Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RNF144AP50876 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RNF144AP50876 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RNF144AP50876 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RNF144AP50876 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.74□□□□□ -1.81
RNF144AP50876 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RNF144AP50876 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.74□□□□□ -1.81
RNF144AP50876 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RNF144AP50876 RNU6-944P-201ENST00000364023 107 ntBASIC3.74□□□□□ -1.81
RNF144AP50876 SNORA70.2-201ENST00000364506 135 ntBASIC3.74□□□□□ -1.81
RNF144AP50876 RNU1-89P-201ENST00000384592 164 ntBASIC3.74□□□□□ -1.81
RNF144AP50876 MIR181B1-201ENST00000385240 110 ntBASIC3.74□□□□□ -1.81
RNF144AP50876 RNU6-1275P-201ENST00000391087 107 ntBASIC3.74□□□□□ -1.81
RNF144AP50876 AL513477.1-202ENST00000417061 214 ntBASIC3.74□□□□□ -1.81
RNF144AP50876 PPIAP15-201ENST00000479662 484 ntBASIC3.74□□□□□ -1.81
RNF144AP50876 RN7SL604P-201ENST00000492589 296 ntBASIC3.74□□□□□ -1.81
RNF144AP50876 MRPS17P9-201ENST00000511924 393 ntBASIC3.74□□□□□ -1.81
RNF144AP50876 RNU6-109P-201ENST00000516364 107 ntBASIC3.74□□□□□ -1.81
RNF144AP50876 RNU6-184P-201ENST00000516514 107 ntBASIC3.74□□□□□ -1.81
RNF144AP50876 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.74□□□□□ -1.81
RNF144AP50876 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.74□□□□□ -1.81
RNF144AP50876 MIR7151-201ENST00000617477 60 ntBASIC3.74□□□□□ -1.81
RNF144AP50876 MIR1245B-201ENST00000636115 69 ntBASIC3.74□□□□□ -1.81
RNF144AP50876 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RNF144AP50876 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RNF144AP50876 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
RNF144AP50876 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
RNF144AP50876 LINC02471-203ENST00000641941 4752 ntBASIC3.73□□□□□ -1.81
RNF144AP50876 RNY4P6-201ENST00000363667 96 ntBASIC3.73□□□□□ -1.81
RNF144AP50876 RNU6-1274P-201ENST00000384557 107 ntBASIC3.73□□□□□ -1.81
RNF144AP50876 RNY1P7-201ENST00000384743 110 ntBASIC3.73□□□□□ -1.81
RNF144AP50876 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.73□□□□□ -1.81
RNF144AP50876 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.73□□□□□ -1.81
RNF144AP50876 AP003730.1-201ENST00000524605 285 ntBASIC3.73□□□□□ -1.81
RNF144AP50876 PARP1P2-201ENST00000556806 195 ntBASIC3.73□□□□□ -1.81
RNF144AP50876 MIR4765-201ENST00000585007 77 ntBASIC3.73□□□□□ -1.81
RNF144AP50876 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RNF144AP50876 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RNF144AP50876 RNA5SP322-201ENST00000363617 119 ntBASIC3.72□□□□□ -1.81
RNF144AP50876 Y_RNA.198-201ENST00000364013 98 ntBASIC3.72□□□□□ -1.81
RNF144AP50876 RNU6-573P-201ENST00000383938 106 ntBASIC3.72□□□□□ -1.81
RNF144AP50876 MIR590-201ENST00000385008 97 ntBASIC3.72□□□□□ -1.81
RNF144AP50876 AL031121.1-201ENST00000406553 254 ntBASIC3.72□□□□□ -1.81
RNF144AP50876 RNA5SP38-201ENST00000410750 119 ntBASIC3.72□□□□□ -1.81
RNF144AP50876 RNA5SP246-201ENST00000458909 119 ntBASIC3.72□□□□□ -1.81
RNF144AP50876 RN7SL330P-201ENST00000469709 307 ntBASIC3.72□□□□□ -1.81
RNF144AP50876 NDUFA4P2-201ENST00000489989 244 ntBASIC3.72□□□□□ -1.81
RNF144AP50876 AC006445.1-201ENST00000491925 405 ntBASIC3.72□□□□□ -1.81
RNF144AP50876 RNU6-1096P-201ENST00000517089 102 ntBASIC3.72□□□□□ -1.81
RNF144AP50876 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.72□□□□□ -1.81
RNF144AP50876 MIR6868-201ENST00000611215 58 ntBASIC3.72□□□□□ -1.81
RNF144AP50876 MIR6716-201ENST00000613413 80 ntBASIC3.72□□□□□ -1.81
RNF144AP50876 MIR8059-201ENST00000620427 81 ntBASIC3.72□□□□□ -1.81
RNF144AP50876 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.72□□□□□ -1.81
RNF144AP50876 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
RNF144AP50876 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
RNF144AP50876 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.72□□□□□ -1.81
RNF144AP50876 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
RNF144AP50876 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
RNF144AP50876 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
RNF144AP50876 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RNF144AP50876 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.71□□□□□ -1.82
RNF144AP50876 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.71□□□□□ -1.82
RNF144AP50876 MIR423-201ENST00000362201 94 ntBASIC3.71□□□□□ -1.82
RNF144AP50876 RNU6-888P-201ENST00000363010 101 ntBASIC3.71□□□□□ -1.82
RNF144AP50876 SNORD24-201ENST00000383884 75 ntBASIC3.71□□□□□ -1.82
RNF144AP50876 AL117342.1-201ENST00000404861 406 ntBASIC3.71□□□□□ -1.82
RNF144AP50876 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.71□□□□□ -1.82
RNF144AP50876 AC091390.1-201ENST00000433904 331 ntBASIC3.71□□□□□ -1.82
RNF144AP50876 AL133162.1-201ENST00000463228 453 ntBASIC3.71□□□□□ -1.82
RNF144AP50876 SNRPGP3-201ENST00000469405 227 ntBASIC3.71□□□□□ -1.82
RNF144AP50876 AC021205.2-201ENST00000480069 347 ntBASIC3.71□□□□□ -1.82
RNF144AP50876 RNU6-240P-201ENST00000516098 97 ntBASIC3.71□□□□□ -1.82
RNF144AP50876 RNU6-693P-201ENST00000516134 107 ntBASIC3.71□□□□□ -1.82
RNF144AP50876 SNORA31.21-201ENST00000517180 77 ntBASIC3.71□□□□□ -1.82
RNF144AP50876 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.71□□□□□ -1.82
RNF144AP50876 IGKV3-31-201ENST00000523109 329 ntBASIC3.71□□□□□ -1.82
RNF144AP50876 VN1R85P-201ENST00000601587 426 ntBASIC3.71□□□□□ -1.82
RNF144AP50876 MIR6867-201ENST00000610636 67 ntBASIC3.71□□□□□ -1.82
RNF144AP50876 AL591424.2-201ENST00000617023 128 ntBASIC3.71□□□□□ -1.82
RNF144AP50876 U6.98-201ENST00000637157 84 ntBASIC3.71□□□□□ -1.82
RNF144AP50876 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
RNF144AP50876 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
RNF144AP50876 Y_RNA.362-201ENST00000365518 110 ntBASIC3.7□□□□□ -1.82
RNF144AP50876 MIR759-201ENST00000390224 91 ntBASIC3.7□□□□□ -1.82
RNF144AP50876 RPL21P65-201ENST00000406094 466 ntBASIC3.7□□□□□ -1.82
RNF144AP50876 RN7SKP202-201ENST00000410439 330 ntBASIC3.7□□□□□ -1.82
RNF144AP50876 RN7SL271P-201ENST00000487601 295 ntBASIC3.7□□□□□ -1.82
RNF144AP50876 RNA5SP112-201ENST00000515937 99 ntBASIC3.7□□□□□ -1.82
RNF144AP50876 Y_RNA.666-201ENST00000516187 112 ntBASIC3.7□□□□□ -1.82
RNF144AP50876 RNU2-34P-201ENST00000516534 121 ntBASIC3.7□□□□□ -1.82
RNF144AP50876 SCARNA15-202ENST00000516881 127 ntBASIC3.7□□□□□ -1.82
RNF144AP50876 MIR5009-201ENST00000578736 100 ntBASIC3.7□□□□□ -1.82
RNF144AP50876 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.7□□□□□ -1.82
RNF144AP50876 MIR486-1-201ENST00000612171 68 ntBASIC3.7□□□□□ -1.82
RNF144AP50876 TNPO1P3-201ENST00000436471 2662 ntBASIC3.7□□□□□ -1.82
RNF144AP50876 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.69□□□□□ -1.82
RNF144AP50876 MIR372-201ENST00000362225 67 ntBASIC3.69□□□□□ -1.82
RNF144AP50876 RNU6-414P-201ENST00000363705 104 ntBASIC3.69□□□□□ -1.82
RNF144AP50876 Y_RNA.213-201ENST00000364178 111 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms