Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 MAPK10-322ENST00000641485 4530 ntBASIC3.31□□□□□ -1.88
CNKSR3Q6P9H4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.31□□□□□ -1.88
CNKSR3Q6P9H4 AL136360.1-201ENST00000503377 1900 ntBASIC3.31□□□□□ -1.88
CNKSR3Q6P9H4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CNKSR3Q6P9H4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CNKSR3Q6P9H4 PWAR6-201ENST00000552334 4618 ntBASIC3.3□□□□□ -1.88
CNKSR3Q6P9H4 AC010329.5-201ENST00000623497 2174 ntBASIC3.3□□□□□ -1.88
CNKSR3Q6P9H4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.3□□□□□ -1.88
CNKSR3Q6P9H4 RNU6-103P-201ENST00000363686 107 ntBASIC3.3□□□□□ -1.88
CNKSR3Q6P9H4 RNU6-80P-201ENST00000384195 107 ntBASIC3.3□□□□□ -1.88
CNKSR3Q6P9H4 RNA5SP390-201ENST00000410191 113 ntBASIC3.3□□□□□ -1.88
CNKSR3Q6P9H4 AC023141.4-201ENST00000412031 328 ntBASIC3.3□□□□□ -1.88
CNKSR3Q6P9H4 AC002075.2-201ENST00000425207 252 ntBASIC3.3□□□□□ -1.88
CNKSR3Q6P9H4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.3□□□□□ -1.88
CNKSR3Q6P9H4 AC103975.1-201ENST00000482506 483 ntBASIC3.3□□□□□ -1.88
CNKSR3Q6P9H4 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.3□□□□□ -1.88
CNKSR3Q6P9H4 AC109810.1-201ENST00000534066 224 ntBASIC3.3□□□□□ -1.88
CNKSR3Q6P9H4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.3□□□□□ -1.88
CNKSR3Q6P9H4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.3□□□□□ -1.88
CNKSR3Q6P9H4 CYP4A27P-201ENST00000567218 190 ntBASIC3.3□□□□□ -1.88
CNKSR3Q6P9H4 MIR3945-201ENST00000581853 98 ntBASIC3.3□□□□□ -1.88
CNKSR3Q6P9H4 AL356575.1-201ENST00000603008 283 ntBASIC3.3□□□□□ -1.88
CNKSR3Q6P9H4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.3□□□□□ -1.88
CNKSR3Q6P9H4 AC006380.1-201ENST00000603598 186 ntBASIC3.3□□□□□ -1.88
CNKSR3Q6P9H4 AC099778.2-201ENST00000610904 211 ntBASIC3.3□□□□□ -1.88
CNKSR3Q6P9H4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CNKSR3Q6P9H4 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.3□□□□□ -1.88
CNKSR3Q6P9H4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.3□□□□□ -1.88
CNKSR3Q6P9H4 AC007496.3-201ENST00000624987 3443 ntBASIC3.3□□□□□ -1.88
CNKSR3Q6P9H4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CNKSR3Q6P9H4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CNKSR3Q6P9H4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CNKSR3Q6P9H4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CNKSR3Q6P9H4 RNU6-1298P-201ENST00000362456 101 ntBASIC3.29□□□□□ -1.88
CNKSR3Q6P9H4 MIR539-201ENST00000365690 78 ntBASIC3.29□□□□□ -1.88
CNKSR3Q6P9H4 SNORA18.3-201ENST00000384122 132 ntBASIC3.29□□□□□ -1.88
CNKSR3Q6P9H4 RNU6-851P-201ENST00000384565 107 ntBASIC3.29□□□□□ -1.88
CNKSR3Q6P9H4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CNKSR3Q6P9H4 AC004866.1-201ENST00000411748 78 ntBASIC3.29□□□□□ -1.88
CNKSR3Q6P9H4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.29□□□□□ -1.88
CNKSR3Q6P9H4 SCGB1D5P-201ENST00000515134 247 ntBASIC3.29□□□□□ -1.88
CNKSR3Q6P9H4 RNU4-57P-201ENST00000515980 135 ntBASIC3.29□□□□□ -1.88
CNKSR3Q6P9H4 RN7SKP132-201ENST00000516001 208 ntBASIC3.29□□□□□ -1.88
CNKSR3Q6P9H4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.29□□□□□ -1.88
CNKSR3Q6P9H4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.29□□□□□ -1.88
CNKSR3Q6P9H4 AL391813.1-201ENST00000603098 260 ntBASIC3.29□□□□□ -1.88
CNKSR3Q6P9H4 AC005520.5-201ENST00000613926 164 ntBASIC3.29□□□□□ -1.88
CNKSR3Q6P9H4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.29□□□□□ -1.88
CNKSR3Q6P9H4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CNKSR3Q6P9H4 AC091564.4-201ENST00000533934 2194 ntBASIC3.28□□□□□ -1.88
CNKSR3Q6P9H4 AC103988.1-201ENST00000566382 2177 ntBASIC3.28□□□□□ -1.88
CNKSR3Q6P9H4 AC062016.1-201ENST00000355719 319 ntBASIC3.28□□□□□ -1.88
CNKSR3Q6P9H4 Y_RNA.24-201ENST00000362508 103 ntBASIC3.28□□□□□ -1.88
CNKSR3Q6P9H4 SNORD115-30-201ENST00000364117 82 ntBASIC3.28□□□□□ -1.88
CNKSR3Q6P9H4 RNU6-1264P-201ENST00000383891 107 ntBASIC3.28□□□□□ -1.88
CNKSR3Q6P9H4 SNORA8.3-201ENST00000384679 139 ntBASIC3.28□□□□□ -1.88
CNKSR3Q6P9H4 RNU6-376P-201ENST00000384731 106 ntBASIC3.28□□□□□ -1.88
CNKSR3Q6P9H4 MIR208B-201ENST00000401172 77 ntBASIC3.28□□□□□ -1.88
CNKSR3Q6P9H4 RNU2-49P-201ENST00000410666 184 ntBASIC3.28□□□□□ -1.88
CNKSR3Q6P9H4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.28□□□□□ -1.88
CNKSR3Q6P9H4 RNU6-659P-201ENST00000516454 104 ntBASIC3.28□□□□□ -1.88
CNKSR3Q6P9H4 AC006199.1-201ENST00000548728 219 ntBASIC3.28□□□□□ -1.88
CNKSR3Q6P9H4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.28□□□□□ -1.88
CNKSR3Q6P9H4 SNORD98-201ENST00000636377 67 ntBASIC3.28□□□□□ -1.88
CNKSR3Q6P9H4 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CNKSR3Q6P9H4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.28□□□□□ -1.88
CNKSR3Q6P9H4 MAPK10-362ENST00000641864 4484 ntBASIC3.28□□□□□ -1.88
CNKSR3Q6P9H4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CNKSR3Q6P9H4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CNKSR3Q6P9H4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.89
CNKSR3Q6P9H4 GABRG2-229ENST00000641017 3628 ntBASIC3.27□□□□□ -1.89
CNKSR3Q6P9H4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CNKSR3Q6P9H4 Y_RNA.293-201ENST00000364908 93 ntBASIC3.27□□□□□ -1.89
CNKSR3Q6P9H4 Y_RNA.337-201ENST00000365312 102 ntBASIC3.27□□□□□ -1.89
CNKSR3Q6P9H4 RNU6-487P-201ENST00000365430 104 ntBASIC3.27□□□□□ -1.89
CNKSR3Q6P9H4 SNORA72.4-201ENST00000384174 132 ntBASIC3.27□□□□□ -1.89
CNKSR3Q6P9H4 AL031003.1-201ENST00000404229 172 ntBASIC3.27□□□□□ -1.89
CNKSR3Q6P9H4 PTGES3P4-201ENST00000426243 356 ntBASIC3.27□□□□□ -1.89
CNKSR3Q6P9H4 RPL23AP58-201ENST00000440453 469 ntBASIC3.27□□□□□ -1.89
CNKSR3Q6P9H4 AC092991.1-201ENST00000477176 376 ntBASIC3.27□□□□□ -1.89
CNKSR3Q6P9H4 RPL31P41-201ENST00000477967 372 ntBASIC3.27□□□□□ -1.89
CNKSR3Q6P9H4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.27□□□□□ -1.89
CNKSR3Q6P9H4 ACA59.2-201ENST00000517061 156 ntBASIC3.27□□□□□ -1.89
CNKSR3Q6P9H4 AC107016.2-201ENST00000547968 190 ntBASIC3.27□□□□□ -1.89
CNKSR3Q6P9H4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CNKSR3Q6P9H4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CNKSR3Q6P9H4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.27□□□□□ -1.89
CNKSR3Q6P9H4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CNKSR3Q6P9H4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.27□□□□□ -1.89
CNKSR3Q6P9H4 AC096644.4-201ENST00000563417 2912 ntBASIC3.26□□□□□ -1.89
CNKSR3Q6P9H4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.26□□□□□ -1.89
CNKSR3Q6P9H4 RNU6-834P-201ENST00000362367 110 ntBASIC3.26□□□□□ -1.89
CNKSR3Q6P9H4 SNORA63.4-201ENST00000362763 126 ntBASIC3.26□□□□□ -1.89
CNKSR3Q6P9H4 RNU6-199P-201ENST00000362954 107 ntBASIC3.26□□□□□ -1.89
CNKSR3Q6P9H4 RNY1P11-201ENST00000363759 113 ntBASIC3.26□□□□□ -1.89
CNKSR3Q6P9H4 SNORD87-201ENST00000364849 89 ntBASIC3.26□□□□□ -1.89
CNKSR3Q6P9H4 Y_RNA.287-201ENST00000364853 94 ntBASIC3.26□□□□□ -1.89
CNKSR3Q6P9H4 RNU6-429P-201ENST00000384582 108 ntBASIC3.26□□□□□ -1.89
CNKSR3Q6P9H4 RNU6-460P-201ENST00000391158 108 ntBASIC3.26□□□□□ -1.89
CNKSR3Q6P9H4 CBX3P9-201ENST00000402326 552 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms