Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AC009237.7-201ENST00000447357 229 ntBASIC3.13□□□□□ -1.91
HERVK_113P62684 RPL31P41-201ENST00000477967 372 ntBASIC3.13□□□□□ -1.91
HERVK_113P62684 AC140059.1-201ENST00000489238 361 ntBASIC3.13□□□□□ -1.91
HERVK_113P62684 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.13□□□□□ -1.91
HERVK_113P62684 AC008413.1-201ENST00000511864 177 ntBASIC3.13□□□□□ -1.91
HERVK_113P62684 RNA5SP112-201ENST00000515937 99 ntBASIC3.13□□□□□ -1.91
HERVK_113P62684 RNU1-41P-201ENST00000516161 162 ntBASIC3.13□□□□□ -1.91
HERVK_113P62684 RNU1-48P-201ENST00000516400 162 ntBASIC3.13□□□□□ -1.91
HERVK_113P62684 AC024405.2-202ENST00000532731 184 ntBASIC3.13□□□□□ -1.91
HERVK_113P62684 AP002001.1-203ENST00000534002 267 ntBASIC3.13□□□□□ -1.91
HERVK_113P62684 AC004792.1-201ENST00000614523 137 ntBASIC3.13□□□□□ -1.91
HERVK_113P62684 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HERVK_113P62684 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.13□□□□□ -1.91
HERVK_113P62684 AC108206.1-201ENST00000570186 4159 ntBASIC3.12□□□□□ -1.91
HERVK_113P62684 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
HERVK_113P62684 Y_RNA.150-201ENST00000363562 102 ntBASIC3.12□□□□□ -1.91
HERVK_113P62684 RNU6-1083P-201ENST00000384022 107 ntBASIC3.12□□□□□ -1.91
HERVK_113P62684 RNU6-662P-201ENST00000384253 104 ntBASIC3.12□□□□□ -1.91
HERVK_113P62684 RNU6-1289P-201ENST00000384431 106 ntBASIC3.12□□□□□ -1.91
HERVK_113P62684 MIR887-201ENST00000401258 79 ntBASIC3.12□□□□□ -1.91
HERVK_113P62684 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.12□□□□□ -1.91
HERVK_113P62684 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.12□□□□□ -1.91
HERVK_113P62684 SNORD116-28-201ENST00000516123 91 ntBASIC3.12□□□□□ -1.91
HERVK_113P62684 RNU6-344P-201ENST00000516635 111 ntBASIC3.12□□□□□ -1.91
HERVK_113P62684 SNORA27.4-201ENST00000516650 95 ntBASIC3.12□□□□□ -1.91
HERVK_113P62684 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.12□□□□□ -1.91
HERVK_113P62684 AC090115.4-201ENST00000609970 188 ntBASIC3.12□□□□□ -1.91
HERVK_113P62684 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.12□□□□□ -1.91
HERVK_113P62684 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
HERVK_113P62684 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
HERVK_113P62684 RNU4-80P-201ENST00000363200 141 ntBASIC3.11□□□□□ -1.91
HERVK_113P62684 Y_RNA.122-201ENST00000363331 96 ntBASIC3.11□□□□□ -1.91
HERVK_113P62684 Y_RNA.136-201ENST00000363444 102 ntBASIC3.11□□□□□ -1.91
HERVK_113P62684 RNU6-324P-201ENST00000363957 106 ntBASIC3.11□□□□□ -1.91
HERVK_113P62684 Y_RNA.270-201ENST00000364693 104 ntBASIC3.11□□□□□ -1.91
HERVK_113P62684 Y_RNA.292-201ENST00000364904 97 ntBASIC3.11□□□□□ -1.91
HERVK_113P62684 SNORD88.1-201ENST00000408684 91 ntBASIC3.11□□□□□ -1.91
HERVK_113P62684 Y_RNA.644-201ENST00000459006 113 ntBASIC3.11□□□□□ -1.91
HERVK_113P62684 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.11□□□□□ -1.91
HERVK_113P62684 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.11□□□□□ -1.91
HERVK_113P62684 Y_RNA.674-201ENST00000516362 113 ntBASIC3.11□□□□□ -1.91
HERVK_113P62684 AC006380.1-201ENST00000603598 186 ntBASIC3.11□□□□□ -1.91
HERVK_113P62684 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.11□□□□□ -1.91
HERVK_113P62684 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.11□□□□□ -1.91
HERVK_113P62684 AC068205.3-201ENST00000636385 468 ntBASIC3.11□□□□□ -1.91
HERVK_113P62684 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.11□□□□□ -1.91
HERVK_113P62684 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
HERVK_113P62684 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HERVK_113P62684 MIR26A1-201ENST00000362205 77 ntBASIC3.1□□□□□ -1.91
HERVK_113P62684 MIR411-201ENST00000362239 96 ntBASIC3.1□□□□□ -1.91
HERVK_113P62684 RNA5SP432-201ENST00000362480 116 ntBASIC3.1□□□□□ -1.91
HERVK_113P62684 RNU6-1264P-201ENST00000383891 107 ntBASIC3.1□□□□□ -1.91
HERVK_113P62684 SNORA70B-201ENST00000384210 135 ntBASIC3.1□□□□□ -1.91
HERVK_113P62684 AL603908.1-201ENST00000406098 201 ntBASIC3.1□□□□□ -1.91
HERVK_113P62684 RNU2-54P-201ENST00000410299 190 ntBASIC3.1□□□□□ -1.91
HERVK_113P62684 Y_RNA.626-201ENST00000411288 95 ntBASIC3.1□□□□□ -1.91
HERVK_113P62684 AC009963.1-201ENST00000417265 157 ntBASIC3.1□□□□□ -1.91
HERVK_113P62684 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.1□□□□□ -1.91
HERVK_113P62684 SUMO1P3-201ENST00000439961 304 ntBASIC3.1□□□□□ -1.91
HERVK_113P62684 RPL23AP58-201ENST00000440453 469 ntBASIC3.1□□□□□ -1.91
HERVK_113P62684 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.1□□□□□ -1.91
HERVK_113P62684 AC003982.1-202ENST00000469928 248 ntBASIC3.1□□□□□ -1.91
HERVK_113P62684 RN7SL297P-201ENST00000483161 293 ntBASIC3.1□□□□□ -1.91
HERVK_113P62684 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.1□□□□□ -1.91
HERVK_113P62684 DEFB117-201ENST00000602356 141 ntBASIC3.1□□□□□ -1.91
HERVK_113P62684 AC005828.6-201ENST00000606610 232 ntBASIC3.1□□□□□ -1.91
HERVK_113P62684 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.1□□□□□ -1.91
HERVK_113P62684 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.1□□□□□ -1.91
HERVK_113P62684 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HERVK_113P62684 RNU6-486P-201ENST00000363116 107 ntBASIC3.09□□□□□ -1.91
HERVK_113P62684 Y_RNA.597-201ENST00000410463 100 ntBASIC3.09□□□□□ -1.91
HERVK_113P62684 RNU6-1199P-201ENST00000411249 104 ntBASIC3.09□□□□□ -1.91
HERVK_113P62684 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.09□□□□□ -1.91
HERVK_113P62684 YWHAEP4-201ENST00000505390 198 ntBASIC3.09□□□□□ -1.91
HERVK_113P62684 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.09□□□□□ -1.91
HERVK_113P62684 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.09□□□□□ -1.91
HERVK_113P62684 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.09□□□□□ -1.91
HERVK_113P62684 AC023043.3-201ENST00000593113 385 ntBASIC3.09□□□□□ -1.91
HERVK_113P62684 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.09□□□□□ -1.91
HERVK_113P62684 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
HERVK_113P62684 FAM35CP-201ENST00000554755 2470 ntBASIC3.08□□□□□ -1.92
HERVK_113P62684 UBE2WP1-201ENST00000362030 340 ntBASIC3.08□□□□□ -1.92
HERVK_113P62684 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
HERVK_113P62684 MIR29B2-201ENST00000385055 81 ntBASIC3.08□□□□□ -1.92
HERVK_113P62684 MTND2P29-201ENST00000438595 412 ntBASIC3.08□□□□□ -1.92
HERVK_113P62684 AP002392.1-201ENST00000537692 208 ntBASIC3.08□□□□□ -1.92
HERVK_113P62684 SNORD53-201ENST00000579969 78 ntBASIC3.08□□□□□ -1.92
HERVK_113P62684 FTX_2.1-201ENST00000618816 94 ntBASIC3.08□□□□□ -1.92
HERVK_113P62684 AC064859.1-201ENST00000624741 174 ntBASIC3.08□□□□□ -1.92
HERVK_113P62684 AC092435.3-201ENST00000565538 3654 ntBASIC3.08□□□□□ -1.92
HERVK_113P62684 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.08□□□□□ -1.92
HERVK_113P62684 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.07□□□□□ -1.92
HERVK_113P62684 MAPK10-266ENST00000641066 6555 ntBASIC3.07□□□□□ -1.92
HERVK_113P62684 RNU6-1305P-201ENST00000364353 104 ntBASIC3.07□□□□□ -1.92
HERVK_113P62684 Y_RNA.329-201ENST00000365209 107 ntBASIC3.07□□□□□ -1.92
HERVK_113P62684 RNY4P28-201ENST00000365281 93 ntBASIC3.07□□□□□ -1.92
HERVK_113P62684 SNORD21-201ENST00000383953 95 ntBASIC3.07□□□□□ -1.92
HERVK_113P62684 RNA5SP504-201ENST00000410676 117 ntBASIC3.07□□□□□ -1.92
HERVK_113P62684 Y_RNA.638-201ENST00000459374 113 ntBASIC3.07□□□□□ -1.92
HERVK_113P62684 MIR449C-201ENST00000516047 92 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms