Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC080078.3-201ENST00000605407 463 ntBASIC1.61□□□□□ -2.15
SHROOM1Q2M3G4 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.61□□□□□ -2.15
SHROOM1Q2M3G4 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.61□□□□□ -2.15
SHROOM1Q2M3G4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.61□□□□□ -2.15
SHROOM1Q2M3G4 MTND5P10-201ENST00000603719 1809 ntBASIC1.61□□□□□ -2.15
SHROOM1Q2M3G4 RNU6-727P-201ENST00000363592 107 ntBASIC1.6□□□□□ -2.15
SHROOM1Q2M3G4 Y_RNA.269-201ENST00000364685 89 ntBASIC1.6□□□□□ -2.15
SHROOM1Q2M3G4 RNU4-9P-201ENST00000364951 139 ntBASIC1.6□□□□□ -2.15
SHROOM1Q2M3G4 RNU6-439P-201ENST00000384188 106 ntBASIC1.6□□□□□ -2.15
SHROOM1Q2M3G4 RNU6-842P-201ENST00000384269 107 ntBASIC1.6□□□□□ -2.15
SHROOM1Q2M3G4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
SHROOM1Q2M3G4 AL356776.1-201ENST00000406574 447 ntBASIC1.6□□□□□ -2.15
SHROOM1Q2M3G4 RPS26P42-201ENST00000413485 326 ntBASIC1.6□□□□□ -2.15
SHROOM1Q2M3G4 AC060773.1-201ENST00000421698 310 ntBASIC1.6□□□□□ -2.15
SHROOM1Q2M3G4 MTCO3P29-201ENST00000432119 779 ntBASIC1.6□□□□□ -2.15
SHROOM1Q2M3G4 AC099677.2-201ENST00000436385 175 ntBASIC1.6□□□□□ -2.15
SHROOM1Q2M3G4 SNRPGP13-201ENST00000442212 177 ntBASIC1.6□□□□□ -2.15
SHROOM1Q2M3G4 RNU1-131P-201ENST00000458943 161 ntBASIC1.6□□□□□ -2.15
SHROOM1Q2M3G4 snoU13.30-201ENST00000458951 104 ntBASIC1.6□□□□□ -2.15
SHROOM1Q2M3G4 AC007215.1-201ENST00000464893 276 ntBASIC1.6□□□□□ -2.15
SHROOM1Q2M3G4 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.6□□□□□ -2.15
SHROOM1Q2M3G4 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.6□□□□□ -2.15
SHROOM1Q2M3G4 SNRPGP20-201ENST00000604477 205 ntBASIC1.6□□□□□ -2.15
SHROOM1Q2M3G4 RPL17P51-201ENST00000605218 238 ntBASIC1.6□□□□□ -2.15
SHROOM1Q2M3G4 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.6□□□□□ -2.15
SHROOM1Q2M3G4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.6□□□□□ -2.15
SHROOM1Q2M3G4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
SHROOM1Q2M3G4 U8.1-201ENST00000362843 134 ntBASIC1.59□□□□□ -2.15
SHROOM1Q2M3G4 Y_RNA.116-201ENST00000363292 103 ntBASIC1.59□□□□□ -2.15
SHROOM1Q2M3G4 RNU6-541P-201ENST00000384709 110 ntBASIC1.59□□□□□ -2.15
SHROOM1Q2M3G4 MIR548F5-201ENST00000408421 86 ntBASIC1.59□□□□□ -2.15
SHROOM1Q2M3G4 AC009237.7-201ENST00000447357 229 ntBASIC1.59□□□□□ -2.15
SHROOM1Q2M3G4 MTND1P17-201ENST00000448961 204 ntBASIC1.59□□□□□ -2.15
SHROOM1Q2M3G4 ATP5J2P3-201ENST00000451550 258 ntBASIC1.59□□□□□ -2.15
SHROOM1Q2M3G4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.59□□□□□ -2.15
SHROOM1Q2M3G4 RNU1-123P-201ENST00000458950 160 ntBASIC1.59□□□□□ -2.15
SHROOM1Q2M3G4 MTND5P5-201ENST00000503764 376 ntBASIC1.59□□□□□ -2.15
SHROOM1Q2M3G4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.59□□□□□ -2.15
SHROOM1Q2M3G4 SNORA25.14-201ENST00000516481 132 ntBASIC1.59□□□□□ -2.15
SHROOM1Q2M3G4 RNU6-358P-201ENST00000516564 75 ntBASIC1.59□□□□□ -2.15
SHROOM1Q2M3G4 RNA5SP384-201ENST00000516615 116 ntBASIC1.59□□□□□ -2.15
SHROOM1Q2M3G4 RNA5SP102-201ENST00000516865 106 ntBASIC1.59□□□□□ -2.15
SHROOM1Q2M3G4 SNORA31.17-201ENST00000516953 127 ntBASIC1.59□□□□□ -2.15
SHROOM1Q2M3G4 RNU6-58P-201ENST00000517143 103 ntBASIC1.59□□□□□ -2.15
SHROOM1Q2M3G4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.59□□□□□ -2.15
SHROOM1Q2M3G4 AC026470.2-201ENST00000561492 181 ntBASIC1.59□□□□□ -2.15
SHROOM1Q2M3G4 AC006001.4-201ENST00000622243 395 ntBASIC1.59□□□□□ -2.15
SHROOM1Q2M3G4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
SHROOM1Q2M3G4 CASC19-280ENST00000642102 1351 ntBASIC1.59□□□□□ -2.16
SHROOM1Q2M3G4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.58□□□□□ -2.16
SHROOM1Q2M3G4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.58□□□□□ -2.16
SHROOM1Q2M3G4 RNU6-414P-201ENST00000363705 104 ntBASIC1.58□□□□□ -2.16
SHROOM1Q2M3G4 SNORD87-201ENST00000364849 89 ntBASIC1.58□□□□□ -2.16
SHROOM1Q2M3G4 Y_RNA.319-201ENST00000365138 92 ntBASIC1.58□□□□□ -2.16
SHROOM1Q2M3G4 Y_RNA.405-201ENST00000383979 100 ntBASIC1.58□□□□□ -2.16
SHROOM1Q2M3G4 Y_RNA.451-201ENST00000384200 100 ntBASIC1.58□□□□□ -2.16
SHROOM1Q2M3G4 Y_RNA.524-201ENST00000384564 100 ntBASIC1.58□□□□□ -2.16
SHROOM1Q2M3G4 Y_RNA.561-201ENST00000384694 100 ntBASIC1.58□□□□□ -2.16
SHROOM1Q2M3G4 MIR300-201ENST00000401138 83 ntBASIC1.58□□□□□ -2.16
SHROOM1Q2M3G4 RNU6-57P-201ENST00000411348 103 ntBASIC1.58□□□□□ -2.16
SHROOM1Q2M3G4 EBAG9P1-201ENST00000418955 543 ntBASIC1.58□□□□□ -2.16
SHROOM1Q2M3G4 MTCO3P46-201ENST00000425787 232 ntBASIC1.58□□□□□ -2.16
SHROOM1Q2M3G4 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.58□□□□□ -2.16
SHROOM1Q2M3G4 RPS3AP52-201ENST00000435639 297 ntBASIC1.58□□□□□ -2.16
SHROOM1Q2M3G4 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.58□□□□□ -2.16
SHROOM1Q2M3G4 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.58□□□□□ -2.16
SHROOM1Q2M3G4 HMGN2P9-201ENST00000476875 229 ntBASIC1.58□□□□□ -2.16
SHROOM1Q2M3G4 AC023790.1-201ENST00000482174 347 ntBASIC1.58□□□□□ -2.16
SHROOM1Q2M3G4 HMGN1P13-201ENST00000505795 138 ntBASIC1.58□□□□□ -2.16
SHROOM1Q2M3G4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.58□□□□□ -2.16
SHROOM1Q2M3G4 Y_RNA.675-201ENST00000516389 149 ntBASIC1.58□□□□□ -2.16
SHROOM1Q2M3G4 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.58□□□□□ -2.16
SHROOM1Q2M3G4 CBX3P8-201ENST00000532412 525 ntBASIC1.58□□□□□ -2.16
SHROOM1Q2M3G4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.58□□□□□ -2.16
SHROOM1Q2M3G4 AC011712.1-201ENST00000588959 234 ntBASIC1.58□□□□□ -2.16
SHROOM1Q2M3G4 AC060780.3-201ENST00000589464 80 ntBASIC1.58□□□□□ -2.16
SHROOM1Q2M3G4 AC126177.8-201ENST00000618339 1015 ntBASIC1.58□□□□□ -2.16
SHROOM1Q2M3G4 MTND4P5-201ENST00000435821 1374 ntBASIC1.58□□□□□ -2.16
SHROOM1Q2M3G4 BX322639.1-202ENST00000423987 2213 ntBASIC1.58□□□□□ -2.16
SHROOM1Q2M3G4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.57□□□□□ -2.16
SHROOM1Q2M3G4 RNU6-873P-201ENST00000363833 107 ntBASIC1.57□□□□□ -2.16
SHROOM1Q2M3G4 RNU6-510P-201ENST00000391239 108 ntBASIC1.57□□□□□ -2.16
SHROOM1Q2M3G4 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.57□□□□□ -2.16
SHROOM1Q2M3G4 MTND3P8-201ENST00000412909 339 ntBASIC1.57□□□□□ -2.16
SHROOM1Q2M3G4 AL139396.1-201ENST00000421137 167 ntBASIC1.57□□□□□ -2.16
SHROOM1Q2M3G4 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.57□□□□□ -2.16
SHROOM1Q2M3G4 AC082651.2-201ENST00000496833 166 ntBASIC1.57□□□□□ -2.16
SHROOM1Q2M3G4 AC027288.2-201ENST00000553028 243 ntBASIC1.57□□□□□ -2.16
SHROOM1Q2M3G4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.57□□□□□ -2.16
SHROOM1Q2M3G4 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.57□□□□□ -2.16
SHROOM1Q2M3G4 SUB1P4-201ENST00000566062 339 ntBASIC1.57□□□□□ -2.16
SHROOM1Q2M3G4 MIR5696-201ENST00000578474 85 ntBASIC1.57□□□□□ -2.16
SHROOM1Q2M3G4 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.57□□□□□ -2.16
SHROOM1Q2M3G4 PRR13P7-201ENST00000605538 430 ntBASIC1.57□□□□□ -2.16
SHROOM1Q2M3G4 U6atac.1-201ENST00000616025 117 ntBASIC1.57□□□□□ -2.16
SHROOM1Q2M3G4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.57□□□□□ -2.16
SHROOM1Q2M3G4 AC091895.1-201ENST00000624494 256 ntBASIC1.57□□□□□ -2.16
SHROOM1Q2M3G4 MTND5P35-201ENST00000557537 1720 ntBASIC1.57□□□□□ -2.16
SHROOM1Q2M3G4 Y_RNA.2-201ENST00000362330 96 ntBASIC1.56□□□□□ -2.16
SHROOM1Q2M3G4 Y_RNA.160-201ENST00000363677 92 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 153.3 ms