Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC022447.4-201ENST00000504053 364 ntBASIC-0.44□□□□□ -2.48
PRKDCP78527 AC093303.1-201ENST00000514549 295 ntBASIC-0.44□□□□□ -2.48
PRKDCP78527 MIR4666A-201ENST00000580160 79 ntBASIC-0.44□□□□□ -2.48
PRKDCP78527 AC246785.4-201ENST00000605374 287 ntBASIC-0.44□□□□□ -2.48
PRKDCP78527 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.44□□□□□ -2.48
PRKDCP78527 Y_RNA.480-201ENST00000384364 102 ntBASIC-0.44□□□□□ -2.48
PRKDCP78527 RNU6-549P-201ENST00000384433 107 ntBASIC-0.44□□□□□ -2.48
PRKDCP78527 RNU6-293P-201ENST00000411259 106 ntBASIC-0.44□□□□□ -2.48
PRKDCP78527 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.44□□□□□ -2.48
PRKDCP78527 AL122001.1-201ENST00000457027 370 ntBASIC-0.44□□□□□ -2.48
PRKDCP78527 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-0.44□□□□□ -2.48
PRKDCP78527 AC023632.1-201ENST00000518463 375 ntBASIC-0.44□□□□□ -2.48
PRKDCP78527 AC138915.2-201ENST00000569776 97 ntBASIC-0.44□□□□□ -2.48
PRKDCP78527 MIR4263-201ENST00000584745 83 ntBASIC-0.44□□□□□ -2.48
PRKDCP78527 AC104458.1-201ENST00000608243 463 ntBASIC-0.44□□□□□ -2.48
PRKDCP78527 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.44□□□□□ -2.48
PRKDCP78527 TCL6_2.1-201ENST00000615162 119 ntBASIC-0.44□□□□□ -2.48
PRKDCP78527 AC104260.1-201ENST00000616660 539 ntBASIC-0.44□□□□□ -2.48
PRKDCP78527 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.44□□□□□ -2.48
PRKDCP78527 SNORA2.2-201ENST00000365473 135 ntBASIC-0.45□□□□□ -2.48
PRKDCP78527 SNORD83B-201ENST00000386745 93 ntBASIC-0.45□□□□□ -2.48
PRKDCP78527 AL590084.2-201ENST00000401481 382 ntBASIC-0.45□□□□□ -2.48
PRKDCP78527 MIR1253-201ENST00000408273 105 ntBASIC-0.45□□□□□ -2.48
PRKDCP78527 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-0.45□□□□□ -2.48
PRKDCP78527 MLLT10P1-201ENST00000418346 262 ntBASIC-0.45□□□□□ -2.48
PRKDCP78527 AC023827.1-201ENST00000569247 97 ntBASIC-0.45□□□□□ -2.48
PRKDCP78527 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.45□□□□□ -2.48
PRKDCP78527 RNU6-652P-201ENST00000365488 107 ntBASIC-0.45□□□□□ -2.48
PRKDCP78527 RNU6-1207P-201ENST00000384343 107 ntBASIC-0.45□□□□□ -2.48
PRKDCP78527 MIR7-1-201ENST00000384871 110 ntBASIC-0.45□□□□□ -2.48
PRKDCP78527 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.45□□□□□ -2.48
PRKDCP78527 HLA-S-202ENST00000425174 53 ntBASIC-0.45□□□□□ -2.48
PRKDCP78527 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.45□□□□□ -2.48
PRKDCP78527 AC091959.1-201ENST00000495857 238 ntBASIC-0.45□□□□□ -2.48
PRKDCP78527 AC010468.3-201ENST00000508225 458 ntBASIC-0.45□□□□□ -2.48
PRKDCP78527 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-0.45□□□□□ -2.48
PRKDCP78527 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC-0.45□□□□□ -2.48
PRKDCP78527 AP002360.4-201ENST00000606980 481 ntBASIC-0.45□□□□□ -2.48
PRKDCP78527 AL359547.2-201ENST00000615810 418 ntBASIC-0.45□□□□□ -2.48
PRKDCP78527 CDR1-202ENST00000625883 1485 ntBASIC-0.45□□□□□ -2.48
PRKDCP78527 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.45□□□□□ -2.48
PRKDCP78527 MIR204-201ENST00000385200 110 ntBASIC-0.45□□□□□ -2.48
PRKDCP78527 RNU4-46P-201ENST00000410818 138 ntBASIC-0.45□□□□□ -2.48
PRKDCP78527 RNU6-448P-201ENST00000517052 107 ntBASIC-0.45□□□□□ -2.48
PRKDCP78527 FRG1KP-201ENST00000623592 341 ntBASIC-0.45□□□□□ -2.48
PRKDCP78527 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-0.45□□□□□ -2.48
PRKDCP78527 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.45□□□□□ -2.48
PRKDCP78527 RNY4P28-201ENST00000365281 93 ntBASIC-0.45□□□□□ -2.48
PRKDCP78527 AC125232.2-201ENST00000592457 143 ntBASIC-0.45□□□□□ -2.48
PRKDCP78527 MIR7844-201ENST00000616161 122 ntBASIC-0.45□□□□□ -2.48
PRKDCP78527 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.45□□□□□ -2.48
PRKDCP78527 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.46□□□□□ -2.48
PRKDCP78527 RNU6-369P-201ENST00000362515 102 ntBASIC-0.46□□□□□ -2.48
PRKDCP78527 MIR196A1-201ENST00000388006 70 ntBASIC-0.46□□□□□ -2.48
PRKDCP78527 SNORA26-201ENST00000391286 122 ntBASIC-0.46□□□□□ -2.48
PRKDCP78527 AL079342.2-201ENST00000403367 482 ntBASIC-0.46□□□□□ -2.48
PRKDCP78527 AC245047.3-201ENST00000429428 127 ntBASIC-0.46□□□□□ -2.48
PRKDCP78527 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.46□□□□□ -2.48
PRKDCP78527 AP001189.2-201ENST00000527320 189 ntBASIC-0.46□□□□□ -2.48
PRKDCP78527 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.46□□□□□ -2.48
PRKDCP78527 AC078795.2-201ENST00000602835 1252 ntBASIC-0.46□□□□□ -2.48
PRKDCP78527 AL136221.1-201ENST00000621449 509 ntBASIC-0.46□□□□□ -2.48
PRKDCP78527 RNU6-934P-201ENST00000365154 107 ntBASIC-0.46□□□□□ -2.48
PRKDCP78527 USP9YP11-201ENST00000427537 717 ntBASIC-0.46□□□□□ -2.48
PRKDCP78527 MED13P1-201ENST00000428342 171 ntBASIC-0.46□□□□□ -2.48
PRKDCP78527 MTND4P32-201ENST00000437189 1237 ntBASIC-0.46□□□□□ -2.48
PRKDCP78527 RPL21P9-201ENST00000556149 474 ntBASIC-0.46□□□□□ -2.48
PRKDCP78527 AL929325.1-201ENST00000603096 117 ntBASIC-0.46□□□□□ -2.48
PRKDCP78527 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.46□□□□□ -2.48
PRKDCP78527 SNORD100-201ENST00000408573 76 ntBASIC-0.46□□□□□ -2.48
PRKDCP78527 AC090960.1-201ENST00000421072 306 ntBASIC-0.46□□□□□ -2.48
PRKDCP78527 DPRXP1-201ENST00000426312 460 ntBASIC-0.46□□□□□ -2.48
PRKDCP78527 ZNF886P-201ENST00000450781 723 ntBASIC-0.46□□□□□ -2.48
PRKDCP78527 AL163973.1-201ENST00000484753 577 ntBASIC-0.46□□□□□ -2.48
PRKDCP78527 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.46□□□□□ -2.48
PRKDCP78527 MIR4432-201ENST00000581823 84 ntBASIC-0.46□□□□□ -2.48
PRKDCP78527 AC022217.4-201ENST00000604389 163 ntBASIC-0.46□□□□□ -2.48
PRKDCP78527 AC068792.1-201ENST00000621354 417 ntBASIC-0.46□□□□□ -2.48
PRKDCP78527 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-0.46□□□□□ -2.48
PRKDCP78527 RNU1-76P-201ENST00000362903 159 ntBASIC-0.47□□□□□ -2.48
PRKDCP78527 RNU6-216P-201ENST00000363282 104 ntBASIC-0.47□□□□□ -2.48
PRKDCP78527 RNU6-97P-201ENST00000363387 104 ntBASIC-0.47□□□□□ -2.48
PRKDCP78527 SNORA27.3-201ENST00000364937 134 ntBASIC-0.47□□□□□ -2.48
PRKDCP78527 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.47□□□□□ -2.48
PRKDCP78527 COX7BP2-201ENST00000437976 242 ntBASIC-0.47□□□□□ -2.48
PRKDCP78527 RNU7-12P-201ENST00000516030 62 ntBASIC-0.47□□□□□ -2.48
PRKDCP78527 SNORA27.4-201ENST00000516650 95 ntBASIC-0.47□□□□□ -2.48
PRKDCP78527 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-0.47□□□□□ -2.48
PRKDCP78527 MTCO2P33-201ENST00000402100 465 ntBASIC-0.47□□□□□ -2.48
PRKDCP78527 AL136310.1-201ENST00000404926 654 ntBASIC-0.47□□□□□ -2.48
PRKDCP78527 AC010154.1-201ENST00000425857 269 ntBASIC-0.47□□□□□ -2.48
PRKDCP78527 RPL39P36-201ENST00000490784 156 ntBASIC-0.47□□□□□ -2.48
PRKDCP78527 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.47□□□□□ -2.48
PRKDCP78527 RNU6-885P-201ENST00000516607 104 ntBASIC-0.47□□□□□ -2.48
PRKDCP78527 RNU7-156P-201ENST00000517214 74 ntBASIC-0.47□□□□□ -2.48
PRKDCP78527 AC021451.1-201ENST00000523498 1129 ntBASIC-0.47□□□□□ -2.48
PRKDCP78527 LRRC6P1-201ENST00000532188 885 ntBASIC-0.47□□□□□ -2.48
PRKDCP78527 MIR4804-201ENST00000581683 73 ntBASIC-0.47□□□□□ -2.48
PRKDCP78527 SNORD98-201ENST00000636377 67 ntBASIC-0.47□□□□□ -2.48
PRKDCP78527 RNU6-417P-201ENST00000384712 107 ntBASIC-0.47□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 268.1 ms