Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 SNORA33.2-201ENST00000365413 134 ntBASIC1.78□□□□□ -2.12
NHLRC1Q6VVB1 RNU6-842P-201ENST00000384269 107 ntBASIC1.78□□□□□ -2.12
NHLRC1Q6VVB1 RNU6-601P-201ENST00000384540 107 ntBASIC1.78□□□□□ -2.12
NHLRC1Q6VVB1 MIR559-201ENST00000385188 96 ntBASIC1.78□□□□□ -2.12
NHLRC1Q6VVB1 MTCYBP4-201ENST00000401524 249 ntBASIC1.78□□□□□ -2.12
NHLRC1Q6VVB1 AC236972.2-201ENST00000434979 310 ntBASIC1.78□□□□□ -2.12
NHLRC1Q6VVB1 AC004386.2-201ENST00000441858 148 ntBASIC1.78□□□□□ -2.12
NHLRC1Q6VVB1 AC009237.7-201ENST00000447357 229 ntBASIC1.78□□□□□ -2.12
NHLRC1Q6VVB1 ATP5J2P3-201ENST00000451550 258 ntBASIC1.78□□□□□ -2.12
NHLRC1Q6VVB1 RNU6-327P-201ENST00000516270 127 ntBASIC1.78□□□□□ -2.12
NHLRC1Q6VVB1 RNA5SP384-201ENST00000516615 116 ntBASIC1.78□□□□□ -2.12
NHLRC1Q6VVB1 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.78□□□□□ -2.12
NHLRC1Q6VVB1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.78□□□□□ -2.12
NHLRC1Q6VVB1 GNAI2P1-201ENST00000541815 315 ntBASIC1.78□□□□□ -2.12
NHLRC1Q6VVB1 AC018462.2-201ENST00000605375 395 ntBASIC1.78□□□□□ -2.12
NHLRC1Q6VVB1 MIR6128-201ENST00000615528 109 ntBASIC1.78□□□□□ -2.12
NHLRC1Q6VVB1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.77□□□□□ -2.13
NHLRC1Q6VVB1 Y_RNA.151-201ENST00000363566 112 ntBASIC1.77□□□□□ -2.13
NHLRC1Q6VVB1 Y_RNA.187-201ENST00000363918 113 ntBASIC1.77□□□□□ -2.13
NHLRC1Q6VVB1 RNU6-245P-201ENST00000384020 107 ntBASIC1.77□□□□□ -2.13
NHLRC1Q6VVB1 RNU6-890P-201ENST00000384121 107 ntBASIC1.77□□□□□ -2.13
NHLRC1Q6VVB1 Y_RNA.445-201ENST00000384168 102 ntBASIC1.77□□□□□ -2.13
NHLRC1Q6VVB1 Y_RNA.482-201ENST00000384377 111 ntBASIC1.77□□□□□ -2.13
NHLRC1Q6VVB1 MIR517A-201ENST00000385001 87 ntBASIC1.77□□□□□ -2.13
NHLRC1Q6VVB1 Y_RNA.594-201ENST00000410373 140 ntBASIC1.77□□□□□ -2.13
NHLRC1Q6VVB1 USP9YP30-201ENST00000430729 455 ntBASIC1.77□□□□□ -2.13
NHLRC1Q6VVB1 AC069257.2-201ENST00000441819 155 ntBASIC1.77□□□□□ -2.13
NHLRC1Q6VVB1 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.77□□□□□ -2.13
NHLRC1Q6VVB1 RPL30P15-201ENST00000457129 321 ntBASIC1.77□□□□□ -2.13
NHLRC1Q6VVB1 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.77□□□□□ -2.13
NHLRC1Q6VVB1 RPL23AP75-201ENST00000491601 451 ntBASIC1.77□□□□□ -2.13
NHLRC1Q6VVB1 RN7SL274P-201ENST00000492268 272 ntBASIC1.77□□□□□ -2.13
NHLRC1Q6VVB1 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.77□□□□□ -2.13
NHLRC1Q6VVB1 AC097473.1-201ENST00000508142 408 ntBASIC1.77□□□□□ -2.13
NHLRC1Q6VVB1 AC116337.1-201ENST00000509680 687 ntBASIC1.77□□□□□ -2.13
NHLRC1Q6VVB1 AC067942.3-201ENST00000512025 362 ntBASIC1.77□□□□□ -2.13
NHLRC1Q6VVB1 Y_RNA.661-201ENST00000516003 99 ntBASIC1.77□□□□□ -2.13
NHLRC1Q6VVB1 RNU6-1146P-201ENST00000516282 102 ntBASIC1.77□□□□□ -2.13
NHLRC1Q6VVB1 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.77□□□□□ -2.13
NHLRC1Q6VVB1 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.77□□□□□ -2.13
NHLRC1Q6VVB1 AC011494.1-201ENST00000596454 237 ntBASIC1.77□□□□□ -2.13
NHLRC1Q6VVB1 AC016727.2-201ENST00000603988 621 ntBASIC1.77□□□□□ -2.13
NHLRC1Q6VVB1 AC069114.2-201ENST00000604699 304 ntBASIC1.77□□□□□ -2.13
NHLRC1Q6VVB1 AL162730.1-201ENST00000605734 292 ntBASIC1.77□□□□□ -2.13
NHLRC1Q6VVB1 AC009229.3-201ENST00000608056 282 ntBASIC1.77□□□□□ -2.13
NHLRC1Q6VVB1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.77□□□□□ -2.13
NHLRC1Q6VVB1 ZNF72P-201ENST00000425869 1908 ntBASIC1.77□□□□□ -2.13
NHLRC1Q6VVB1 BX322639.1-202ENST00000423987 2213 ntBASIC1.76□□□□□ -2.13
NHLRC1Q6VVB1 Y_RNA.112-201ENST00000363250 102 ntBASIC1.76□□□□□ -2.13
NHLRC1Q6VVB1 RNU6-137P-201ENST00000363680 108 ntBASIC1.76□□□□□ -2.13
NHLRC1Q6VVB1 SNORD115-32-201ENST00000364079 82 ntBASIC1.76□□□□□ -2.13
NHLRC1Q6VVB1 RNU6-1160P-201ENST00000384546 104 ntBASIC1.76□□□□□ -2.13
NHLRC1Q6VVB1 RNU6-331P-201ENST00000384724 107 ntBASIC1.76□□□□□ -2.13
NHLRC1Q6VVB1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
NHLRC1Q6VVB1 SUMO2P12-201ENST00000405924 140 ntBASIC1.76□□□□□ -2.13
NHLRC1Q6VVB1 MTCO2P27-201ENST00000420740 428 ntBASIC1.76□□□□□ -2.13
NHLRC1Q6VVB1 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.76□□□□□ -2.13
NHLRC1Q6VVB1 AC018865.2-201ENST00000423631 129 ntBASIC1.76□□□□□ -2.13
NHLRC1Q6VVB1 FTH1P12-201ENST00000432137 551 ntBASIC1.76□□□□□ -2.13
NHLRC1Q6VVB1 AL591806.2-201ENST00000433122 173 ntBASIC1.76□□□□□ -2.13
NHLRC1Q6VVB1 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
NHLRC1Q6VVB1 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.76□□□□□ -2.13
NHLRC1Q6VVB1 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.76□□□□□ -2.13
NHLRC1Q6VVB1 RNU6-1016P-201ENST00000516689 94 ntBASIC1.76□□□□□ -2.13
NHLRC1Q6VVB1 RNU1-54P-201ENST00000517181 120 ntBASIC1.76□□□□□ -2.13
NHLRC1Q6VVB1 AL442663.2-201ENST00000554385 511 ntBASIC1.76□□□□□ -2.13
NHLRC1Q6VVB1 AC022254.1-201ENST00000567857 235 ntBASIC1.76□□□□□ -2.13
NHLRC1Q6VVB1 MIR4273-201ENST00000582824 84 ntBASIC1.76□□□□□ -2.13
NHLRC1Q6VVB1 SNRPGP19-201ENST00000603826 189 ntBASIC1.76□□□□□ -2.13
NHLRC1Q6VVB1 AC016925.2-201ENST00000605108 242 ntBASIC1.76□□□□□ -2.13
NHLRC1Q6VVB1 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.76□□□□□ -2.13
NHLRC1Q6VVB1 AC007485.1-201ENST00000616755 206 ntBASIC1.76□□□□□ -2.13
NHLRC1Q6VVB1 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.76□□□□□ -2.13
NHLRC1Q6VVB1 MTND5P9-201ENST00000503854 1755 ntBASIC1.75□□□□□ -2.13
NHLRC1Q6VVB1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.75□□□□□ -2.13
NHLRC1Q6VVB1 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
NHLRC1Q6VVB1 RNU6-1040P-201ENST00000383974 107 ntBASIC1.75□□□□□ -2.13
NHLRC1Q6VVB1 Y_RNA.463-201ENST00000384271 102 ntBASIC1.75□□□□□ -2.13
NHLRC1Q6VVB1 RNU6-541P-201ENST00000384709 110 ntBASIC1.75□□□□□ -2.13
NHLRC1Q6VVB1 MIR153-2-201ENST00000385225 87 ntBASIC1.75□□□□□ -2.13
NHLRC1Q6VVB1 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.75□□□□□ -2.13
NHLRC1Q6VVB1 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.75□□□□□ -2.13
NHLRC1Q6VVB1 MRPS18CP6-201ENST00000423587 223 ntBASIC1.75□□□□□ -2.13
NHLRC1Q6VVB1 AL160004.2-201ENST00000432935 350 ntBASIC1.75□□□□□ -2.13
NHLRC1Q6VVB1 MTCO1P44-201ENST00000441935 243 ntBASIC1.75□□□□□ -2.13
NHLRC1Q6VVB1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.75□□□□□ -2.13
NHLRC1Q6VVB1 SNORD5.1-201ENST00000458800 75 ntBASIC1.75□□□□□ -2.13
NHLRC1Q6VVB1 Y_RNA.653-201ENST00000459091 95 ntBASIC1.75□□□□□ -2.13
NHLRC1Q6VVB1 RNU6-1170P-201ENST00000515974 106 ntBASIC1.75□□□□□ -2.13
NHLRC1Q6VVB1 SCARNA16.2-201ENST00000516520 172 ntBASIC1.75□□□□□ -2.13
NHLRC1Q6VVB1 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.75□□□□□ -2.13
NHLRC1Q6VVB1 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.75□□□□□ -2.13
NHLRC1Q6VVB1 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.75□□□□□ -2.13
NHLRC1Q6VVB1 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
NHLRC1Q6VVB1 AC010900.2-201ENST00000604508 210 ntBASIC1.75□□□□□ -2.13
NHLRC1Q6VVB1 AC091925.1-201ENST00000623204 462 ntBASIC1.75□□□□□ -2.13
NHLRC1Q6VVB1 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.75□□□□□ -2.13
NHLRC1Q6VVB1 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.74□□□□□ -2.13
NHLRC1Q6VVB1 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.74□□□□□ -2.13
NHLRC1Q6VVB1 RNU6-661P-201ENST00000362409 107 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms