Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 MIR98-201ENST00000606724 119 ntBASIC0.13□□□□□ -2.39
HIST3H3Q16695 SCARNA4-201ENST00000629045 128 ntBASIC0.13□□□□□ -2.39
HIST3H3Q16695 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
HIST3H3Q16695 Y_RNA.122-201ENST00000363331 96 ntBASIC0.12□□□□□ -2.39
HIST3H3Q16695 SNORD114-23-201ENST00000363536 72 ntBASIC0.12□□□□□ -2.39
HIST3H3Q16695 Y_RNA.355-201ENST00000365462 98 ntBASIC0.12□□□□□ -2.39
HIST3H3Q16695 MIR598-201ENST00000384868 97 ntBASIC0.12□□□□□ -2.39
HIST3H3Q16695 MIR1-2-201ENST00000384961 85 ntBASIC0.12□□□□□ -2.39
HIST3H3Q16695 MIR216A-201ENST00000385063 110 ntBASIC0.12□□□□□ -2.39
HIST3H3Q16695 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
HIST3H3Q16695 AL355143.1-201ENST00000407101 841 ntBASIC0.12□□□□□ -2.39
HIST3H3Q16695 MTCYBP10-201ENST00000424905 650 ntBASIC0.12□□□□□ -2.39
HIST3H3Q16695 NDUFA5P4-201ENST00000436704 385 ntBASIC0.12□□□□□ -2.39
HIST3H3Q16695 AC093019.1-201ENST00000443135 252 ntBASIC0.12□□□□□ -2.39
HIST3H3Q16695 MTATP6P14-201ENST00000455189 673 ntBASIC0.12□□□□□ -2.39
HIST3H3Q16695 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.12□□□□□ -2.39
HIST3H3Q16695 RNU6-344P-201ENST00000516635 111 ntBASIC0.12□□□□□ -2.39
HIST3H3Q16695 RNU2-56P-201ENST00000516826 190 ntBASIC0.12□□□□□ -2.39
HIST3H3Q16695 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.12□□□□□ -2.39
HIST3H3Q16695 MTND4P33-201ENST00000556706 766 ntBASIC0.12□□□□□ -2.39
HIST3H3Q16695 RMST_3.1-201ENST00000611651 109 ntBASIC0.12□□□□□ -2.39
HIST3H3Q16695 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
HIST3H3Q16695 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.12□□□□□ -2.39
HIST3H3Q16695 AC139792.3-201ENST00000623525 224 ntBASIC0.12□□□□□ -2.39
HIST3H3Q16695 AC007671.2-201ENST00000637344 619 ntBASIC0.12□□□□□ -2.39
HIST3H3Q16695 ZNF204P-201ENST00000416749 2397 ntBASIC0.12□□□□□ -2.39
HIST3H3Q16695 RNU6-1097P-201ENST00000363586 107 ntBASIC0.11□□□□□ -2.39
HIST3H3Q16695 RNY4P34-201ENST00000364779 95 ntBASIC0.11□□□□□ -2.39
HIST3H3Q16695 RNU6-1327P-201ENST00000365302 105 ntBASIC0.11□□□□□ -2.39
HIST3H3Q16695 RNU6-1286P-201ENST00000383871 107 ntBASIC0.11□□□□□ -2.39
HIST3H3Q16695 RNU6-342P-201ENST00000384521 104 ntBASIC0.11□□□□□ -2.39
HIST3H3Q16695 SNORD73A-201ENST00000386062 65 ntBASIC0.11□□□□□ -2.39
HIST3H3Q16695 RNU2-70P-201ENST00000410718 179 ntBASIC0.11□□□□□ -2.39
HIST3H3Q16695 MTCO2P34-201ENST00000421994 607 ntBASIC0.11□□□□□ -2.39
HIST3H3Q16695 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.11□□□□□ -2.39
HIST3H3Q16695 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.11□□□□□ -2.39
HIST3H3Q16695 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.11□□□□□ -2.39
HIST3H3Q16695 USP9YP29-201ENST00000445112 563 ntBASIC0.11□□□□□ -2.39
HIST3H3Q16695 AC092989.1-201ENST00000481235 277 ntBASIC0.11□□□□□ -2.39
HIST3H3Q16695 AC010469.2-201ENST00000496412 480 ntBASIC0.11□□□□□ -2.39
HIST3H3Q16695 RNU6-58P-201ENST00000517143 103 ntBASIC0.11□□□□□ -2.39
HIST3H3Q16695 MTND2P32-201ENST00000521584 1038 ntBASIC0.11□□□□□ -2.39
HIST3H3Q16695 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.11□□□□□ -2.39
HIST3H3Q16695 MTCO3P23-201ENST00000561363 289 ntBASIC0.11□□□□□ -2.39
HIST3H3Q16695 FRG2DP-202ENST00000566967 323 ntBASIC0.11□□□□□ -2.39
HIST3H3Q16695 MIR4438-201ENST00000585271 93 ntBASIC0.11□□□□□ -2.39
HIST3H3Q16695 Z84480.1-201ENST00000605131 311 ntBASIC0.11□□□□□ -2.39
HIST3H3Q16695 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.11□□□□□ -2.39
HIST3H3Q16695 AC122133.1-201ENST00000613964 233 ntBASIC0.11□□□□□ -2.39
HIST3H3Q16695 uc_338.11-201ENST00000619132 160 ntBASIC0.11□□□□□ -2.39
HIST3H3Q16695 MIR924-201ENST00000638017 53 ntBASIC0.11□□□□□ -2.39
HIST3H3Q16695 MTND4P4-201ENST00000439033 1366 ntBASIC0.1□□□□□ -2.39
HIST3H3Q16695 MIR122-201ENST00000385044 85 ntBASIC0.1□□□□□ -2.39
HIST3H3Q16695 SNORD105-201ENST00000386910 85 ntBASIC0.1□□□□□ -2.39
HIST3H3Q16695 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.1□□□□□ -2.39
HIST3H3Q16695 Y_RNA.598-201ENST00000410480 95 ntBASIC0.1□□□□□ -2.39
HIST3H3Q16695 AL008987.1-201ENST00000415528 237 ntBASIC0.1□□□□□ -2.39
HIST3H3Q16695 MRPS18CP6-201ENST00000423587 223 ntBASIC0.1□□□□□ -2.39
HIST3H3Q16695 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.1□□□□□ -2.39
HIST3H3Q16695 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.1□□□□□ -2.39
HIST3H3Q16695 RPS29P27-201ENST00000463711 170 ntBASIC0.1□□□□□ -2.39
HIST3H3Q16695 AC105417.1-201ENST00000514691 285 ntBASIC0.1□□□□□ -2.39
HIST3H3Q16695 MRPS36P4-201ENST00000534436 298 ntBASIC0.1□□□□□ -2.39
HIST3H3Q16695 MIR3941-201ENST00000582572 103 ntBASIC0.1□□□□□ -2.39
HIST3H3Q16695 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.1□□□□□ -2.39
HIST3H3Q16695 AC137590.2-201ENST00000619709 240 ntBASIC0.1□□□□□ -2.39
HIST3H3Q16695 AC005592.1-201ENST00000566527 1640 ntBASIC0.09□□□□□ -2.39
HIST3H3Q16695 SNORA25.3-201ENST00000363205 127 ntBASIC0.09□□□□□ -2.4
HIST3H3Q16695 Y_RNA.123-201ENST00000363338 102 ntBASIC0.09□□□□□ -2.4
HIST3H3Q16695 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
HIST3H3Q16695 RNU6-195P-201ENST00000411352 109 ntBASIC0.09□□□□□ -2.4
HIST3H3Q16695 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.09□□□□□ -2.4
HIST3H3Q16695 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.09□□□□□ -2.4
HIST3H3Q16695 UBE2D3P4-201ENST00000441973 436 ntBASIC0.09□□□□□ -2.4
HIST3H3Q16695 snoU13.18-201ENST00000459483 104 ntBASIC0.09□□□□□ -2.4
HIST3H3Q16695 RNU6-1037P-201ENST00000459571 107 ntBASIC0.09□□□□□ -2.4
HIST3H3Q16695 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.09□□□□□ -2.4
HIST3H3Q16695 SNORD11B-201ENST00000607707 90 ntBASIC0.09□□□□□ -2.4
HIST3H3Q16695 MIR6079-201ENST00000635807 62 ntBASIC0.09□□□□□ -2.4
HIST3H3Q16695 AL390237.1-201ENST00000404226 1415 ntBASIC0.08□□□□□ -2.4
HIST3H3Q16695 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
HIST3H3Q16695 RNY1-201ENST00000364228 113 ntBASIC0.08□□□□□ -2.4
HIST3H3Q16695 MIR526A1-201ENST00000384897 85 ntBASIC0.08□□□□□ -2.4
HIST3H3Q16695 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
HIST3H3Q16695 MIR1185-2-201ENST00000408687 86 ntBASIC0.08□□□□□ -2.4
HIST3H3Q16695 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.08□□□□□ -2.4
HIST3H3Q16695 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.08□□□□□ -2.4
HIST3H3Q16695 AC098592.1-201ENST00000419352 333 ntBASIC0.08□□□□□ -2.4
HIST3H3Q16695 RPL31P35-201ENST00000431058 377 ntBASIC0.08□□□□□ -2.4
HIST3H3Q16695 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.08□□□□□ -2.4
HIST3H3Q16695 ZNF114P1-201ENST00000453500 292 ntBASIC0.08□□□□□ -2.4
HIST3H3Q16695 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.08□□□□□ -2.4
HIST3H3Q16695 RNU7-167P-201ENST00000459160 62 ntBASIC0.08□□□□□ -2.4
HIST3H3Q16695 AP000870.1-201ENST00000472927 406 ntBASIC0.08□□□□□ -2.4
HIST3H3Q16695 RNU7-28P-201ENST00000516759 62 ntBASIC0.08□□□□□ -2.4
HIST3H3Q16695 AC087854.1-201ENST00000519706 414 ntBASIC0.08□□□□□ -2.4
HIST3H3Q16695 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.08□□□□□ -2.4
HIST3H3Q16695 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
HIST3H3Q16695 MIR4300-201ENST00000581016 96 ntBASIC0.08□□□□□ -2.4
HIST3H3Q16695 AL138726.1-201ENST00000614873 333 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms