Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 SRRM1P2-201ENST00000464531 1192 ntBASIC1.02□□□□□ -2.25
ACLYP53396 BET1P1-201ENST00000482276 359 ntBASIC1.02□□□□□ -2.25
ACLYP53396 MTCO1P29-201ENST00000496868 288 ntBASIC1.02□□□□□ -2.25
ACLYP53396 RNU6-344P-201ENST00000516635 111 ntBASIC1.02□□□□□ -2.25
ACLYP53396 RNA5SP404-201ENST00000517118 132 ntBASIC1.02□□□□□ -2.25
ACLYP53396 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.02□□□□□ -2.25
ACLYP53396 TPRKBP2-201ENST00000565969 475 ntBASIC1.02□□□□□ -2.25
ACLYP53396 CPDP1-201ENST00000579660 283 ntBASIC1.02□□□□□ -2.25
ACLYP53396 AP001330.5-201ENST00000607176 411 ntBASIC1.02□□□□□ -2.25
ACLYP53396 AC092807.2-201ENST00000609367 243 ntBASIC1.02□□□□□ -2.25
ACLYP53396 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
ACLYP53396 SNORA22-201ENST00000383907 134 ntBASIC1.01□□□□□ -2.25
ACLYP53396 RNU6-933P-201ENST00000384424 107 ntBASIC1.01□□□□□ -2.25
ACLYP53396 SNORA22C-201ENST00000384614 134 ntBASIC1.01□□□□□ -2.25
ACLYP53396 MTCO2P16-201ENST00000436962 677 ntBASIC1.01□□□□□ -2.25
ACLYP53396 AL606517.2-201ENST00000442855 241 ntBASIC1.01□□□□□ -2.25
ACLYP53396 RNU6-1208P-201ENST00000459588 107 ntBASIC1.01□□□□□ -2.25
ACLYP53396 AC083798.1-201ENST00000472671 131 ntBASIC1.01□□□□□ -2.25
ACLYP53396 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.01□□□□□ -2.25
ACLYP53396 AC091885.1-201ENST00000506658 268 ntBASIC1.01□□□□□ -2.25
ACLYP53396 AC091133.4-201ENST00000511142 308 ntBASIC1.01□□□□□ -2.25
ACLYP53396 RNU1-117P-201ENST00000517041 158 ntBASIC1.01□□□□□ -2.25
ACLYP53396 AC025647.1-201ENST00000517879 253 ntBASIC1.01□□□□□ -2.25
ACLYP53396 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.01□□□□□ -2.25
ACLYP53396 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.01□□□□□ -2.25
ACLYP53396 ZNF204P-201ENST00000416749 2397 ntBASIC1.01□□□□□ -2.25
ACLYP53396 SNORA25-201ENST00000384384 134 ntBASIC1□□□□□ -2.25
ACLYP53396 RNU6-1031P-201ENST00000384773 107 ntBASIC1□□□□□ -2.25
ACLYP53396 MIR487A-201ENST00000385009 80 ntBASIC1□□□□□ -2.25
ACLYP53396 RNU6-261P-201ENST00000459506 102 ntBASIC1□□□□□ -2.25
ACLYP53396 RNU6-221P-201ENST00000459541 99 ntBASIC1□□□□□ -2.25
ACLYP53396 RNU1-142P-201ENST00000516682 145 ntBASIC1□□□□□ -2.25
ACLYP53396 SUMO2P16-201ENST00000519475 264 ntBASIC1□□□□□ -2.25
ACLYP53396 AC100830.2-201ENST00000581636 240 ntBASIC1□□□□□ -2.25
ACLYP53396 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1□□□□□ -2.25
ACLYP53396 AC017083.3-201ENST00000609955 700 ntBASIC1□□□□□ -2.25
ACLYP53396 AL359075.3-201ENST00000613288 217 ntBASIC1□□□□□ -2.25
ACLYP53396 Six3os1_7.1-201ENST00000621512 201 ntBASIC1□□□□□ -2.25
ACLYP53396 AC027335.2-201ENST00000624030 375 ntBASIC1□□□□□ -2.25
ACLYP53396 AC068647.2-201ENST00000637380 353 ntBASIC1□□□□□ -2.25
ACLYP53396 U6.108-201ENST00000637764 58 ntBASIC1□□□□□ -2.25
ACLYP53396 RNU6-1240P-201ENST00000365155 104 ntBASIC0.99□□□□□ -2.25
ACLYP53396 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
ACLYP53396 EIF4E2P1-201ENST00000393781 255 ntBASIC0.99□□□□□ -2.25
ACLYP53396 AC010154.1-201ENST00000425857 269 ntBASIC0.99□□□□□ -2.25
ACLYP53396 RPL39P38-201ENST00000467018 153 ntBASIC0.99□□□□□ -2.25
ACLYP53396 RPL23AP75-201ENST00000491601 451 ntBASIC0.99□□□□□ -2.25
ACLYP53396 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.99□□□□□ -2.25
ACLYP53396 SNORA31.10-201ENST00000516482 106 ntBASIC0.99□□□□□ -2.25
ACLYP53396 AC104383.1-201ENST00000530297 370 ntBASIC0.99□□□□□ -2.25
ACLYP53396 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
ACLYP53396 AL022345.2-201ENST00000606307 135 ntBASIC0.99□□□□□ -2.25
ACLYP53396 BX284668.6-201ENST00000606899 438 ntBASIC0.99□□□□□ -2.25
ACLYP53396 AC004492.1-201ENST00000607036 742 ntBASIC0.99□□□□□ -2.25
ACLYP53396 AC063944.3-201ENST00000609969 533 ntBASIC0.99□□□□□ -2.25
ACLYP53396 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.99□□□□□ -2.25
ACLYP53396 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.99□□□□□ -2.25
ACLYP53396 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.99□□□□□ -2.25
ACLYP53396 Y_RNA.167-201ENST00000363735 109 ntBASIC0.98□□□□□ -2.25
ACLYP53396 Y_RNA.582-201ENST00000391023 95 ntBASIC0.98□□□□□ -2.25
ACLYP53396 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
ACLYP53396 RN7SKP200-201ENST00000410564 320 ntBASIC0.98□□□□□ -2.25
ACLYP53396 RNA5SP504-201ENST00000410676 117 ntBASIC0.98□□□□□ -2.25
ACLYP53396 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.98□□□□□ -2.25
ACLYP53396 MRPL35P3-201ENST00000421557 364 ntBASIC0.98□□□□□ -2.25
ACLYP53396 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.98□□□□□ -2.25
ACLYP53396 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.98□□□□□ -2.25
ACLYP53396 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.98□□□□□ -2.25
ACLYP53396 SNORD116-28-201ENST00000516123 91 ntBASIC0.98□□□□□ -2.25
ACLYP53396 RNU6-1332P-201ENST00000516666 104 ntBASIC0.98□□□□□ -2.25
ACLYP53396 RNA5SP54-201ENST00000516951 92 ntBASIC0.98□□□□□ -2.25
ACLYP53396 RNU6-165P-201ENST00000517170 99 ntBASIC0.98□□□□□ -2.25
ACLYP53396 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.98□□□□□ -2.25
ACLYP53396 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.98□□□□□ -2.25
ACLYP53396 MIR4714-201ENST00000580728 77 ntBASIC0.98□□□□□ -2.25
ACLYP53396 AC008088.1-201ENST00000580993 280 ntBASIC0.98□□□□□ -2.25
ACLYP53396 AC119751.7-201ENST00000600494 245 ntBASIC0.98□□□□□ -2.25
ACLYP53396 AC022217.4-201ENST00000604389 163 ntBASIC0.98□□□□□ -2.25
ACLYP53396 AC103810.9-201ENST00000606688 112 ntBASIC0.98□□□□□ -2.25
ACLYP53396 SNORD11B-201ENST00000607707 90 ntBASIC0.98□□□□□ -2.25
ACLYP53396 AC108706.1-201ENST00000611053 297 ntBASIC0.98□□□□□ -2.25
ACLYP53396 FAM157A-202ENST00000615155 405 ntBASIC0.98□□□□□ -2.25
ACLYP53396 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
ACLYP53396 RNU1-124P-201ENST00000363861 145 ntBASIC0.97□□□□□ -2.25
ACLYP53396 RNU6-1322P-201ENST00000364309 107 ntBASIC0.97□□□□□ -2.25
ACLYP53396 SNORA69-201ENST00000383895 132 ntBASIC0.97□□□□□ -2.25
ACLYP53396 RNU6-245P-201ENST00000384020 107 ntBASIC0.97□□□□□ -2.25
ACLYP53396 RNU6-17P-201ENST00000384245 107 ntBASIC0.97□□□□□ -2.25
ACLYP53396 RNU6-18P-201ENST00000384527 107 ntBASIC0.97□□□□□ -2.25
ACLYP53396 Y_RNA.553-201ENST00000384670 102 ntBASIC0.97□□□□□ -2.25
ACLYP53396 MIR514A2-201ENST00000385131 88 ntBASIC0.97□□□□□ -2.25
ACLYP53396 MIR514A3-201ENST00000385132 88 ntBASIC0.97□□□□□ -2.25
ACLYP53396 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
ACLYP53396 AC005002.2-201ENST00000438228 269 ntBASIC0.97□□□□□ -2.25
ACLYP53396 MTND1P5-201ENST00000517906 940 ntBASIC0.97□□□□□ -2.25
ACLYP53396 AL390123.1-201ENST00000603216 237 ntBASIC0.97□□□□□ -2.25
ACLYP53396 AL133215.3-201ENST00000609801 448 ntBASIC0.97□□□□□ -2.25
ACLYP53396 MIR8054-201ENST00000620877 86 ntBASIC0.97□□□□□ -2.25
ACLYP53396 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.97□□□□□ -2.25
ACLYP53396 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms