Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 RNU6-227P-201ENST00000362865 103 ntBASIC0.03□□□□□ -2.4
AP3S2P59780 RNU4-45P-201ENST00000365469 141 ntBASIC0.03□□□□□ -2.4
AP3S2P59780 AC084290.1-201ENST00000434995 374 ntBASIC0.03□□□□□ -2.4
AP3S2P59780 MTCO2P3-201ENST00000442543 421 ntBASIC0.03□□□□□ -2.4
AP3S2P59780 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.03□□□□□ -2.4
AP3S2P59780 Y_RNA.638-201ENST00000459374 113 ntBASIC0.03□□□□□ -2.4
AP3S2P59780 AC007215.1-201ENST00000464893 276 ntBASIC0.03□□□□□ -2.4
AP3S2P59780 AF186996.7-201ENST00000492781 209 ntBASIC0.03□□□□□ -2.4
AP3S2P59780 AC079140.5-201ENST00000507882 310 ntBASIC0.03□□□□□ -2.4
AP3S2P59780 RNU2-56P-201ENST00000516826 190 ntBASIC0.03□□□□□ -2.4
AP3S2P59780 RNU6-1116P-201ENST00000517269 99 ntBASIC0.03□□□□□ -2.4
AP3S2P59780 AF235103.2-201ENST00000525753 346 ntBASIC0.03□□□□□ -2.4
AP3S2P59780 AC036111.3-201ENST00000526389 112 ntBASIC0.03□□□□□ -2.4
AP3S2P59780 AP003716.2-201ENST00000528260 108 ntBASIC0.03□□□□□ -2.4
AP3S2P59780 AC023157.2-201ENST00000540596 141 ntBASIC0.03□□□□□ -2.4
AP3S2P59780 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.03□□□□□ -2.4
AP3S2P59780 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.03□□□□□ -2.4
AP3S2P59780 MIR4703-201ENST00000577728 79 ntBASIC0.03□□□□□ -2.4
AP3S2P59780 MIR4438-201ENST00000585271 93 ntBASIC0.03□□□□□ -2.4
AP3S2P59780 BNIP3P39-201ENST00000601077 554 ntBASIC0.03□□□□□ -2.4
AP3S2P59780 AC007684.1-201ENST00000609671 477 ntBASIC0.03□□□□□ -2.4
AP3S2P59780 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.03□□□□□ -2.4
AP3S2P59780 uc_338.34-201ENST00000617467 174 ntBASIC0.03□□□□□ -2.4
AP3S2P59780 MIR6079-201ENST00000635807 62 ntBASIC0.03□□□□□ -2.4
AP3S2P59780 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.03□□□□□ -2.4
AP3S2P59780 Y_RNA.4-201ENST00000362333 112 ntBASIC0.02□□□□□ -2.41
AP3S2P59780 SNORD44.1-201ENST00000363202 61 ntBASIC0.02□□□□□ -2.41
AP3S2P59780 RNU6-137P-201ENST00000363680 108 ntBASIC0.02□□□□□ -2.41
AP3S2P59780 SNORD87-201ENST00000364849 89 ntBASIC0.02□□□□□ -2.41
AP3S2P59780 RNU6-1286P-201ENST00000383871 107 ntBASIC0.02□□□□□ -2.41
AP3S2P59780 RNA5SP219-201ENST00000390940 113 ntBASIC0.02□□□□□ -2.41
AP3S2P59780 RNA5SP193-201ENST00000410353 107 ntBASIC0.02□□□□□ -2.41
AP3S2P59780 RNU6-195P-201ENST00000411352 109 ntBASIC0.02□□□□□ -2.41
AP3S2P59780 GPR143P-201ENST00000434155 205 ntBASIC0.02□□□□□ -2.41
AP3S2P59780 AL512286.1-201ENST00000439244 400 ntBASIC0.02□□□□□ -2.41
AP3S2P59780 MTND2P32-201ENST00000521584 1038 ntBASIC0.02□□□□□ -2.41
AP3S2P59780 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.02□□□□□ -2.41
AP3S2P59780 AC137590.2-201ENST00000619709 240 ntBASIC0.02□□□□□ -2.41
AP3S2P59780 MIR924-201ENST00000638017 53 ntBASIC0.02□□□□□ -2.41
AP3S2P59780 MIRLET7C-201ENST00000362160 84 ntBASIC0.01□□□□□ -2.41
AP3S2P59780 RNU6-1266P-201ENST00000362794 105 ntBASIC0.01□□□□□ -2.41
AP3S2P59780 Y_RNA.100-201ENST00000363141 102 ntBASIC0.01□□□□□ -2.41
AP3S2P59780 Y_RNA.123-201ENST00000363338 102 ntBASIC0.01□□□□□ -2.41
AP3S2P59780 RNA5SP62-201ENST00000363457 110 ntBASIC0.01□□□□□ -2.41
AP3S2P59780 Y_RNA.267-201ENST00000364679 109 ntBASIC0.01□□□□□ -2.41
AP3S2P59780 MIR1827-201ENST00000408549 66 ntBASIC0.01□□□□□ -2.41
AP3S2P59780 RNA5SP511-201ENST00000410487 115 ntBASIC0.01□□□□□ -2.41
AP3S2P59780 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.01□□□□□ -2.41
AP3S2P59780 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.01□□□□□ -2.41
AP3S2P59780 SNRPGP12-201ENST00000449481 213 ntBASIC0.01□□□□□ -2.41
AP3S2P59780 snoU109.3-201ENST00000459477 145 ntBASIC0.01□□□□□ -2.41
AP3S2P59780 HMGN2P26-201ENST00000463169 339 ntBASIC0.01□□□□□ -2.41
AP3S2P59780 SNORD27.1-201ENST00000516319 72 ntBASIC0.01□□□□□ -2.41
AP3S2P59780 RNU6-344P-201ENST00000516635 111 ntBASIC0.01□□□□□ -2.41
AP3S2P59780 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
AP3S2P59780 LARP7P1-201ENST00000605576 316 ntBASIC0.01□□□□□ -2.41
AP3S2P59780 AL162730.1-201ENST00000605734 292 ntBASIC0.01□□□□□ -2.41
AP3S2P59780 AC100812.1-201ENST00000607622 580 ntBASIC0.01□□□□□ -2.41
AP3S2P59780 SNORD11B-201ENST00000607707 90 ntBASIC0.01□□□□□ -2.41
AP3S2P59780 AC007671.2-201ENST00000637344 619 ntBASIC0.01□□□□□ -2.41
AP3S2P59780 AC006927.3-201ENST00000638789 384 ntBASIC0.01□□□□□ -2.41
AP3S2P59780 RNY4P34-201ENST00000364779 95 ntBASIC0□□□□□ -2.41
AP3S2P59780 MIR499A-201ENST00000384903 122 ntBASIC0□□□□□ -2.41
AP3S2P59780 RNU6-1106P-201ENST00000390845 107 ntBASIC0□□□□□ -2.41
AP3S2P59780 SNORA40.4-201ENST00000390971 128 ntBASIC0□□□□□ -2.41
AP3S2P59780 MIR450B-201ENST00000401182 78 ntBASIC0□□□□□ -2.41
AP3S2P59780 RNU2-70P-201ENST00000410718 179 ntBASIC0□□□□□ -2.41
AP3S2P59780 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0□□□□□ -2.41
AP3S2P59780 MTND4P4-201ENST00000439033 1366 ntBASIC0□□□□□ -2.41
AP3S2P59780 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0□□□□□ -2.41
AP3S2P59780 AC079781.2-201ENST00000446424 169 ntBASIC0□□□□□ -2.41
AP3S2P59780 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0□□□□□ -2.41
AP3S2P59780 RNU7-41P-201ENST00000515917 61 ntBASIC0□□□□□ -2.41
AP3S2P59780 AL589743.1-201ENST00000551932 2712 ntBASIC0□□□□□ -2.41
AP3S2P59780 AC027288.2-201ENST00000553028 243 ntBASIC0□□□□□ -2.41
AP3S2P59780 MIR4509-3-201ENST00000578671 94 ntBASIC0□□□□□ -2.41
AP3S2P59780 MIR4509-2-201ENST00000583920 94 ntBASIC0□□□□□ -2.41
AP3S2P59780 AC027514.1-201ENST00000588561 1603 ntBASIC0□□□□□ -2.41
AP3S2P59780 Z84480.1-201ENST00000605131 311 ntBASIC0□□□□□ -2.41
AP3S2P59780 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0□□□□□ -2.41
AP3S2P59780 MIR4509-1-201ENST00000618224 94 ntBASIC0□□□□□ -2.41
AP3S2P59780 AL008636.1-201ENST00000625038 1018 ntBASIC0□□□□□ -2.41
AP3S2P59780 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
AP3S2P59780 SNORA1B-201ENST00000362535 133 ntBASIC-0.01□□□□□ -2.41
AP3S2P59780 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.01□□□□□ -2.41
AP3S2P59780 RNU6-42P-201ENST00000384165 107 ntBASIC-0.01□□□□□ -2.41
AP3S2P59780 MIR320B2-201ENST00000408479 138 ntBASIC-0.01□□□□□ -2.41
AP3S2P59780 MIR1185-2-201ENST00000408687 86 ntBASIC-0.01□□□□□ -2.41
AP3S2P59780 MTCO3P10-201ENST00000455912 772 ntBASIC-0.01□□□□□ -2.41
AP3S2P59780 AC105417.1-201ENST00000514691 285 ntBASIC-0.01□□□□□ -2.41
AP3S2P59780 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.01□□□□□ -2.41
AP3S2P59780 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.01□□□□□ -2.41
AP3S2P59780 AC104383.1-201ENST00000530297 370 ntBASIC-0.01□□□□□ -2.41
AP3S2P59780 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC-0.01□□□□□ -2.41
AP3S2P59780 MTCO3P23-201ENST00000561363 289 ntBASIC-0.01□□□□□ -2.41
AP3S2P59780 AC107308.1-201ENST00000615897 301 ntBASIC-0.01□□□□□ -2.41
AP3S2P59780 MTND4P9-201ENST00000507819 1346 ntBASIC-0.02□□□□□ -2.41
AP3S2P59780 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
AP3S2P59780 MIR573-201ENST00000384964 99 ntBASIC-0.02□□□□□ -2.41
AP3S2P59780 SNORD111-201ENST00000408139 94 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms