Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 PCMTD1P2-201ENST00000565017 355 ntBASIC0.04□□□□□ -2.4
H3F3AP84243 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.04□□□□□ -2.4
H3F3AP84243 AL133173.2-201ENST00000614270 90 ntBASIC0.04□□□□□ -2.4
H3F3AP84243 AC008133.2-201ENST00000624540 351 ntBASIC0.04□□□□□ -2.4
H3F3AP84243 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
H3F3AP84243 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.03□□□□□ -2.4
H3F3AP84243 MIR330-201ENST00000362196 94 ntBASIC0.03□□□□□ -2.4
H3F3AP84243 RNU6-1200P-201ENST00000384162 107 ntBASIC0.03□□□□□ -2.4
H3F3AP84243 MIR193B-201ENST00000384907 83 ntBASIC0.03□□□□□ -2.4
H3F3AP84243 MIR32-201ENST00000384965 70 ntBASIC0.03□□□□□ -2.4
H3F3AP84243 RNU6-410P-201ENST00000517006 107 ntBASIC0.03□□□□□ -2.4
H3F3AP84243 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.03□□□□□ -2.4
H3F3AP84243 MIR4300-201ENST00000581016 96 ntBASIC0.03□□□□□ -2.4
H3F3AP84243 AC068790.2-201ENST00000602601 557 ntBASIC0.03□□□□□ -2.4
H3F3AP84243 AC122133.1-201ENST00000613964 233 ntBASIC0.03□□□□□ -2.4
H3F3AP84243 AC091925.1-201ENST00000623204 462 ntBASIC0.03□□□□□ -2.4
H3F3AP84243 AL390237.1-201ENST00000404226 1415 ntBASIC0.03□□□□□ -2.41
H3F3AP84243 RNU5B-2P-201ENST00000363036 113 ntBASIC0.02□□□□□ -2.41
H3F3AP84243 SNORA25.3-201ENST00000363205 127 ntBASIC0.02□□□□□ -2.41
H3F3AP84243 RNU6-1097P-201ENST00000363586 107 ntBASIC0.02□□□□□ -2.41
H3F3AP84243 RNU4-45P-201ENST00000365469 141 ntBASIC0.02□□□□□ -2.41
H3F3AP84243 RNU6-83P-201ENST00000384568 112 ntBASIC0.02□□□□□ -2.41
H3F3AP84243 RNU6-1106P-201ENST00000390845 107 ntBASIC0.02□□□□□ -2.41
H3F3AP84243 RNA5SP219-201ENST00000390940 113 ntBASIC0.02□□□□□ -2.41
H3F3AP84243 MIR320B2-201ENST00000408479 138 ntBASIC0.02□□□□□ -2.41
H3F3AP84243 MIR1185-1-201ENST00000408598 86 ntBASIC0.02□□□□□ -2.41
H3F3AP84243 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.02□□□□□ -2.41
H3F3AP84243 AL365184.2-201ENST00000431139 435 ntBASIC0.02□□□□□ -2.41
H3F3AP84243 AC104850.1-201ENST00000435940 476 ntBASIC0.02□□□□□ -2.41
H3F3AP84243 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.02□□□□□ -2.41
H3F3AP84243 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.02□□□□□ -2.41
H3F3AP84243 USP9YP29-201ENST00000445112 563 ntBASIC0.02□□□□□ -2.41
H3F3AP84243 RNU4-77P-201ENST00000516692 156 ntBASIC0.02□□□□□ -2.41
H3F3AP84243 AC090572.1-201ENST00000519251 160 ntBASIC0.02□□□□□ -2.41
H3F3AP84243 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.02□□□□□ -2.41
H3F3AP84243 7SK.7-201ENST00000603504 247 ntBASIC0.02□□□□□ -2.41
H3F3AP84243 RNU6-85P-201ENST00000605989 107 ntBASIC0.02□□□□□ -2.41
H3F3AP84243 MIR7111-201ENST00000619751 72 ntBASIC0.02□□□□□ -2.41
H3F3AP84243 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.02□□□□□ -2.41
H3F3AP84243 RNU6-1266P-201ENST00000362794 105 ntBASIC0.01□□□□□ -2.41
H3F3AP84243 SNORD44.1-201ENST00000363202 61 ntBASIC0.01□□□□□ -2.41
H3F3AP84243 RNU6-1029P-201ENST00000384109 107 ntBASIC0.01□□□□□ -2.41
H3F3AP84243 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.01□□□□□ -2.41
H3F3AP84243 MTCO2P18-201ENST00000457151 658 ntBASIC0.01□□□□□ -2.41
H3F3AP84243 RPS29P15-201ENST00000458329 171 ntBASIC0.01□□□□□ -2.41
H3F3AP84243 RNU7-182P-201ENST00000459009 62 ntBASIC0.01□□□□□ -2.41
H3F3AP84243 RNU2-56P-201ENST00000516826 190 ntBASIC0.01□□□□□ -2.41
H3F3AP84243 RNU6-612P-201ENST00000516909 102 ntBASIC0.01□□□□□ -2.41
H3F3AP84243 AF235103.2-201ENST00000525753 346 ntBASIC0.01□□□□□ -2.41
H3F3AP84243 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.01□□□□□ -2.41
H3F3AP84243 AGGF1P4-201ENST00000568249 801 ntBASIC0.01□□□□□ -2.41
H3F3AP84243 MIR1273G-201ENST00000577677 100 ntBASIC0.01□□□□□ -2.41
H3F3AP84243 MIR4775-201ENST00000581168 75 ntBASIC0.01□□□□□ -2.41
H3F3AP84243 AP000811.1-201ENST00000603803 651 ntBASIC0.01□□□□□ -2.41
H3F3AP84243 AL157392.4-201ENST00000609756 345 ntBASIC0.01□□□□□ -2.41
H3F3AP84243 AC027807.2-201ENST00000616099 408 ntBASIC0.01□□□□□ -2.41
H3F3AP84243 SEPT14P19-203ENST00000633205 211 ntBASIC0.01□□□□□ -2.41
H3F3AP84243 RNA5SP62-201ENST00000363457 110 ntBASIC0□□□□□ -2.41
H3F3AP84243 RNU4-41P-201ENST00000364426 143 ntBASIC0□□□□□ -2.41
H3F3AP84243 RNU6-1297P-201ENST00000384415 104 ntBASIC0□□□□□ -2.41
H3F3AP84243 MIR526A1-201ENST00000384897 85 ntBASIC0□□□□□ -2.41
H3F3AP84243 MIR454-201ENST00000390180 115 ntBASIC0□□□□□ -2.41
H3F3AP84243 MIR1827-201ENST00000408549 66 ntBASIC0□□□□□ -2.41
H3F3AP84243 USP9YP12-201ENST00000450481 570 ntBASIC0□□□□□ -2.41
H3F3AP84243 AC007215.1-201ENST00000464893 276 ntBASIC0□□□□□ -2.41
H3F3AP84243 AP000870.1-201ENST00000472927 406 ntBASIC0□□□□□ -2.41
H3F3AP84243 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0□□□□□ -2.41
H3F3AP84243 AC091951.3-201ENST00000504093 246 ntBASIC0□□□□□ -2.41
H3F3AP84243 CYCTP-201ENST00000504253 315 ntBASIC0□□□□□ -2.41
H3F3AP84243 SNORA62.5-201ENST00000516634 120 ntBASIC0□□□□□ -2.41
H3F3AP84243 RNU6-58P-201ENST00000517143 103 ntBASIC0□□□□□ -2.41
H3F3AP84243 AP003327.1-201ENST00000529684 127 ntBASIC0□□□□□ -2.41
H3F3AP84243 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0□□□□□ -2.41
H3F3AP84243 AC005592.1-201ENST00000566527 1640 ntBASIC0□□□□□ -2.41
H3F3AP84243 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0□□□□□ -2.41
H3F3AP84243 RAC1P9-201ENST00000604990 392 ntBASIC0□□□□□ -2.41
H3F3AP84243 AC018714.1-201ENST00000605028 208 ntBASIC0□□□□□ -2.41
H3F3AP84243 LARP7P1-201ENST00000605576 316 ntBASIC0□□□□□ -2.41
H3F3AP84243 AC139792.3-201ENST00000623525 224 ntBASIC0□□□□□ -2.41
H3F3AP84243 MIR6079-201ENST00000635807 62 ntBASIC0□□□□□ -2.41
H3F3AP84243 AC099654.13-201ENST00000639774 207 ntBASIC0□□□□□ -2.41
H3F3AP84243 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
H3F3AP84243 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.01□□□□□ -2.41
H3F3AP84243 RNU6-227P-201ENST00000362865 103 ntBASIC-0.01□□□□□ -2.41
H3F3AP84243 SNORD114-26-201ENST00000363543 72 ntBASIC-0.01□□□□□ -2.41
H3F3AP84243 RNU5F-7P-201ENST00000363696 115 ntBASIC-0.01□□□□□ -2.41
H3F3AP84243 SNORD111-201ENST00000408139 94 ntBASIC-0.01□□□□□ -2.41
H3F3AP84243 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.01□□□□□ -2.41
H3F3AP84243 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.01□□□□□ -2.41
H3F3AP84243 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.01□□□□□ -2.41
H3F3AP84243 MTCO2P3-201ENST00000442543 421 ntBASIC-0.01□□□□□ -2.41
H3F3AP84243 SNRPGP12-201ENST00000449481 213 ntBASIC-0.01□□□□□ -2.41
H3F3AP84243 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.01□□□□□ -2.41
H3F3AP84243 RNU6-344P-201ENST00000516635 111 ntBASIC-0.01□□□□□ -2.41
H3F3AP84243 Vault.3-201ENST00000516676 95 ntBASIC-0.01□□□□□ -2.41
H3F3AP84243 RNU7-28P-201ENST00000516759 62 ntBASIC-0.01□□□□□ -2.41
H3F3AP84243 AC036111.3-201ENST00000526389 112 ntBASIC-0.01□□□□□ -2.41
H3F3AP84243 FRG2DP-202ENST00000566967 323 ntBASIC-0.01□□□□□ -2.41
H3F3AP84243 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
H3F3AP84243 MIR4438-201ENST00000585271 93 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms