Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AC023043.3-201ENST00000593113 385 ntBASIC3.52□□□□□ -1.85
SOX4Q06945 AP003357.1-201ENST00000604497 148 ntBASIC3.52□□□□□ -1.85
SOX4Q06945 AC005000.2-201ENST00000605468 310 ntBASIC3.52□□□□□ -1.85
SOX4Q06945 XIST_intron.1-201ENST00000619444 68 ntBASIC3.52□□□□□ -1.85
SOX4Q06945 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
SOX4Q06945 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
SOX4Q06945 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.52□□□□□ -1.85
SOX4Q06945 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.52□□□□□ -1.85
SOX4Q06945 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SOX4Q06945 RNU6-235P-201ENST00000362644 107 ntBASIC3.51□□□□□ -1.85
SOX4Q06945 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SOX4Q06945 SNORD116-13-201ENST00000384408 92 ntBASIC3.51□□□□□ -1.85
SOX4Q06945 MIR128-1-201ENST00000384921 82 ntBASIC3.51□□□□□ -1.85
SOX4Q06945 Y_RNA.584-201ENST00000391090 114 ntBASIC3.51□□□□□ -1.85
SOX4Q06945 AL353705.1-201ENST00000433468 480 ntBASIC3.51□□□□□ -1.85
SOX4Q06945 AL121890.1-201ENST00000435457 205 ntBASIC3.51□□□□□ -1.85
SOX4Q06945 RPL36AP48-201ENST00000485521 314 ntBASIC3.51□□□□□ -1.85
SOX4Q06945 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.51□□□□□ -1.85
SOX4Q06945 Y_RNA.709-201ENST00000516952 92 ntBASIC3.51□□□□□ -1.85
SOX4Q06945 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.51□□□□□ -1.85
SOX4Q06945 MIR3186-201ENST00000577404 85 ntBASIC3.51□□□□□ -1.85
SOX4Q06945 MIR2682-201ENST00000580305 110 ntBASIC3.51□□□□□ -1.85
SOX4Q06945 MIR378D2-201ENST00000580636 98 ntBASIC3.51□□□□□ -1.85
SOX4Q06945 POLR3GP1-201ENST00000594073 261 ntBASIC3.51□□□□□ -1.85
SOX4Q06945 AC120024.3-201ENST00000603167 156 ntBASIC3.51□□□□□ -1.85
SOX4Q06945 AF117829.1-206ENST00000621883 3802 ntBASIC3.51□□□□□ -1.85
SOX4Q06945 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SOX4Q06945 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.51□□□□□ -1.85
SOX4Q06945 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SOX4Q06945 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SOX4Q06945 MIR30E-201ENST00000362104 92 ntBASIC3.5□□□□□ -1.85
SOX4Q06945 RNU6-1323P-201ENST00000384025 107 ntBASIC3.5□□□□□ -1.85
SOX4Q06945 SNORA20B-201ENST00000384220 132 ntBASIC3.5□□□□□ -1.85
SOX4Q06945 SNORA79-201ENST00000408376 140 ntBASIC3.5□□□□□ -1.85
SOX4Q06945 AL158823.1-201ENST00000418441 478 ntBASIC3.5□□□□□ -1.85
SOX4Q06945 AL357134.1-201ENST00000445848 426 ntBASIC3.5□□□□□ -1.85
SOX4Q06945 RPL23AP67-201ENST00000465341 474 ntBASIC3.5□□□□□ -1.85
SOX4Q06945 HMGN2P9-201ENST00000476875 229 ntBASIC3.5□□□□□ -1.85
SOX4Q06945 AC006445.1-201ENST00000491925 405 ntBASIC3.5□□□□□ -1.85
SOX4Q06945 RNU6-1098P-201ENST00000516772 96 ntBASIC3.5□□□□□ -1.85
SOX4Q06945 RNU6-1231P-201ENST00000517185 103 ntBASIC3.5□□□□□ -1.85
SOX4Q06945 AC093331.1-201ENST00000521474 169 ntBASIC3.5□□□□□ -1.85
SOX4Q06945 AC079598.5-201ENST00000547460 117 ntBASIC3.5□□□□□ -1.85
SOX4Q06945 Y_RNA.757-201ENST00000578934 114 ntBASIC3.5□□□□□ -1.85
SOX4Q06945 AL670379.2-201ENST00000604983 252 ntBASIC3.5□□□□□ -1.85
SOX4Q06945 uc_338.1-201ENST00000612113 180 ntBASIC3.5□□□□□ -1.85
SOX4Q06945 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.5□□□□□ -1.85
SOX4Q06945 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.5□□□□□ -1.85
SOX4Q06945 AC091152.2-201ENST00000591628 2569 ntBASIC3.5□□□□□ -1.85
SOX4Q06945 AC017071.1-201ENST00000564407 2204 ntBASIC3.5□□□□□ -1.85
SOX4Q06945 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
SOX4Q06945 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SOX4Q06945 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
SOX4Q06945 AL159152.1-201ENST00000635019 2587 ntBASIC3.49□□□□□ -1.85
SOX4Q06945 SNORA25.7-201ENST00000364375 127 ntBASIC3.49□□□□□ -1.85
SOX4Q06945 SNORD32B-201ENST00000364460 84 ntBASIC3.49□□□□□ -1.85
SOX4Q06945 Y_RNA.587-201ENST00000391210 103 ntBASIC3.49□□□□□ -1.85
SOX4Q06945 AL139095.1-201ENST00000404326 391 ntBASIC3.49□□□□□ -1.85
SOX4Q06945 AC006028.1-201ENST00000438379 402 ntBASIC3.49□□□□□ -1.85
SOX4Q06945 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.49□□□□□ -1.85
SOX4Q06945 AC021205.2-201ENST00000480069 347 ntBASIC3.49□□□□□ -1.85
SOX4Q06945 RNU5F-4P-201ENST00000516581 114 ntBASIC3.49□□□□□ -1.85
SOX4Q06945 MTND5P34-201ENST00000568888 325 ntBASIC3.49□□□□□ -1.85
SOX4Q06945 MIR5047-201ENST00000579212 100 ntBASIC3.49□□□□□ -1.85
SOX4Q06945 AL138880.2-201ENST00000616214 239 ntBASIC3.49□□□□□ -1.85
SOX4Q06945 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.49□□□□□ -1.85
SOX4Q06945 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.49□□□□□ -1.85
SOX4Q06945 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SOX4Q06945 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.48□□□□□ -1.85
SOX4Q06945 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SOX4Q06945 AC010680.1-201ENST00000590024 3590 ntBASIC3.48□□□□□ -1.85
SOX4Q06945 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.48□□□□□ -1.85
SOX4Q06945 Y_RNA.43-201ENST00000362670 111 ntBASIC3.48□□□□□ -1.85
SOX4Q06945 MIR591-201ENST00000385290 95 ntBASIC3.48□□□□□ -1.85
SOX4Q06945 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SOX4Q06945 RNU4-47P-201ENST00000410876 114 ntBASIC3.48□□□□□ -1.85
SOX4Q06945 ARF4P2-201ENST00000430209 526 ntBASIC3.48□□□□□ -1.85
SOX4Q06945 AC245047.4-201ENST00000433189 144 ntBASIC3.48□□□□□ -1.85
SOX4Q06945 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.48□□□□□ -1.85
SOX4Q06945 RPL23AP54-201ENST00000495129 419 ntBASIC3.48□□□□□ -1.85
SOX4Q06945 AC005972.2-201ENST00000604690 348 ntBASIC3.48□□□□□ -1.85
SOX4Q06945 RNVU1-4-201ENST00000612985 164 ntBASIC3.48□□□□□ -1.85
SOX4Q06945 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SOX4Q06945 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SOX4Q06945 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SOX4Q06945 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SOX4Q06945 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.47□□□□□ -1.85
SOX4Q06945 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.47□□□□□ -1.85
SOX4Q06945 SNORA27.1-201ENST00000362604 124 ntBASIC3.47□□□□□ -1.85
SOX4Q06945 RNU6-525P-201ENST00000363685 104 ntBASIC3.47□□□□□ -1.85
SOX4Q06945 RNU6-1336P-201ENST00000383886 109 ntBASIC3.47□□□□□ -1.85
SOX4Q06945 SNORA22-201ENST00000383907 134 ntBASIC3.47□□□□□ -1.85
SOX4Q06945 RNA5SP496-201ENST00000391240 109 ntBASIC3.47□□□□□ -1.85
SOX4Q06945 Z92545.1-201ENST00000411782 234 ntBASIC3.47□□□□□ -1.85
SOX4Q06945 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.47□□□□□ -1.85
SOX4Q06945 RNU6-437P-201ENST00000459408 95 ntBASIC3.47□□□□□ -1.85
SOX4Q06945 RNU7-57P-201ENST00000459540 60 ntBASIC3.47□□□□□ -1.85
SOX4Q06945 RN7SL863P-201ENST00000462370 296 ntBASIC3.47□□□□□ -1.85
SOX4Q06945 RPL36AP21-201ENST00000490372 323 ntBASIC3.47□□□□□ -1.85
SOX4Q06945 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms