Protein–RNA interactions for Protein: Q00341

HDLBP, Vigilin, humanhuman

Known RBP Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBPQ00341 RNU6-847P-201ENST00000411115 108 ntBASIC3.43□□□□□ -1.86
HDLBPQ00341 AC009963.1-201ENST00000417265 157 ntBASIC3.43□□□□□ -1.86
HDLBPQ00341 RNU7-57P-201ENST00000459540 60 ntBASIC3.43□□□□□ -1.86
HDLBPQ00341 HMGB3P17-201ENST00000504195 649 ntBASIC3.43□□□□□ -1.86
HDLBPQ00341 AC008749.1-201ENST00000597650 306 ntBASIC3.43□□□□□ -1.86
HDLBPQ00341 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.43□□□□□ -1.86
HDLBPQ00341 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
HDLBPQ00341 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HDLBPQ00341 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
HDLBPQ00341 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.42□□□□□ -1.86
HDLBPQ00341 Y_RNA.352-201ENST00000365439 102 ntBASIC3.42□□□□□ -1.86
HDLBPQ00341 Y_RNA.447-201ENST00000384184 113 ntBASIC3.42□□□□□ -1.86
HDLBPQ00341 RNU6-1248P-201ENST00000391096 64 ntBASIC3.42□□□□□ -1.86
HDLBPQ00341 MIR1185-2-201ENST00000408687 86 ntBASIC3.42□□□□□ -1.86
HDLBPQ00341 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.42□□□□□ -1.86
HDLBPQ00341 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.42□□□□□ -1.86
HDLBPQ00341 RN7SL633P-201ENST00000488974 297 ntBASIC3.42□□□□□ -1.86
HDLBPQ00341 SERF1AP1-201ENST00000514575 187 ntBASIC3.42□□□□□ -1.86
HDLBPQ00341 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.42□□□□□ -1.86
HDLBPQ00341 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.42□□□□□ -1.86
HDLBPQ00341 snoZ196.1-201ENST00000625269 89 ntBASIC3.42□□□□□ -1.86
HDLBPQ00341 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
HDLBPQ00341 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
HDLBPQ00341 SNORA25.1-201ENST00000362326 128 ntBASIC3.41□□□□□ -1.86
HDLBPQ00341 RNU6-1266P-201ENST00000362794 105 ntBASIC3.41□□□□□ -1.86
HDLBPQ00341 Y_RNA.101-201ENST00000363154 102 ntBASIC3.41□□□□□ -1.86
HDLBPQ00341 RNU6-743P-201ENST00000364151 106 ntBASIC3.41□□□□□ -1.86
HDLBPQ00341 SNORA25B-201ENST00000365507 128 ntBASIC3.41□□□□□ -1.86
HDLBPQ00341 Y_RNA.383-201ENST00000383855 97 ntBASIC3.41□□□□□ -1.86
HDLBPQ00341 RN7SKP123-201ENST00000410732 291 ntBASIC3.41□□□□□ -1.86
HDLBPQ00341 RPL19P1-201ENST00000411635 428 ntBASIC3.41□□□□□ -1.86
HDLBPQ00341 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.41□□□□□ -1.86
HDLBPQ00341 RNU6-667P-201ENST00000517186 102 ntBASIC3.41□□□□□ -1.86
HDLBPQ00341 RNU2-12P-201ENST00000517216 168 ntBASIC3.41□□□□□ -1.86
HDLBPQ00341 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.41□□□□□ -1.86
HDLBPQ00341 AC055872.1-201ENST00000570978 278 ntBASIC3.41□□□□□ -1.86
HDLBPQ00341 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HDLBPQ00341 RNU6-1235P-201ENST00000384559 107 ntBASIC3.4□□□□□ -1.87
HDLBPQ00341 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HDLBPQ00341 SRIP3-201ENST00000413200 219 ntBASIC3.4□□□□□ -1.87
HDLBPQ00341 AC008134.1-201ENST00000420943 193 ntBASIC3.4□□□□□ -1.87
HDLBPQ00341 SNORD109B-201ENST00000458961 67 ntBASIC3.4□□□□□ -1.87
HDLBPQ00341 SNORD109A-201ENST00000459128 67 ntBASIC3.4□□□□□ -1.87
HDLBPQ00341 RNU6-498P-201ENST00000459468 107 ntBASIC3.4□□□□□ -1.87
HDLBPQ00341 AP002001.1-203ENST00000534002 267 ntBASIC3.4□□□□□ -1.87
HDLBPQ00341 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.4□□□□□ -1.87
HDLBPQ00341 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.4□□□□□ -1.87
HDLBPQ00341 AP006437.1-201ENST00000641440 3685 ntBASIC3.4□□□□□ -1.87
HDLBPQ00341 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.4□□□□□ -1.87
HDLBPQ00341 Y_RNA.136-201ENST00000363444 102 ntBASIC3.39□□□□□ -1.87
HDLBPQ00341 Y_RNA.286-201ENST00000364813 102 ntBASIC3.39□□□□□ -1.87
HDLBPQ00341 AL138827.1-201ENST00000402666 306 ntBASIC3.39□□□□□ -1.87
HDLBPQ00341 RNA5SP21-201ENST00000410917 96 ntBASIC3.39□□□□□ -1.87
HDLBPQ00341 AC123900.1-201ENST00000420390 96 ntBASIC3.39□□□□□ -1.87
HDLBPQ00341 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.39□□□□□ -1.87
HDLBPQ00341 AC093259.1-201ENST00000509755 300 ntBASIC3.39□□□□□ -1.87
HDLBPQ00341 RNU6-1023P-201ENST00000516137 106 ntBASIC3.39□□□□□ -1.87
HDLBPQ00341 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.39□□□□□ -1.87
HDLBPQ00341 AC012433.1-201ENST00000588916 398 ntBASIC3.39□□□□□ -1.87
HDLBPQ00341 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HDLBPQ00341 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HDLBPQ00341 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.39□□□□□ -1.87
HDLBPQ00341 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HDLBPQ00341 Y_RNA.16-201ENST00000362421 102 ntBASIC3.38□□□□□ -1.87
HDLBPQ00341 SNORA20.1-201ENST00000364790 130 ntBASIC3.38□□□□□ -1.87
HDLBPQ00341 Y_RNA.416-201ENST00000384014 113 ntBASIC3.38□□□□□ -1.87
HDLBPQ00341 SNORA46-201ENST00000384762 135 ntBASIC3.38□□□□□ -1.87
HDLBPQ00341 AC244505.4-201ENST00000434905 287 ntBASIC3.38□□□□□ -1.87
HDLBPQ00341 SSXP5-201ENST00000443473 287 ntBASIC3.38□□□□□ -1.87
HDLBPQ00341 RNU6-221P-201ENST00000459541 99 ntBASIC3.38□□□□□ -1.87
HDLBPQ00341 SNORA4.4-201ENST00000515921 135 ntBASIC3.38□□□□□ -1.87
HDLBPQ00341 SNORA70.12-201ENST00000516084 153 ntBASIC3.38□□□□□ -1.87
HDLBPQ00341 SCARNA24.2-201ENST00000516968 130 ntBASIC3.38□□□□□ -1.87
HDLBPQ00341 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.38□□□□□ -1.87
HDLBPQ00341 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HDLBPQ00341 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HDLBPQ00341 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
HDLBPQ00341 RNU4-82P-201ENST00000362443 140 ntBASIC3.37□□□□□ -1.87
HDLBPQ00341 SNORA38-201ENST00000363946 132 ntBASIC3.37□□□□□ -1.87
HDLBPQ00341 RNU6-324P-201ENST00000363957 106 ntBASIC3.37□□□□□ -1.87
HDLBPQ00341 Y_RNA.332-201ENST00000365271 113 ntBASIC3.37□□□□□ -1.87
HDLBPQ00341 RNU1-109P-201ENST00000383960 147 ntBASIC3.37□□□□□ -1.87
HDLBPQ00341 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.37□□□□□ -1.87
HDLBPQ00341 AL357134.1-201ENST00000445848 426 ntBASIC3.37□□□□□ -1.87
HDLBPQ00341 RN7SKP43-201ENST00000516173 320 ntBASIC3.37□□□□□ -1.87
HDLBPQ00341 NDUFA5P6-201ENST00000542110 379 ntBASIC3.37□□□□□ -1.87
HDLBPQ00341 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.37□□□□□ -1.87
HDLBPQ00341 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
HDLBPQ00341 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.37□□□□□ -1.87
HDLBPQ00341 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HDLBPQ00341 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.36□□□□□ -1.87
HDLBPQ00341 RNU6-454P-201ENST00000364292 107 ntBASIC3.36□□□□□ -1.87
HDLBPQ00341 RNU1-112P-201ENST00000364401 164 ntBASIC3.36□□□□□ -1.87
HDLBPQ00341 Y_RNA.243-201ENST00000364481 109 ntBASIC3.36□□□□□ -1.87
HDLBPQ00341 U3.40-201ENST00000408706 208 ntBASIC3.36□□□□□ -1.87
HDLBPQ00341 RNU6-710P-201ENST00000410424 105 ntBASIC3.36□□□□□ -1.87
HDLBPQ00341 RNU2-52P-201ENST00000410680 190 ntBASIC3.36□□□□□ -1.87
HDLBPQ00341 RNU2-48P-201ENST00000410694 191 ntBASIC3.36□□□□□ -1.87
HDLBPQ00341 RN7SKP58-201ENST00000411010 305 ntBASIC3.36□□□□□ -1.87
HDLBPQ00341 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms