Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 RNU6-720P-201ENST00000516363 108 ntBASIC1.52□□□□□ -2.17
C11orf88Q6PI97 RNU6-1088P-201ENST00000516850 104 ntBASIC1.52□□□□□ -2.17
C11orf88Q6PI97 TPRKBP2-201ENST00000565969 475 ntBASIC1.52□□□□□ -2.17
C11orf88Q6PI97 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
C11orf88Q6PI97 RNU6-534P-201ENST00000364877 106 ntBASIC1.51□□□□□ -2.17
C11orf88Q6PI97 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.51□□□□□ -2.17
C11orf88Q6PI97 RNU6-1065P-201ENST00000384513 106 ntBASIC1.51□□□□□ -2.17
C11orf88Q6PI97 MIR513A1-201ENST00000385138 129 ntBASIC1.51□□□□□ -2.17
C11orf88Q6PI97 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
C11orf88Q6PI97 RPL30P13-201ENST00000418873 348 ntBASIC1.51□□□□□ -2.17
C11orf88Q6PI97 AP000870.1-201ENST00000472927 406 ntBASIC1.51□□□□□ -2.17
C11orf88Q6PI97 AC091179.3-201ENST00000474761 144 ntBASIC1.51□□□□□ -2.17
C11orf88Q6PI97 AC024995.1-201ENST00000523014 93 ntBASIC1.51□□□□□ -2.17
C11orf88Q6PI97 AC134698.4-201ENST00000523451 826 ntBASIC1.51□□□□□ -2.17
C11orf88Q6PI97 AL590705.4-201ENST00000532209 134 ntBASIC1.51□□□□□ -2.17
C11orf88Q6PI97 SUB1P3-201ENST00000564581 315 ntBASIC1.51□□□□□ -2.17
C11orf88Q6PI97 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.51□□□□□ -2.17
C11orf88Q6PI97 AL365434.2-201ENST00000607979 234 ntBASIC1.51□□□□□ -2.17
C11orf88Q6PI97 AC040896.1-201ENST00000613819 479 ntBASIC1.51□□□□□ -2.17
C11orf88Q6PI97 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.51□□□□□ -2.17
C11orf88Q6PI97 MIR302D-201ENST00000362275 68 ntBASIC1.5□□□□□ -2.17
C11orf88Q6PI97 U3.8-201ENST00000363675 217 ntBASIC1.5□□□□□ -2.17
C11orf88Q6PI97 RNU6-17P-201ENST00000384245 107 ntBASIC1.5□□□□□ -2.17
C11orf88Q6PI97 RNU6-18P-201ENST00000384527 107 ntBASIC1.5□□□□□ -2.17
C11orf88Q6PI97 Y_RNA.516-201ENST00000384541 124 ntBASIC1.5□□□□□ -2.17
C11orf88Q6PI97 RNU6-159P-201ENST00000391080 106 ntBASIC1.5□□□□□ -2.17
C11orf88Q6PI97 MIR1185-2-201ENST00000408687 86 ntBASIC1.5□□□□□ -2.17
C11orf88Q6PI97 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.5□□□□□ -2.17
C11orf88Q6PI97 SDAD1P3-201ENST00000427380 333 ntBASIC1.5□□□□□ -2.17
C11orf88Q6PI97 USP9YP30-201ENST00000430729 455 ntBASIC1.5□□□□□ -2.17
C11orf88Q6PI97 AC027119.1-201ENST00000440877 241 ntBASIC1.5□□□□□ -2.17
C11orf88Q6PI97 RNU6-566P-201ENST00000516790 107 ntBASIC1.5□□□□□ -2.17
C11orf88Q6PI97 SUMO2P16-201ENST00000519475 264 ntBASIC1.5□□□□□ -2.17
C11orf88Q6PI97 AL442163.3-201ENST00000554110 156 ntBASIC1.5□□□□□ -2.17
C11orf88Q6PI97 AL160236.1-201ENST00000556317 195 ntBASIC1.5□□□□□ -2.17
C11orf88Q6PI97 AC110588.1-201ENST00000559699 137 ntBASIC1.5□□□□□ -2.17
C11orf88Q6PI97 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.5□□□□□ -2.17
C11orf88Q6PI97 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.5□□□□□ -2.17
C11orf88Q6PI97 MIR4790-201ENST00000577799 79 ntBASIC1.5□□□□□ -2.17
C11orf88Q6PI97 MZT1P2-201ENST00000604387 248 ntBASIC1.5□□□□□ -2.17
C11orf88Q6PI97 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
C11orf88Q6PI97 MTND5P10-201ENST00000603719 1809 ntBASIC1.5□□□□□ -2.17
C11orf88Q6PI97 Y_RNA.157-201ENST00000363638 102 ntBASIC1.49□□□□□ -2.17
C11orf88Q6PI97 RNU5F-3P-201ENST00000363767 117 ntBASIC1.49□□□□□ -2.17
C11orf88Q6PI97 RNU6-1215P-201ENST00000384441 102 ntBASIC1.49□□□□□ -2.17
C11orf88Q6PI97 AL139396.1-201ENST00000421137 167 ntBASIC1.49□□□□□ -2.17
C11orf88Q6PI97 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.49□□□□□ -2.17
C11orf88Q6PI97 SNX2P2-201ENST00000424553 323 ntBASIC1.49□□□□□ -2.17
C11orf88Q6PI97 AL606517.2-201ENST00000442855 241 ntBASIC1.49□□□□□ -2.17
C11orf88Q6PI97 RN7SKP210-201ENST00000459176 261 ntBASIC1.49□□□□□ -2.17
C11orf88Q6PI97 RPL31P58-201ENST00000469001 379 ntBASIC1.49□□□□□ -2.17
C11orf88Q6PI97 AC099513.1-201ENST00000490423 301 ntBASIC1.49□□□□□ -2.17
C11orf88Q6PI97 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.49□□□□□ -2.17
C11orf88Q6PI97 RNU6-718P-201ENST00000516166 105 ntBASIC1.49□□□□□ -2.17
C11orf88Q6PI97 Y_RNA.706-201ENST00000516933 99 ntBASIC1.49□□□□□ -2.17
C11orf88Q6PI97 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.49□□□□□ -2.17
C11orf88Q6PI97 AL137100.2-201ENST00000555786 315 ntBASIC1.49□□□□□ -2.17
C11orf88Q6PI97 AC015688.6-201ENST00000577737 104 ntBASIC1.49□□□□□ -2.17
C11orf88Q6PI97 MIR5696-201ENST00000578474 85 ntBASIC1.49□□□□□ -2.17
C11orf88Q6PI97 MIR4255-201ENST00000579351 72 ntBASIC1.49□□□□□ -2.17
C11orf88Q6PI97 MIR3683-201ENST00000580847 82 ntBASIC1.49□□□□□ -2.17
C11orf88Q6PI97 uc_338.5-201ENST00000611839 155 ntBASIC1.49□□□□□ -2.17
C11orf88Q6PI97 AC093783.1-201ENST00000612976 329 ntBASIC1.49□□□□□ -2.17
C11orf88Q6PI97 ZNF299P-201ENST00000406845 1804 ntBASIC1.48□□□□□ -2.17
C11orf88Q6PI97 RNU6-950P-201ENST00000384651 107 ntBASIC1.48□□□□□ -2.17
C11orf88Q6PI97 SNORA67.5-201ENST00000391036 107 ntBASIC1.48□□□□□ -2.17
C11orf88Q6PI97 SNORA40.18-201ENST00000391200 128 ntBASIC1.48□□□□□ -2.17
C11orf88Q6PI97 RNU6-1148P-201ENST00000410992 104 ntBASIC1.48□□□□□ -2.17
C11orf88Q6PI97 AC243428.1-201ENST00000421099 264 ntBASIC1.48□□□□□ -2.17
C11orf88Q6PI97 USMG5P1-201ENST00000425964 177 ntBASIC1.48□□□□□ -2.17
C11orf88Q6PI97 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.48□□□□□ -2.17
C11orf88Q6PI97 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.48□□□□□ -2.17
C11orf88Q6PI97 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.48□□□□□ -2.17
C11orf88Q6PI97 RNU4-49P-201ENST00000516080 140 ntBASIC1.48□□□□□ -2.17
C11orf88Q6PI97 Y_RNA.682-201ENST00000516457 100 ntBASIC1.48□□□□□ -2.17
C11orf88Q6PI97 EIF1P4-201ENST00000572664 335 ntBASIC1.48□□□□□ -2.17
C11orf88Q6PI97 AL355802.3-201ENST00000607571 545 ntBASIC1.48□□□□□ -2.17
C11orf88Q6PI97 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.48□□□□□ -2.17
C11orf88Q6PI97 AC010999.1-201ENST00000611856 324 ntBASIC1.48□□□□□ -2.17
C11orf88Q6PI97 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
C11orf88Q6PI97 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
C11orf88Q6PI97 RNU6-137P-201ENST00000363680 108 ntBASIC1.47□□□□□ -2.17
C11orf88Q6PI97 Y_RNA.184-201ENST00000363884 108 ntBASIC1.47□□□□□ -2.17
C11orf88Q6PI97 SNORD48-201ENST00000364953 64 ntBASIC1.47□□□□□ -2.17
C11orf88Q6PI97 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.47□□□□□ -2.17
C11orf88Q6PI97 SNORD26-201ENST00000384147 75 ntBASIC1.47□□□□□ -2.17
C11orf88Q6PI97 RNA5SP118-201ENST00000410385 109 ntBASIC1.47□□□□□ -2.17
C11orf88Q6PI97 AL603825.1-201ENST00000438481 80 ntBASIC1.47□□□□□ -2.17
C11orf88Q6PI97 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.47□□□□□ -2.17
C11orf88Q6PI97 SNORA25.15-201ENST00000516487 89 ntBASIC1.47□□□□□ -2.17
C11orf88Q6PI97 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.47□□□□□ -2.17
C11orf88Q6PI97 APOOP3-201ENST00000536787 586 ntBASIC1.47□□□□□ -2.17
C11orf88Q6PI97 AK6P2-201ENST00000549020 471 ntBASIC1.47□□□□□ -2.17
C11orf88Q6PI97 FRG2DP-202ENST00000566967 323 ntBASIC1.47□□□□□ -2.17
C11orf88Q6PI97 AP000942.3-201ENST00000603702 160 ntBASIC1.47□□□□□ -2.17
C11orf88Q6PI97 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.47□□□□□ -2.17
C11orf88Q6PI97 RNU6-222P-201ENST00000362438 107 ntBASIC1.46□□□□□ -2.18
C11orf88Q6PI97 RNA5SP99-201ENST00000364020 114 ntBASIC1.46□□□□□ -2.18
C11orf88Q6PI97 Y_RNA.473-201ENST00000384333 102 ntBASIC1.46□□□□□ -2.18
C11orf88Q6PI97 MIR194-1-201ENST00000384892 85 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 358.8 ms