Protein–RNA interactions for Protein: Q13133

NR1H3, Oxysterols receptor LXR-alpha, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3Q13133 SNORA73.2-201ENST00000364946 201 ntBASIC3.98□□□□□ -1.77
NR1H3Q13133 SNORA5A-201ENST00000384111 134 ntBASIC3.98□□□□□ -1.77
NR1H3Q13133 RNU6-429P-201ENST00000384582 108 ntBASIC3.98□□□□□ -1.77
NR1H3Q13133 AC016909.1-201ENST00000415916 166 ntBASIC3.98□□□□□ -1.77
NR1H3Q13133 RPS12P18-201ENST00000442381 270 ntBASIC3.98□□□□□ -1.77
NR1H3Q13133 AL357134.1-201ENST00000445848 426 ntBASIC3.98□□□□□ -1.77
NR1H3Q13133 RNA5SP153-201ENST00000516498 76 ntBASIC3.98□□□□□ -1.77
NR1H3Q13133 RN7SKP83-201ENST00000516512 178 ntBASIC3.98□□□□□ -1.77
NR1H3Q13133 RN7SKP209-201ENST00000516888 304 ntBASIC3.98□□□□□ -1.77
NR1H3Q13133 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.98□□□□□ -1.77
NR1H3Q13133 MTND5P34-201ENST00000568888 325 ntBASIC3.98□□□□□ -1.77
NR1H3Q13133 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.98□□□□□ -1.77
NR1H3Q13133 uc_338.4-201ENST00000616635 176 ntBASIC3.98□□□□□ -1.77
NR1H3Q13133 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NR1H3Q13133 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.98□□□□□ -1.77
NR1H3Q13133 AC058791.1-201ENST00000608412 3198 ntBASIC3.98□□□□□ -1.77
NR1H3Q13133 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NR1H3Q13133 MAPK10-372ENST00000641954 3413 ntBASIC3.98□□□□□ -1.77
NR1H3Q13133 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NR1H3Q13133 AC103988.1-201ENST00000566382 2177 ntBASIC3.97□□□□□ -1.77
NR1H3Q13133 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.97□□□□□ -1.77
NR1H3Q13133 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.97□□□□□ -1.77
NR1H3Q13133 GABRG2-229ENST00000641017 3628 ntBASIC3.97□□□□□ -1.77
NR1H3Q13133 U8.1-201ENST00000362843 134 ntBASIC3.97□□□□□ -1.77
NR1H3Q13133 Y_RNA.120-201ENST00000363304 110 ntBASIC3.97□□□□□ -1.77
NR1H3Q13133 SNORD6-201ENST00000365444 73 ntBASIC3.97□□□□□ -1.77
NR1H3Q13133 U8.11-201ENST00000384699 133 ntBASIC3.97□□□□□ -1.77
NR1H3Q13133 HMGN2P18-201ENST00000450680 270 ntBASIC3.97□□□□□ -1.77
NR1H3Q13133 U8.18-201ENST00000459285 133 ntBASIC3.97□□□□□ -1.77
NR1H3Q13133 AL133162.1-201ENST00000463228 453 ntBASIC3.97□□□□□ -1.77
NR1H3Q13133 RPS29P21-201ENST00000496272 170 ntBASIC3.97□□□□□ -1.77
NR1H3Q13133 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.97□□□□□ -1.77
NR1H3Q13133 RNA5SP490-201ENST00000517141 136 ntBASIC3.97□□□□□ -1.77
NR1H3Q13133 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.97□□□□□ -1.77
NR1H3Q13133 MIR5187-201ENST00000583479 76 ntBASIC3.97□□□□□ -1.77
NR1H3Q13133 MIR4438-201ENST00000585271 93 ntBASIC3.97□□□□□ -1.77
NR1H3Q13133 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.97□□□□□ -1.77
NR1H3Q13133 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NR1H3Q13133 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
NR1H3Q13133 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.96□□□□□ -1.77
NR1H3Q13133 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
NR1H3Q13133 RNU1-22P-201ENST00000363334 158 ntBASIC3.96□□□□□ -1.78
NR1H3Q13133 RNY4P18-201ENST00000391107 89 ntBASIC3.96□□□□□ -1.78
NR1H3Q13133 SNORA11.1-201ENST00000408133 129 ntBASIC3.96□□□□□ -1.78
NR1H3Q13133 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.96□□□□□ -1.78
NR1H3Q13133 AL035423.1-201ENST00000420331 213 ntBASIC3.96□□□□□ -1.78
NR1H3Q13133 RNU6-772P-201ENST00000516042 105 ntBASIC3.96□□□□□ -1.78
NR1H3Q13133 SNORD77.4-201ENST00000516158 81 ntBASIC3.96□□□□□ -1.78
NR1H3Q13133 RNU7-172P-201ENST00000517125 64 ntBASIC3.96□□□□□ -1.78
NR1H3Q13133 AC022695.1-201ENST00000522089 237 ntBASIC3.96□□□□□ -1.78
NR1H3Q13133 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.96□□□□□ -1.78
NR1H3Q13133 AC131055.1-201ENST00000584626 316 ntBASIC3.96□□□□□ -1.78
NR1H3Q13133 U7.8-201ENST00000619968 63 ntBASIC3.96□□□□□ -1.78
NR1H3Q13133 AC002064.3-201ENST00000623448 346 ntBASIC3.96□□□□□ -1.78
NR1H3Q13133 AC009093.8-201ENST00000641769 292 ntBASIC3.96□□□□□ -1.78
NR1H3Q13133 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NR1H3Q13133 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NR1H3Q13133 AP001486.2-201ENST00000561652 5113 ntBASIC3.95□□□□□ -1.78
NR1H3Q13133 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NR1H3Q13133 AC138915.1-201ENST00000565427 1685 ntBASIC3.95□□□□□ -1.78
NR1H3Q13133 SNORA63.1-201ENST00000362493 131 ntBASIC3.95□□□□□ -1.78
NR1H3Q13133 RNA5SP139-201ENST00000364340 117 ntBASIC3.95□□□□□ -1.78
NR1H3Q13133 SNORA70.4-201ENST00000365509 134 ntBASIC3.95□□□□□ -1.78
NR1H3Q13133 SNORD18B-201ENST00000365659 72 ntBASIC3.95□□□□□ -1.78
NR1H3Q13133 MIR3074-201ENST00000384885 81 ntBASIC3.95□□□□□ -1.78
NR1H3Q13133 MIR218-1-201ENST00000384999 110 ntBASIC3.95□□□□□ -1.78
NR1H3Q13133 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
NR1H3Q13133 SNORA26-201ENST00000391286 122 ntBASIC3.95□□□□□ -1.78
NR1H3Q13133 Z98941.1-201ENST00000407764 100 ntBASIC3.95□□□□□ -1.78
NR1H3Q13133 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.95□□□□□ -1.78
NR1H3Q13133 AC097462.1-201ENST00000514125 324 ntBASIC3.95□□□□□ -1.78
NR1H3Q13133 RN7SKP18-201ENST00000516005 275 ntBASIC3.95□□□□□ -1.78
NR1H3Q13133 SNORD59.2-201ENST00000516873 68 ntBASIC3.95□□□□□ -1.78
NR1H3Q13133 MIR1248-201ENST00000629190 106 ntBASIC3.95□□□□□ -1.78
NR1H3Q13133 U6.95-201ENST00000636931 70 ntBASIC3.95□□□□□ -1.78
NR1H3Q13133 MIR3914-2-201ENST00000637339 95 ntBASIC3.95□□□□□ -1.78
NR1H3Q13133 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.95□□□□□ -1.78
NR1H3Q13133 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.95□□□□□ -1.78
NR1H3Q13133 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
NR1H3Q13133 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NR1H3Q13133 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.94□□□□□ -1.78
NR1H3Q13133 RNU6-546P-201ENST00000383991 107 ntBASIC3.94□□□□□ -1.78
NR1H3Q13133 MIR199A2-201ENST00000385289 110 ntBASIC3.94□□□□□ -1.78
NR1H3Q13133 RPS4XP11-201ENST00000446897 772 ntBASIC3.94□□□□□ -1.78
NR1H3Q13133 RPL27AP5-201ENST00000469428 449 ntBASIC3.94□□□□□ -1.78
NR1H3Q13133 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.94□□□□□ -1.78
NR1H3Q13133 AC133485.4-201ENST00000561835 220 ntBASIC3.94□□□□□ -1.78
NR1H3Q13133 AC138907.4-201ENST00000570107 226 ntBASIC3.94□□□□□ -1.78
NR1H3Q13133 MIR3117-201ENST00000584034 78 ntBASIC3.94□□□□□ -1.78
NR1H3Q13133 AC090115.4-201ENST00000609970 188 ntBASIC3.94□□□□□ -1.78
NR1H3Q13133 AC012314.7-201ENST00000619693 93 ntBASIC3.94□□□□□ -1.78
NR1H3Q13133 MIR7157-201ENST00000635801 60 ntBASIC3.94□□□□□ -1.78
NR1H3Q13133 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NR1H3Q13133 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NR1H3Q13133 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NR1H3Q13133 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
NR1H3Q13133 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.94□□□□□ -1.78
NR1H3Q13133 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
NR1H3Q13133 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
NR1H3Q13133 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms