Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 MIR483-201ENST00000385070 76 ntBASIC2.47□□□□□ -2.01
RNF220Q5VTB9 RNU11-3P-201ENST00000391111 133 ntBASIC2.47□□□□□ -2.01
RNF220Q5VTB9 DPH3P2-201ENST00000422618 250 ntBASIC2.47□□□□□ -2.01
RNF220Q5VTB9 RNU6-327P-201ENST00000516270 127 ntBASIC2.47□□□□□ -2.01
RNF220Q5VTB9 RNU6-897P-201ENST00000517135 105 ntBASIC2.47□□□□□ -2.01
RNF220Q5VTB9 SNORA31.25-201ENST00000517242 134 ntBASIC2.47□□□□□ -2.01
RNF220Q5VTB9 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.47□□□□□ -2.01
RNF220Q5VTB9 AC009127.3-201ENST00000570531 403 ntBASIC2.47□□□□□ -2.01
RNF220Q5VTB9 MIR3169-201ENST00000578032 83 ntBASIC2.47□□□□□ -2.01
RNF220Q5VTB9 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.47□□□□□ -2.01
RNF220Q5VTB9 AC245060.5-201ENST00000610778 3293 ntBASIC2.47□□□□□ -2.01
RNF220Q5VTB9 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
RNF220Q5VTB9 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
RNF220Q5VTB9 Y_RNA.210-201ENST00000364161 110 ntBASIC2.46□□□□□ -2.02
RNF220Q5VTB9 Y_RNA.276-201ENST00000364732 109 ntBASIC2.46□□□□□ -2.02
RNF220Q5VTB9 SNORD63-201ENST00000384262 68 ntBASIC2.46□□□□□ -2.02
RNF220Q5VTB9 MIR9-1-201ENST00000385198 89 ntBASIC2.46□□□□□ -2.02
RNF220Q5VTB9 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.46□□□□□ -2.02
RNF220Q5VTB9 AL390729.2-201ENST00000416137 156 ntBASIC2.46□□□□□ -2.02
RNF220Q5VTB9 AC060773.1-201ENST00000421698 310 ntBASIC2.46□□□□□ -2.02
RNF220Q5VTB9 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.46□□□□□ -2.02
RNF220Q5VTB9 AL353689.1-201ENST00000438895 199 ntBASIC2.46□□□□□ -2.02
RNF220Q5VTB9 AL118496.2-201ENST00000448300 230 ntBASIC2.46□□□□□ -2.02
RNF220Q5VTB9 RN7SL636P-201ENST00000497504 294 ntBASIC2.46□□□□□ -2.02
RNF220Q5VTB9 RNU6-1146P-201ENST00000516282 102 ntBASIC2.46□□□□□ -2.02
RNF220Q5VTB9 SNORA40.15-201ENST00000516884 107 ntBASIC2.46□□□□□ -2.02
RNF220Q5VTB9 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.46□□□□□ -2.02
RNF220Q5VTB9 IGLV3-17-201ENST00000519099 244 ntBASIC2.46□□□□□ -2.02
RNF220Q5VTB9 MIR4635-201ENST00000583759 79 ntBASIC2.46□□□□□ -2.02
RNF220Q5VTB9 AC116312.1-201ENST00000606841 314 ntBASIC2.46□□□□□ -2.02
RNF220Q5VTB9 AC006001.4-201ENST00000622243 395 ntBASIC2.46□□□□□ -2.02
RNF220Q5VTB9 AC091932.3-201ENST00000624223 323 ntBASIC2.46□□□□□ -2.02
RNF220Q5VTB9 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
RNF220Q5VTB9 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.46□□□□□ -2.02
RNF220Q5VTB9 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
RNF220Q5VTB9 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
RNF220Q5VTB9 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
RNF220Q5VTB9 ZNF720P1-201ENST00000562403 1939 ntBASIC2.45□□□□□ -2.02
RNF220Q5VTB9 RNU6-454P-201ENST00000364292 107 ntBASIC2.45□□□□□ -2.02
RNF220Q5VTB9 RNA5SP465-201ENST00000391195 109 ntBASIC2.45□□□□□ -2.02
RNF220Q5VTB9 MTND5P22-201ENST00000458380 195 ntBASIC2.45□□□□□ -2.02
RNF220Q5VTB9 HMGB3P3-201ENST00000510526 400 ntBASIC2.45□□□□□ -2.02
RNF220Q5VTB9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.45□□□□□ -2.02
RNF220Q5VTB9 AC055872.1-201ENST00000570978 278 ntBASIC2.45□□□□□ -2.02
RNF220Q5VTB9 MIR4529-201ENST00000578110 78 ntBASIC2.45□□□□□ -2.02
RNF220Q5VTB9 MIR4423-201ENST00000580922 80 ntBASIC2.45□□□□□ -2.02
RNF220Q5VTB9 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.45□□□□□ -2.02
RNF220Q5VTB9 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.45□□□□□ -2.02
RNF220Q5VTB9 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
RNF220Q5VTB9 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.44□□□□□ -2.02
RNF220Q5VTB9 RNU1-112P-201ENST00000364401 164 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 RNU6-1175P-201ENST00000365200 107 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 RNU6-937P-201ENST00000384325 106 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 Y_RNA.570-201ENST00000384750 101 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 MIR144-201ENST00000384886 86 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 SNORD23.1-201ENST00000408212 104 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 MIR1253-201ENST00000408273 105 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 MIR1283-2-201ENST00000408621 87 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 MTND2P23-201ENST00000422990 651 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 ATP5J2P3-201ENST00000451550 258 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.44□□□□□ -2.02
RNF220Q5VTB9 AC010655.3-201ENST00000478818 450 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 MRPS35P2-201ENST00000508242 191 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 AC011406.1-201ENST00000512440 370 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 RNU6-1143P-201ENST00000516125 104 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 RNU6-1045P-201ENST00000516321 107 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 RNU6-1046P-201ENST00000516538 107 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 SUMO2P18-201ENST00000518873 252 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 AP005660.1-201ENST00000522972 293 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 AC079600.2-201ENST00000550076 130 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 AC121758.2-201ENST00000553271 193 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 AC005786.1-201ENST00000588553 154 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 AC006380.1-201ENST00000603598 186 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 AC011373.1-201ENST00000607270 237 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 U2.15-201ENST00000611544 191 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 U2.16-201ENST00000613119 191 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 U2.12-201ENST00000613778 191 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 U2.20-201ENST00000613956 192 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 U2.9-201ENST00000615427 191 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 U2.11-201ENST00000616345 191 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 U2.2-201ENST00000616535 191 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 U2.3-201ENST00000617785 191 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 U2.19-201ENST00000618602 191 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 RNU2-1-201ENST00000618664 191 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 U2.6-201ENST00000619225 191 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 U2.5-201ENST00000619465 191 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 U2.10-201ENST00000620268 191 ntBASIC2.44□□□□□ -2.02
RNF220Q5VTB9 AC080100.1-201ENST00000624239 5356 ntBASIC2.43□□□□□ -2.02
RNF220Q5VTB9 Y_RNA.101-201ENST00000363154 102 ntBASIC2.43□□□□□ -2.02
RNF220Q5VTB9 RNU6-770P-201ENST00000363929 105 ntBASIC2.43□□□□□ -2.02
RNF220Q5VTB9 Y_RNA.214-201ENST00000364201 112 ntBASIC2.43□□□□□ -2.02
RNF220Q5VTB9 RNU2-54P-201ENST00000410299 190 ntBASIC2.43□□□□□ -2.02
RNF220Q5VTB9 RNU2-20P-201ENST00000410425 191 ntBASIC2.43□□□□□ -2.02
RNF220Q5VTB9 RPL23AP36-201ENST00000413895 458 ntBASIC2.43□□□□□ -2.02
RNF220Q5VTB9 AC016909.1-201ENST00000415916 166 ntBASIC2.43□□□□□ -2.02
RNF220Q5VTB9 HMGN2P3-201ENST00000433603 273 ntBASIC2.43□□□□□ -2.02
RNF220Q5VTB9 HMGN2P5-201ENST00000436882 273 ntBASIC2.43□□□□□ -2.02
RNF220Q5VTB9 AL049873.1-201ENST00000480540 376 ntBASIC2.43□□□□□ -2.02
RNF220Q5VTB9 AC010598.1-201ENST00000510378 103 ntBASIC2.43□□□□□ -2.02
RNF220Q5VTB9 RNU6-1041P-201ENST00000516254 102 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms