Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC079382.1-201ENST00000493346 557 ntBASIC-1.78□□□□□ -2.69
CLTCL1P53675 MIR5706-201ENST00000579841 80 ntBASIC-1.78□□□□□ -2.69
CLTCL1P53675 RNU6-364P-201ENST00000384387 107 ntBASIC-1.79□□□□□ -2.7
CLTCL1P53675 U8.16-201ENST00000391279 133 ntBASIC-1.79□□□□□ -2.7
CLTCL1P53675 TRIM60P5Y-201ENST00000413946 574 ntBASIC-1.79□□□□□ -2.7
CLTCL1P53675 RPL37P6-201ENST00000460682 294 ntBASIC-1.79□□□□□ -2.7
CLTCL1P53675 MIR4771-2-201ENST00000577758 74 ntBASIC-1.79□□□□□ -2.7
CLTCL1P53675 MIR4771-1-201ENST00000582617 74 ntBASIC-1.79□□□□□ -2.7
CLTCL1P53675 MIR4676-201ENST00000583078 72 ntBASIC-1.79□□□□□ -2.7
CLTCL1P53675 AC008608.1-201ENST00000603910 127 ntBASIC-1.79□□□□□ -2.7
CLTCL1P53675 AC011374.2-201ENST00000607135 526 ntBASIC-1.79□□□□□ -2.7
CLTCL1P53675 AC091304.10-201ENST00000641554 121 ntBASIC-1.79□□□□□ -2.7
CLTCL1P53675 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.79□□□□□ -2.7
CLTCL1P53675 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.8□□□□□ -2.7
CLTCL1P53675 MT-TY-201ENST00000387409 66 ntBASIC-1.8□□□□□ -2.7
CLTCL1P53675 RNU6-613P-201ENST00000410412 108 ntBASIC-1.8□□□□□ -2.7
CLTCL1P53675 AC106883.1-201ENST00000418805 562 ntBASIC-1.8□□□□□ -2.7
CLTCL1P53675 AC005345.1-201ENST00000431868 217 ntBASIC-1.8□□□□□ -2.7
CLTCL1P53675 AC009237.7-201ENST00000447357 229 ntBASIC-1.8□□□□□ -2.7
CLTCL1P53675 RPS29P27-201ENST00000463711 170 ntBASIC-1.8□□□□□ -2.7
CLTCL1P53675 ZNF971P-201ENST00000562068 1249 ntBASIC-1.8□□□□□ -2.7
CLTCL1P53675 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-1.8□□□□□ -2.7
CLTCL1P53675 VN1R88P-201ENST00000596787 292 ntBASIC-1.8□□□□□ -2.7
CLTCL1P53675 AC105081.1-201ENST00000617727 106 ntBASIC-1.8□□□□□ -2.7
CLTCL1P53675 BX322639.1-202ENST00000423987 2213 ntBASIC-1.8□□□□□ -2.7
CLTCL1P53675 RNU6-1097P-201ENST00000363586 107 ntBASIC-1.8□□□□□ -2.7
CLTCL1P53675 RNU6-580P-201ENST00000365159 107 ntBASIC-1.8□□□□□ -2.7
CLTCL1P53675 MIR520C-201ENST00000385005 87 ntBASIC-1.8□□□□□ -2.7
CLTCL1P53675 MIR802-201ENST00000390235 94 ntBASIC-1.8□□□□□ -2.7
CLTCL1P53675 RNU6-754P-201ENST00000391166 107 ntBASIC-1.8□□□□□ -2.7
CLTCL1P53675 MIR1302-7-201ENST00000408841 72 ntBASIC-1.8□□□□□ -2.7
CLTCL1P53675 AC245047.3-201ENST00000429428 127 ntBASIC-1.8□□□□□ -2.7
CLTCL1P53675 AL365184.2-201ENST00000431139 435 ntBASIC-1.8□□□□□ -2.7
CLTCL1P53675 RNU6-448P-201ENST00000517052 107 ntBASIC-1.8□□□□□ -2.7
CLTCL1P53675 AC009902.1-201ENST00000519351 183 ntBASIC-1.8□□□□□ -2.7
CLTCL1P53675 DEFB130C-202ENST00000530001 230 ntBASIC-1.8□□□□□ -2.7
CLTCL1P53675 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC-1.8□□□□□ -2.7
CLTCL1P53675 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-1.8□□□□□ -2.7
CLTCL1P53675 MIR4752-201ENST00000579672 72 ntBASIC-1.8□□□□□ -2.7
CLTCL1P53675 AC018889.1-201ENST00000605372 397 ntBASIC-1.8□□□□□ -2.7
CLTCL1P53675 RNU4-56P-201ENST00000364700 142 ntBASIC-1.81□□□□□ -2.7
CLTCL1P53675 RNU6-47P-201ENST00000383866 107 ntBASIC-1.81□□□□□ -2.7
CLTCL1P53675 MTCYBP5-201ENST00000423752 1135 ntBASIC-1.81□□□□□ -2.7
CLTCL1P53675 AL500527.2-201ENST00000454105 95 ntBASIC-1.81□□□□□ -2.7
CLTCL1P53675 RNU7-41P-201ENST00000515917 61 ntBASIC-1.81□□□□□ -2.7
CLTCL1P53675 MIR4677-201ENST00000584153 80 ntBASIC-1.81□□□□□ -2.7
CLTCL1P53675 AC012433.1-201ENST00000588916 398 ntBASIC-1.81□□□□□ -2.7
CLTCL1P53675 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.81□□□□□ -2.7
CLTCL1P53675 RNU4-15P-201ENST00000362613 141 ntBASIC-1.82□□□□□ -2.7
CLTCL1P53675 RNU6-1078P-201ENST00000364522 103 ntBASIC-1.82□□□□□ -2.7
CLTCL1P53675 RNU6-424P-201ENST00000384367 105 ntBASIC-1.82□□□□□ -2.7
CLTCL1P53675 SNORA40C-201ENST00000391285 128 ntBASIC-1.82□□□□□ -2.7
CLTCL1P53675 TMSB4XP8-201ENST00000402089 135 ntBASIC-1.82□□□□□ -2.7
CLTCL1P53675 CDK8P2-201ENST00000415020 547 ntBASIC-1.82□□□□□ -2.7
CLTCL1P53675 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-1.82□□□□□ -2.7
CLTCL1P53675 RNU6-469P-201ENST00000516253 101 ntBASIC-1.82□□□□□ -2.7
CLTCL1P53675 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-1.82□□□□□ -2.7
CLTCL1P53675 AC020891.4-201ENST00000605745 93 ntBASIC-1.82□□□□□ -2.7
CLTCL1P53675 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-1.82□□□□□ -2.7
CLTCL1P53675 AC005332.6-201ENST00000613178 446 ntBASIC-1.82□□□□□ -2.7
CLTCL1P53675 MIR7844-201ENST00000616161 122 ntBASIC-1.82□□□□□ -2.7
CLTCL1P53675 AP000568.1-201ENST00000282964 442 ntBASIC-1.83□□□□□ -2.7
CLTCL1P53675 RNU6-637P-201ENST00000384050 107 ntBASIC-1.83□□□□□ -2.7
CLTCL1P53675 RNU6-447P-201ENST00000410293 104 ntBASIC-1.83□□□□□ -2.7
CLTCL1P53675 RNU6-1118P-201ENST00000410382 104 ntBASIC-1.83□□□□□ -2.7
CLTCL1P53675 RNU6-1076P-201ENST00000410397 104 ntBASIC-1.83□□□□□ -2.7
CLTCL1P53675 RNU6-355P-201ENST00000410427 104 ntBASIC-1.83□□□□□ -2.7
CLTCL1P53675 RNU6-791P-201ENST00000410467 104 ntBASIC-1.83□□□□□ -2.7
CLTCL1P53675 RNU6-1100P-201ENST00000410691 104 ntBASIC-1.83□□□□□ -2.7
CLTCL1P53675 RNU6-860P-201ENST00000410860 104 ntBASIC-1.83□□□□□ -2.7
CLTCL1P53675 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.83□□□□□ -2.7
CLTCL1P53675 RNU6-1217P-201ENST00000411276 104 ntBASIC-1.83□□□□□ -2.7
CLTCL1P53675 RNU6-785P-201ENST00000411324 104 ntBASIC-1.83□□□□□ -2.7
CLTCL1P53675 AL122001.1-201ENST00000457027 370 ntBASIC-1.83□□□□□ -2.7
CLTCL1P53675 SNORA18.4-201ENST00000516440 124 ntBASIC-1.83□□□□□ -2.7
CLTCL1P53675 AC121247.2-201ENST00000604776 136 ntBASIC-1.83□□□□□ -2.7
CLTCL1P53675 U6.90-201ENST00000614007 104 ntBASIC-1.83□□□□□ -2.7
CLTCL1P53675 U6.70-201ENST00000620287 104 ntBASIC-1.83□□□□□ -2.7
CLTCL1P53675 SNORD116-20-201ENST00000384529 92 ntBASIC-1.84□□□□□ -2.7
CLTCL1P53675 MRPL42P3-201ENST00000401492 326 ntBASIC-1.84□□□□□ -2.7
CLTCL1P53675 RNU7-102P-201ENST00000458948 62 ntBASIC-1.84□□□□□ -2.7
CLTCL1P53675 RNA5SP216-201ENST00000516111 123 ntBASIC-1.84□□□□□ -2.7
CLTCL1P53675 RNU5F-4P-201ENST00000516581 114 ntBASIC-1.84□□□□□ -2.7
CLTCL1P53675 RNU6-1098P-201ENST00000516772 96 ntBASIC-1.84□□□□□ -2.7
CLTCL1P53675 BNIP3P24-201ENST00000593398 557 ntBASIC-1.84□□□□□ -2.7
CLTCL1P53675 Y_RNA.490-201ENST00000384413 102 ntBASIC-1.84□□□□□ -2.7
CLTCL1P53675 RNU6-932P-201ENST00000391108 106 ntBASIC-1.84□□□□□ -2.7
CLTCL1P53675 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-1.84□□□□□ -2.7
CLTCL1P53675 AC020550.1-201ENST00000447385 163 ntBASIC-1.84□□□□□ -2.7
CLTCL1P53675 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.84□□□□□ -2.7
CLTCL1P53675 AC010468.3-201ENST00000508225 458 ntBASIC-1.84□□□□□ -2.7
CLTCL1P53675 RNU6-504P-201ENST00000516568 104 ntBASIC-1.84□□□□□ -2.7
CLTCL1P53675 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.84□□□□□ -2.7
CLTCL1P53675 AC090617.3-201ENST00000573670 475 ntBASIC-1.84□□□□□ -2.7
CLTCL1P53675 FGF7P1-201ENST00000582820 288 ntBASIC-1.84□□□□□ -2.7
CLTCL1P53675 AC010525.2-201ENST00000590920 195 ntBASIC-1.84□□□□□ -2.7
CLTCL1P53675 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.84□□□□□ -2.7
CLTCL1P53675 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.84□□□□□ -2.7
CLTCL1P53675 AC092104.1-201ENST00000497346 1441 ntBASIC-1.85□□□□□ -2.7
CLTCL1P53675 Y_RNA.287-201ENST00000364853 94 ntBASIC-1.85□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms