP54Q7Z3B4 RNU6-1156P-201ENST00000410365 100 ntBASIC1.82□□□□□ -2.12
NUP54Q7Z3B4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.82□□□□□ -2.12
NUP54Q7Z3B4 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.82□□□□□ -2.12
NUP54Q7Z3B4 MIR2053-201ENST00000459295 91 ntBASIC1.82□□□□□ -2.12
NUP54Q7Z3B4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.82□□□□□ -2.12
NUP54Q7Z3B4 RNU6-120P-201ENST00000516077 103 ntBASIC1.82□□□□□ -2.12
NUP54Q7Z3B4 MIR2355-201ENST00000517199 87 ntBASIC1.82□□□□□ -2.12
NUP54Q7Z3B4 CYCSP23-201ENST00000519781 313 ntBASIC1.82□□□□□ -2.12
NUP54Q7Z3B4 CBX3P4-201ENST00000538909 354 ntBASIC1.82□□□□□ -2.12
NUP54Q7Z3B4 AC093027.1-201ENST00000546698 429 ntBASIC1.82□□□□□ -2.12
NUP54Q7Z3B4 AC125232.2-201ENST00000592457 143 ntBASIC1.82□□□□□ -2.12
NUP54Q7Z3B4 AC084781.2-201ENST00000615568 161 ntBASIC1.82□□□□□ -2.12
NUP54Q7Z3B4 snoZ196.1-201ENST00000625269 89 ntBASIC1.82□□□□□ -2.12
NUP54Q7Z3B4 MTND5P35-201ENST00000557537 1720 ntBASIC1.82□□□□□ -2.12
NUP54Q7Z3B4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.82□□□□□ -2.12
NUP54Q7Z3B4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
NUP54Q7Z3B4 MTND5P10-201ENST00000603719 1809 ntBASIC1.82□□□□□ -2.12
NUP54Q7Z3B4 Y_RNA.67-201ENST00000362870 100 ntBASIC1.81□□□□□ -2.12
NUP54Q7Z3B4 Y_RNA.358-201ENST00000365491 99 ntBASIC1.81□□□□□ -2.12
NUP54Q7Z3B4 MIR329-1-201ENST00000385028 80 ntBASIC1.81□□□□□ -2.12
NUP54Q7Z3B4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
NUP54Q7Z3B4 RNA5SP100-201ENST00000410903 110 ntBASIC1.81□□□□□ -2.12
NUP54Q7Z3B4 RNA5SP59-201ENST00000410922 110 ntBASIC1.81□□□□□ -2.12
NUP54Q7Z3B4 RNU6-1001P-201ENST00000411265 100 ntBASIC1.81□□□□□ -2.12
NUP54Q7Z3B4 HSPE1P21-201ENST00000438283 308 ntBASIC1.81□□□□□ -2.12
NUP54Q7Z3B4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.81□□□□□ -2.12
NUP54Q7Z3B4 AC010095.1-201ENST00000443543 144 ntBASIC1.81□□□□□ -2.12
NUP54Q7Z3B4 RNU7-4P-201ENST00000516961 62 ntBASIC1.81□□□□□ -2.12
NUP54Q7Z3B4 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.81□□□□□ -2.12
NUP54Q7Z3B4 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.81□□□□□ -2.12
NUP54Q7Z3B4 AL353149.1-201ENST00000610667 244 ntBASIC1.81□□□□□ -2.12
NUP54Q7Z3B4 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms