Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RUNDC3AQ59EK9 RNU4-50P-201ENST00000364361 141 ntBASIC2.23□□□□□ -2.05
RUNDC3AQ59EK9 SNORD114-30-201ENST00000364448 72 ntBASIC2.23□□□□□ -2.05
RUNDC3AQ59EK9 RNU6-1264P-201ENST00000383891 107 ntBASIC2.23□□□□□ -2.05
RUNDC3AQ59EK9 Y_RNA.389-201ENST00000383924 113 ntBASIC2.23□□□□□ -2.05
RUNDC3AQ59EK9 MIR518A2-201ENST00000384966 87 ntBASIC2.23□□□□□ -2.05
RUNDC3AQ59EK9 MIR29C-201ENST00000385231 88 ntBASIC2.23□□□□□ -2.05
RUNDC3AQ59EK9 RNU6-57P-201ENST00000411348 103 ntBASIC2.23□□□□□ -2.05
RUNDC3AQ59EK9 BX510359.4-201ENST00000423750 193 ntBASIC2.23□□□□□ -2.05
RUNDC3AQ59EK9 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.23□□□□□ -2.05
RUNDC3AQ59EK9 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.23□□□□□ -2.05
RUNDC3AQ59EK9 AC026436.1-201ENST00000510537 270 ntBASIC2.23□□□□□ -2.05
RUNDC3AQ59EK9 RNU6-948P-201ENST00000516374 107 ntBASIC2.23□□□□□ -2.05
RUNDC3AQ59EK9 RNU2-34P-201ENST00000516534 121 ntBASIC2.23□□□□□ -2.05
RUNDC3AQ59EK9 RNU6-856P-201ENST00000516959 98 ntBASIC2.23□□□□□ -2.05
RUNDC3AQ59EK9 Y_RNA.715-201ENST00000517082 110 ntBASIC2.23□□□□□ -2.05
RUNDC3AQ59EK9 SNORA31.25-201ENST00000517242 134 ntBASIC2.23□□□□□ -2.05
RUNDC3AQ59EK9 AL353621.2-201ENST00000605340 133 ntBASIC2.23□□□□□ -2.05
RUNDC3AQ59EK9 AL121655.1-201ENST00000605811 308 ntBASIC2.23□□□□□ -2.05
RUNDC3AQ59EK9 AL021879.1-201ENST00000611756 288 ntBASIC2.23□□□□□ -2.05
RUNDC3AQ59EK9 AC010205.1-201ENST00000616668 449 ntBASIC2.23□□□□□ -2.05
RUNDC3AQ59EK9 MIR6852-201ENST00000621699 66 ntBASIC2.23□□□□□ -2.05
RUNDC3AQ59EK9 snoZ196.1-201ENST00000625269 89 ntBASIC2.23□□□□□ -2.05
RUNDC3AQ59EK9 MIR1291-201ENST00000627649 87 ntBASIC2.23□□□□□ -2.05
RUNDC3AQ59EK9 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RUNDC3AQ59EK9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
RUNDC3AQ59EK9 AC005336.3-201ENST00000623833 2679 ntBASIC2.23□□□□□ -2.05
RUNDC3AQ59EK9 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RUNDC3AQ59EK9 Y_RNA.111-201ENST00000363248 100 ntBASIC2.22□□□□□ -2.05
RUNDC3AQ59EK9 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
RUNDC3AQ59EK9 Y_RNA.455-201ENST00000384230 98 ntBASIC2.22□□□□□ -2.05
RUNDC3AQ59EK9 Y_RNA.471-201ENST00000384312 102 ntBASIC2.22□□□□□ -2.05
RUNDC3AQ59EK9 Y_RNA.498-201ENST00000384460 102 ntBASIC2.22□□□□□ -2.05
RUNDC3AQ59EK9 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RUNDC3AQ59EK9 AL079342.1-201ENST00000401460 267 ntBASIC2.22□□□□□ -2.05
RUNDC3AQ59EK9 AL590004.1-201ENST00000405321 300 ntBASIC2.22□□□□□ -2.05
RUNDC3AQ59EK9 MIR1283-2-201ENST00000408621 87 ntBASIC2.22□□□□□ -2.05
RUNDC3AQ59EK9 MIR1185-2-201ENST00000408687 86 ntBASIC2.22□□□□□ -2.05
RUNDC3AQ59EK9 RNU6-101P-201ENST00000410323 104 ntBASIC2.22□□□□□ -2.05
RUNDC3AQ59EK9 RNA5SP184-201ENST00000411071 108 ntBASIC2.22□□□□□ -2.05
RUNDC3AQ59EK9 RNU6-130P-201ENST00000411112 103 ntBASIC2.22□□□□□ -2.05
RUNDC3AQ59EK9 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.22□□□□□ -2.05
RUNDC3AQ59EK9 AC113618.1-201ENST00000416747 285 ntBASIC2.22□□□□□ -2.05
RUNDC3AQ59EK9 AC063976.3-201ENST00000426849 329 ntBASIC2.22□□□□□ -2.05
RUNDC3AQ59EK9 TOMM22P2-201ENST00000430735 237 ntBASIC2.22□□□□□ -2.05
RUNDC3AQ59EK9 AC074290.1-201ENST00000448883 135 ntBASIC2.22□□□□□ -2.05
RUNDC3AQ59EK9 RNU1-131P-201ENST00000458943 161 ntBASIC2.22□□□□□ -2.05
RUNDC3AQ59EK9 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.22□□□□□ -2.05
RUNDC3AQ59EK9 Y_RNA.721-201ENST00000517207 102 ntBASIC2.22□□□□□ -2.05
RUNDC3AQ59EK9 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.22□□□□□ -2.05
RUNDC3AQ59EK9 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.22□□□□□ -2.05
RUNDC3AQ59EK9 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.22□□□□□ -2.05
RUNDC3AQ59EK9 AC055872.1-201ENST00000570978 278 ntBASIC2.22□□□□□ -2.05
RUNDC3AQ59EK9 MIR3169-201ENST00000578032 83 ntBASIC2.22□□□□□ -2.05
RUNDC3AQ59EK9 AC113195.1-201ENST00000579952 141 ntBASIC2.22□□□□□ -2.05
RUNDC3AQ59EK9 AC013412.1-201ENST00000610687 192 ntBASIC2.22□□□□□ -2.05
RUNDC3AQ59EK9 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.22□□□□□ -2.05
RUNDC3AQ59EK9 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RUNDC3AQ59EK9 ZNF720P1-201ENST00000562403 1939 ntBASIC2.21□□□□□ -2.06
RUNDC3AQ59EK9 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
RUNDC3AQ59EK9 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RUNDC3AQ59EK9 MIR410-201ENST00000362222 80 ntBASIC2.21□□□□□ -2.06
RUNDC3AQ59EK9 RNA5SP493-201ENST00000364115 91 ntBASIC2.21□□□□□ -2.06
RUNDC3AQ59EK9 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RUNDC3AQ59EK9 AC016909.1-201ENST00000415916 166 ntBASIC2.21□□□□□ -2.06
RUNDC3AQ59EK9 AL109933.2-201ENST00000452651 260 ntBASIC2.21□□□□□ -2.06
RUNDC3AQ59EK9 RNU6-221P-201ENST00000459541 99 ntBASIC2.21□□□□□ -2.06
RUNDC3AQ59EK9 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.21□□□□□ -2.06
RUNDC3AQ59EK9 SCARNA15.1-201ENST00000516384 125 ntBASIC2.21□□□□□ -2.06
RUNDC3AQ59EK9 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.21□□□□□ -2.06
RUNDC3AQ59EK9 SNORD53-201ENST00000579969 78 ntBASIC2.21□□□□□ -2.06
RUNDC3AQ59EK9 AC130454.1-201ENST00000622948 401 ntBASIC2.21□□□□□ -2.06
RUNDC3AQ59EK9 AL136360.1-201ENST00000503377 1900 ntBASIC2.21□□□□□ -2.06
RUNDC3AQ59EK9 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.2□□□□□ -2.06
RUNDC3AQ59EK9 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.2□□□□□ -2.06
RUNDC3AQ59EK9 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.2□□□□□ -2.06
RUNDC3AQ59EK9 AC009487.4-201ENST00000624969 3585 ntBASIC2.2□□□□□ -2.06
RUNDC3AQ59EK9 AC062016.1-201ENST00000355719 319 ntBASIC2.2□□□□□ -2.06
RUNDC3AQ59EK9 RNU1-58P-201ENST00000362413 163 ntBASIC2.2□□□□□ -2.06
RUNDC3AQ59EK9 RNU6-301P-201ENST00000384277 107 ntBASIC2.2□□□□□ -2.06
RUNDC3AQ59EK9 Y_RNA.551-201ENST00000384661 102 ntBASIC2.2□□□□□ -2.06
RUNDC3AQ59EK9 MIR1252-201ENST00000408861 65 ntBASIC2.2□□□□□ -2.06
RUNDC3AQ59EK9 RNU6-985P-201ENST00000410182 104 ntBASIC2.2□□□□□ -2.06
RUNDC3AQ59EK9 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.2□□□□□ -2.06
RUNDC3AQ59EK9 AC104435.1-201ENST00000483483 166 ntBASIC2.2□□□□□ -2.06
RUNDC3AQ59EK9 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.2□□□□□ -2.06
RUNDC3AQ59EK9 AC009127.3-201ENST00000570531 403 ntBASIC2.2□□□□□ -2.06
RUNDC3AQ59EK9 RAC1P9-201ENST00000604990 392 ntBASIC2.2□□□□□ -2.06
RUNDC3AQ59EK9 MIR6840-201ENST00000611937 71 ntBASIC2.2□□□□□ -2.06
RUNDC3AQ59EK9 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.2□□□□□ -2.06
RUNDC3AQ59EK9 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.2□□□□□ -2.06
RUNDC3AQ59EK9 MIR3674-201ENST00000636576 68 ntBASIC2.2□□□□□ -2.06
RUNDC3AQ59EK9 ZNF658B-202ENST00000615961 3375 ntBASIC2.2□□□□□ -2.06
RUNDC3AQ59EK9 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
RUNDC3AQ59EK9 MIRLET7G-201ENST00000362280 84 ntBASIC2.19□□□□□ -2.06
RUNDC3AQ59EK9 RNU6-23P-201ENST00000363283 107 ntBASIC2.19□□□□□ -2.06
RUNDC3AQ59EK9 Y_RNA.153-201ENST00000363615 91 ntBASIC2.19□□□□□ -2.06
RUNDC3AQ59EK9 RNU6-454P-201ENST00000364292 107 ntBASIC2.19□□□□□ -2.06
RUNDC3AQ59EK9 SNORA63C-201ENST00000364578 129 ntBASIC2.19□□□□□ -2.06
RUNDC3AQ59EK9 Y_RNA.422-201ENST00000384054 114 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms