Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC098679.4-201ENST00000624241 654 ntBASIC-0.61□□□□□ -2.51
UBA52P62987 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.61□□□□□ -2.51
UBA52P62987 MIRLET7C-201ENST00000362160 84 ntBASIC-0.62□□□□□ -2.51
UBA52P62987 SNORA36.1-201ENST00000363424 132 ntBASIC-0.62□□□□□ -2.51
UBA52P62987 snoZ40.1-201ENST00000364540 72 ntBASIC-0.62□□□□□ -2.51
UBA52P62987 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.62□□□□□ -2.51
UBA52P62987 RNU5E-6P-201ENST00000365574 115 ntBASIC-0.62□□□□□ -2.51
UBA52P62987 SNORA2B-201ENST00000384583 137 ntBASIC-0.62□□□□□ -2.51
UBA52P62987 MIR454-201ENST00000390180 115 ntBASIC-0.62□□□□□ -2.51
UBA52P62987 RNU6-269P-201ENST00000391077 97 ntBASIC-0.62□□□□□ -2.51
UBA52P62987 RNA5SP95-201ENST00000410319 137 ntBASIC-0.62□□□□□ -2.51
UBA52P62987 MTCO1P17-201ENST00000411522 491 ntBASIC-0.62□□□□□ -2.51
UBA52P62987 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.62□□□□□ -2.51
UBA52P62987 RNU7-56P-201ENST00000458744 62 ntBASIC-0.62□□□□□ -2.51
UBA52P62987 RNU7-159P-201ENST00000459284 62 ntBASIC-0.62□□□□□ -2.51
UBA52P62987 AC006157.1-201ENST00000611750 366 ntBASIC-0.62□□□□□ -2.51
UBA52P62987 AP002782.1-201ENST00000623107 614 ntBASIC-0.62□□□□□ -2.51
UBA52P62987 SNORD75.1-201ENST00000408373 60 ntBASIC-0.63□□□□□ -2.51
UBA52P62987 SNORD100-201ENST00000408573 76 ntBASIC-0.63□□□□□ -2.51
UBA52P62987 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-0.63□□□□□ -2.51
UBA52P62987 DEFB130D-201ENST00000426866 237 ntBASIC-0.63□□□□□ -2.51
UBA52P62987 AL133396.1-201ENST00000432048 687 ntBASIC-0.63□□□□□ -2.51
UBA52P62987 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-0.63□□□□□ -2.51
UBA52P62987 MTCO1P27-201ENST00000448269 226 ntBASIC-0.63□□□□□ -2.51
UBA52P62987 SNORD126-201ENST00000459475 77 ntBASIC-0.63□□□□□ -2.51
UBA52P62987 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.63□□□□□ -2.51
UBA52P62987 RNU7-12P-201ENST00000516030 62 ntBASIC-0.63□□□□□ -2.51
UBA52P62987 RNU2-46P-201ENST00000517038 113 ntBASIC-0.63□□□□□ -2.51
UBA52P62987 OR8K2P-201ENST00000524645 927 ntBASIC-0.63□□□□□ -2.51
UBA52P62987 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.63□□□□□ -2.51
UBA52P62987 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.63□□□□□ -2.51
UBA52P62987 AC069545.1-201ENST00000605671 358 ntBASIC-0.63□□□□□ -2.51
UBA52P62987 AL356596.1-201ENST00000624230 379 ntBASIC-0.63□□□□□ -2.51
UBA52P62987 RNU6-552P-201ENST00000362869 119 ntBASIC-0.64□□□□□ -2.51
UBA52P62987 RNU6-161P-201ENST00000363051 106 ntBASIC-0.64□□□□□ -2.51
UBA52P62987 U3.4-201ENST00000363352 213 ntBASIC-0.64□□□□□ -2.51
UBA52P62987 MIR892B-201ENST00000401279 77 ntBASIC-0.64□□□□□ -2.51
UBA52P62987 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.64□□□□□ -2.51
UBA52P62987 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.64□□□□□ -2.51
UBA52P62987 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-0.64□□□□□ -2.51
UBA52P62987 AC025647.1-201ENST00000517879 253 ntBASIC-0.64□□□□□ -2.51
UBA52P62987 AL445435.1-201ENST00000604232 665 ntBASIC-0.64□□□□□ -2.51
UBA52P62987 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.64□□□□□ -2.51
UBA52P62987 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.64□□□□□ -2.51
UBA52P62987 AL008636.1-201ENST00000625038 1018 ntBASIC-0.64□□□□□ -2.51
UBA52P62987 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.65□□□□□ -2.51
UBA52P62987 SNORD114-12-201ENST00000365400 75 ntBASIC-0.65□□□□□ -2.51
UBA52P62987 RNU6-613P-201ENST00000410412 108 ntBASIC-0.65□□□□□ -2.51
UBA52P62987 RNU6-1245P-201ENST00000411130 106 ntBASIC-0.65□□□□□ -2.51
UBA52P62987 RNU6-293P-201ENST00000411259 106 ntBASIC-0.65□□□□□ -2.51
UBA52P62987 ZNF885P-201ENST00000420174 1098 ntBASIC-0.65□□□□□ -2.51
UBA52P62987 MTND4LP7-201ENST00000431728 294 ntBASIC-0.65□□□□□ -2.51
UBA52P62987 RPL23AP30-201ENST00000432419 501 ntBASIC-0.65□□□□□ -2.51
UBA52P62987 HSFY5P-201ENST00000453726 309 ntBASIC-0.65□□□□□ -2.51
UBA52P62987 RNU6-782P-201ENST00000516852 104 ntBASIC-0.65□□□□□ -2.51
UBA52P62987 AC027288.2-201ENST00000553028 243 ntBASIC-0.65□□□□□ -2.51
UBA52P62987 FTX_2.1-201ENST00000618816 94 ntBASIC-0.65□□□□□ -2.51
UBA52P62987 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.66□□□□□ -2.52
UBA52P62987 RNU6-960P-201ENST00000364056 120 ntBASIC-0.66□□□□□ -2.52
UBA52P62987 SNORA36A-201ENST00000384221 132 ntBASIC-0.66□□□□□ -2.52
UBA52P62987 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.66□□□□□ -2.52
UBA52P62987 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.66□□□□□ -2.52
UBA52P62987 MTATP6P23-201ENST00000440153 476 ntBASIC-0.66□□□□□ -2.52
UBA52P62987 AC069271.1-201ENST00000445577 156 ntBASIC-0.66□□□□□ -2.52
UBA52P62987 AC016632.1-201ENST00000503994 196 ntBASIC-0.66□□□□□ -2.52
UBA52P62987 RNU7-99P-201ENST00000516271 62 ntBASIC-0.66□□□□□ -2.52
UBA52P62987 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.66□□□□□ -2.52
UBA52P62987 MIR4804-201ENST00000581683 73 ntBASIC-0.66□□□□□ -2.52
UBA52P62987 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.66□□□□□ -2.52
UBA52P62987 AL670379.3-201ENST00000605040 251 ntBASIC-0.66□□□□□ -2.52
UBA52P62987 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.66□□□□□ -2.52
UBA52P62987 RNA5SP300-201ENST00000391197 107 ntBASIC-0.67□□□□□ -2.52
UBA52P62987 MIR208B-201ENST00000401172 77 ntBASIC-0.67□□□□□ -2.52
UBA52P62987 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.67□□□□□ -2.52
UBA52P62987 AC007327.1-201ENST00000447461 264 ntBASIC-0.67□□□□□ -2.52
UBA52P62987 AC010486.2-201ENST00000505572 483 ntBASIC-0.67□□□□□ -2.52
UBA52P62987 RNU7-129P-201ENST00000516128 62 ntBASIC-0.67□□□□□ -2.52
UBA52P62987 RNU6-977P-201ENST00000516411 103 ntBASIC-0.67□□□□□ -2.52
UBA52P62987 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-0.67□□□□□ -2.52
UBA52P62987 MRPS36P4-201ENST00000534436 298 ntBASIC-0.67□□□□□ -2.52
UBA52P62987 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-0.67□□□□□ -2.52
UBA52P62987 MIR5708-201ENST00000579723 85 ntBASIC-0.67□□□□□ -2.52
UBA52P62987 VN1R87P-201ENST00000596706 487 ntBASIC-0.67□□□□□ -2.52
UBA52P62987 RNA5SP48-201ENST00000363969 126 ntBASIC-0.68□□□□□ -2.52
UBA52P62987 RNU6-371P-201ENST00000364283 108 ntBASIC-0.68□□□□□ -2.52
UBA52P62987 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.68□□□□□ -2.52
UBA52P62987 AC004866.1-201ENST00000411748 78 ntBASIC-0.68□□□□□ -2.52
UBA52P62987 EEF1A1P40-201ENST00000412883 573 ntBASIC-0.68□□□□□ -2.52
UBA52P62987 TIMM9P2-201ENST00000419324 266 ntBASIC-0.68□□□□□ -2.52
UBA52P62987 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.68□□□□□ -2.52
UBA52P62987 RNU7-94P-201ENST00000459576 63 ntBASIC-0.68□□□□□ -2.52
UBA52P62987 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.68□□□□□ -2.52
UBA52P62987 AP001372.4-201ENST00000524889 472 ntBASIC-0.68□□□□□ -2.52
UBA52P62987 RNY1P9-201ENST00000532431 109 ntBASIC-0.68□□□□□ -2.52
UBA52P62987 AC013828.2-201ENST00000532487 235 ntBASIC-0.68□□□□□ -2.52
UBA52P62987 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-0.68□□□□□ -2.52
UBA52P62987 ZNF92P2-201ENST00000600543 1059 ntBASIC-0.68□□□□□ -2.52
UBA52P62987 AC011921.3-201ENST00000605540 361 ntBASIC-0.68□□□□□ -2.52
UBA52P62987 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-0.68□□□□□ -2.52
UBA52P62987 AL359547.2-201ENST00000615810 418 ntBASIC-0.68□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms