Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 RNU6-10P-201ENST00000384036 107 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 RNU6-163P-201ENST00000384396 106 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 MIR516B2-201ENST00000385190 85 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 MCFD2P1-201ENST00000417812 300 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 AC096531.1-201ENST00000419107 107 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 ZNF885P-201ENST00000420174 1098 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 AL117351.1-201ENST00000438864 766 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 AC104982.1-201ENST00000478775 574 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 AC091885.1-201ENST00000506658 268 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 SUMO2P5-201ENST00000506790 245 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 AC119751.4-201ENST00000507498 357 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
COL7A1Q02388 SCARNA17-201ENST00000516183 144 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 RNU6-1041P-201ENST00000516254 102 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 RNA5SP481-201ENST00000516814 122 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 RNA5SP94-201ENST00000516917 108 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 RNU6-703P-201ENST00000516946 107 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 AC131281.1-201ENST00000522984 164 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 AP001189.2-201ENST00000527320 189 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.04□□□□□ -2.42
COL7A1Q02388 AC087883.1-201ENST00000551882 391 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-0.04□□□□□ -2.42
COL7A1Q02388 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.04□□□□□ -2.42
COL7A1Q02388 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.04□□□□□ -2.42
COL7A1Q02388 MIR4324-201ENST00000584846 72 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-0.04□□□□□ -2.42
COL7A1Q02388 AL138889.2-201ENST00000603883 242 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 AC108747.1-201ENST00000609508 535 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 MIR8076-201ENST00000611401 83 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 MIR548AZ-201ENST00000616567 95 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 uc_338.11-201ENST00000619132 160 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 AC098679.4-201ENST00000624241 654 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 RNU6-161P-201ENST00000363051 106 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 SNORA72.1-201ENST00000363485 129 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 SNORD115-24-201ENST00000363528 82 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 SNORD114-24-201ENST00000365029 72 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 RNU6-245P-201ENST00000384020 107 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 RNU6-378P-201ENST00000384324 107 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 RNU6-1122P-201ENST00000384449 107 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 RNU6-1179P-201ENST00000384667 107 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 MIR520A-201ENST00000384862 85 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 SNORA40.2-201ENST00000390847 128 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 U8.16-201ENST00000391279 133 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 MIR548H2-201ENST00000408874 88 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.04□□□□□ -2.42
COL7A1Q02388 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.04□□□□□ -2.42
COL7A1Q02388 MTND4P3-201ENST00000417829 541 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.04□□□□□ -2.42
COL7A1Q02388 AL512326.2-201ENST00000426359 151 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 AC002486.1-201ENST00000435098 391 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 AC244670.1-201ENST00000436879 112 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 AL392103.1-201ENST00000447000 198 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.04□□□□□ -2.42
COL7A1Q02388 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-0.04□□□□□ -2.42
COL7A1Q02388 RNU7-140P-201ENST00000459546 60 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.04□□□□□ -2.42
COL7A1Q02388 MTCO3P42-201ENST00000509488 518 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.04□□□□□ -2.42
COL7A1Q02388 MTCO3P39-201ENST00000514812 518 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 RNU6-583P-201ENST00000516012 92 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 RNA5SP216-201ENST00000516111 123 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 RNA5SP180-201ENST00000516181 101 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 RNU6-150P-201ENST00000516237 95 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 Y_RNA.689-201ENST00000516589 107 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 SNORA74.3-201ENST00000517108 154 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 RNU6-897P-201ENST00000517135 105 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC-0.04□□□□□ -2.42
COL7A1Q02388 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.04□□□□□ -2.42
COL7A1Q02388 AP003716.2-201ENST00000528260 108 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 AC090888.2-201ENST00000559765 1144 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 AC002400.1-201ENST00000569310 726 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 MIR4432-201ENST00000581823 84 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 MIR3192-201ENST00000584920 77 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 AC068790.2-201ENST00000602601 557 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 AC144521.1-201ENST00000607148 956 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 AL078595.3-201ENST00000623815 1166 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 AC027279.3-201ENST00000625055 122 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 AL157786.1-207ENST00000627771 695 ntBASIC-0.04□□□□□ -2.42
COL7A1Q02388 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
COL7A1Q02388 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 SNORA33-201ENST00000363664 130 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 Y_RNA.480-201ENST00000384364 102 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 RNU6-298P-201ENST00000390888 96 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 RNA5SP201-201ENST00000410316 124 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 MTND2P18-201ENST00000419962 1030 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 MTCYBP10-201ENST00000424905 650 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 MTCO2P23-201ENST00000425216 680 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 TIMM9P3-201ENST00000428659 274 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 AL162725.1-201ENST00000435405 301 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-0.05□□□□□ -2.42
COL7A1Q02388 AC113347.3-201ENST00000509113 148 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 MTND3P5-201ENST00000512798 333 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 RNA5SP227-201ENST00000516184 113 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 SCARNA24.1-201ENST00000516465 137 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 RNY4-201ENST00000516507 96 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms