Protein–RNA interactions for Protein: P49917

LIG4, DNA ligase 4, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4P49917 Y_RNA.179-201ENST00000363844 90 ntBASIC1.85□□□□□ -2.11
LIG4P49917 RNU6-331P-201ENST00000384724 107 ntBASIC1.85□□□□□ -2.11
LIG4P49917 MIR548B-201ENST00000385247 97 ntBASIC1.85□□□□□ -2.11
LIG4P49917 RNU6-700P-201ENST00000391043 107 ntBASIC1.85□□□□□ -2.11
LIG4P49917 SNORA75.4-201ENST00000391278 119 ntBASIC1.85□□□□□ -2.11
LIG4P49917 RNU1-139P-201ENST00000391307 165 ntBASIC1.85□□□□□ -2.11
LIG4P49917 MIR190B-201ENST00000401119 79 ntBASIC1.85□□□□□ -2.11
LIG4P49917 AC138393.2-201ENST00000414742 246 ntBASIC1.85□□□□□ -2.11
LIG4P49917 AC098614.3-201ENST00000438957 440 ntBASIC1.85□□□□□ -2.11
LIG4P49917 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.85□□□□□ -2.11
LIG4P49917 Y_RNA.635-201ENST00000459041 101 ntBASIC1.85□□□□□ -2.11
LIG4P49917 AC108210.2-201ENST00000503681 201 ntBASIC1.85□□□□□ -2.11
LIG4P49917 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.85□□□□□ -2.11
LIG4P49917 RNU6-1114P-201ENST00000516022 107 ntBASIC1.85□□□□□ -2.11
LIG4P49917 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.85□□□□□ -2.11
LIG4P49917 AC012493.3-201ENST00000604494 112 ntBASIC1.85□□□□□ -2.11
LIG4P49917 MIR338-201ENST00000636369 67 ntBASIC1.85□□□□□ -2.11
LIG4P49917 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
LIG4P49917 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
LIG4P49917 MTND5P16-201ENST00000460269 1703 ntBASIC1.84□□□□□ -2.11
LIG4P49917 RNU6-1283P-201ENST00000365314 105 ntBASIC1.84□□□□□ -2.11
LIG4P49917 Y_RNA.390-201ENST00000383932 102 ntBASIC1.84□□□□□ -2.11
LIG4P49917 RNU6-296P-201ENST00000384608 107 ntBASIC1.84□□□□□ -2.11
LIG4P49917 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
LIG4P49917 RNU4-14P-201ENST00000410858 122 ntBASIC1.84□□□□□ -2.11
LIG4P49917 AC007098.1-201ENST00000420122 367 ntBASIC1.84□□□□□ -2.11
LIG4P49917 CST2P1-201ENST00000425770 87 ntBASIC1.84□□□□□ -2.11
LIG4P49917 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.84□□□□□ -2.11
LIG4P49917 HMGN2P23-201ENST00000456759 269 ntBASIC1.84□□□□□ -2.11
LIG4P49917 AC093303.1-201ENST00000514549 295 ntBASIC1.84□□□□□ -2.11
LIG4P49917 SCARNA16.2-201ENST00000516520 172 ntBASIC1.84□□□□□ -2.11
LIG4P49917 AC105029.1-201ENST00000520250 669 ntBASIC1.84□□□□□ -2.11
LIG4P49917 AK6P2-201ENST00000549020 471 ntBASIC1.84□□□□□ -2.11
LIG4P49917 AL121579.1-201ENST00000555129 305 ntBASIC1.84□□□□□ -2.11
LIG4P49917 MZT1P2-201ENST00000604387 248 ntBASIC1.84□□□□□ -2.11
LIG4P49917 AC010999.1-201ENST00000611856 324 ntBASIC1.84□□□□□ -2.11
LIG4P49917 AL669831.3-213ENST00000636676 183 ntBASIC1.84□□□□□ -2.11
LIG4P49917 snoU2-30.2-201ENST00000362805 70 ntBASIC1.83□□□□□ -2.12
LIG4P49917 U3.8-201ENST00000363675 217 ntBASIC1.83□□□□□ -2.12
LIG4P49917 SNORD48-201ENST00000364953 64 ntBASIC1.83□□□□□ -2.12
LIG4P49917 AC016909.1-201ENST00000415916 166 ntBASIC1.83□□□□□ -2.12
LIG4P49917 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.83□□□□□ -2.12
LIG4P49917 MTCYBP10-201ENST00000424905 650 ntBASIC1.83□□□□□ -2.12
LIG4P49917 AC245047.4-201ENST00000433189 144 ntBASIC1.83□□□□□ -2.12
LIG4P49917 HMGN2P34-201ENST00000437647 269 ntBASIC1.83□□□□□ -2.12
LIG4P49917 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.83□□□□□ -2.12
LIG4P49917 RNU6-221P-201ENST00000459541 99 ntBASIC1.83□□□□□ -2.12
LIG4P49917 HMGN1P12-201ENST00000499125 195 ntBASIC1.83□□□□□ -2.12
LIG4P49917 RNU6-1213P-201ENST00000517075 94 ntBASIC1.83□□□□□ -2.12
LIG4P49917 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.83□□□□□ -2.12
LIG4P49917 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.83□□□□□ -2.12
LIG4P49917 AC015712.3-201ENST00000559380 164 ntBASIC1.83□□□□□ -2.12
LIG4P49917 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.83□□□□□ -2.12
LIG4P49917 MIR3683-201ENST00000580847 82 ntBASIC1.83□□□□□ -2.12
LIG4P49917 AC005899.2-201ENST00000584353 90 ntBASIC1.83□□□□□ -2.12
LIG4P49917 AC016727.1-205ENST00000605437 569 ntBASIC1.83□□□□□ -2.12
LIG4P49917 AC010615.1-201ENST00000594254 1764 ntBASIC1.82□□□□□ -2.12
LIG4P49917 RNU6-874P-201ENST00000362390 105 ntBASIC1.82□□□□□ -2.12
LIG4P49917 RNU6-1019P-201ENST00000364424 107 ntBASIC1.82□□□□□ -2.12
LIG4P49917 RNA5SP190-201ENST00000365222 118 ntBASIC1.82□□□□□ -2.12
LIG4P49917 Y_RNA.364-201ENST00000365532 101 ntBASIC1.82□□□□□ -2.12
LIG4P49917 RNU6-439P-201ENST00000384188 106 ntBASIC1.82□□□□□ -2.12
LIG4P49917 RNU6-281P-201ENST00000384212 103 ntBASIC1.82□□□□□ -2.12
LIG4P49917 MIR520A-201ENST00000384862 85 ntBASIC1.82□□□□□ -2.12
LIG4P49917 RNA5SP213-201ENST00000391031 106 ntBASIC1.82□□□□□ -2.12
LIG4P49917 AC008134.1-201ENST00000420943 193 ntBASIC1.82□□□□□ -2.12
LIG4P49917 RPL23AP50-201ENST00000434149 455 ntBASIC1.82□□□□□ -2.12
LIG4P49917 NDUFB4P10-201ENST00000452541 359 ntBASIC1.82□□□□□ -2.12
LIG4P49917 RNU7-87P-201ENST00000459343 62 ntBASIC1.82□□□□□ -2.12
LIG4P49917 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
LIG4P49917 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.82□□□□□ -2.12
LIG4P49917 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.82□□□□□ -2.12
LIG4P49917 RNU6-1146P-201ENST00000516282 102 ntBASIC1.82□□□□□ -2.12
LIG4P49917 RNU6-307P-201ENST00000516743 106 ntBASIC1.82□□□□□ -2.12
LIG4P49917 AC025647.1-201ENST00000517879 253 ntBASIC1.82□□□□□ -2.12
LIG4P49917 AC084364.2-201ENST00000546924 395 ntBASIC1.82□□□□□ -2.12
LIG4P49917 AC093023.1-201ENST00000547375 507 ntBASIC1.82□□□□□ -2.12
LIG4P49917 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.82□□□□□ -2.12
LIG4P49917 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.82□□□□□ -2.12
LIG4P49917 AL355073.2-201ENST00000612106 557 ntBASIC1.82□□□□□ -2.12
LIG4P49917 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.82□□□□□ -2.12
LIG4P49917 AL359757.2-201ENST00000624309 274 ntBASIC1.82□□□□□ -2.12
LIG4P49917 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.82□□□□□ -2.12
LIG4P49917 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
LIG4P49917 MTND5P35-201ENST00000557537 1720 ntBASIC1.81□□□□□ -2.12
LIG4P49917 MIR1253-201ENST00000408273 105 ntBASIC1.81□□□□□ -2.12
LIG4P49917 RNU6-370P-201ENST00000411008 104 ntBASIC1.81□□□□□ -2.12
LIG4P49917 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.81□□□□□ -2.12
LIG4P49917 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.81□□□□□ -2.12
LIG4P49917 HMGB3P17-201ENST00000504195 649 ntBASIC1.81□□□□□ -2.12
LIG4P49917 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.81□□□□□ -2.12
LIG4P49917 Y_RNA.683-201ENST00000516508 93 ntBASIC1.81□□□□□ -2.12
LIG4P49917 MIR4255-201ENST00000579351 72 ntBASIC1.81□□□□□ -2.12
LIG4P49917 MIR4524B-201ENST00000581569 115 ntBASIC1.81□□□□□ -2.12
LIG4P49917 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
LIG4P49917 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
LIG4P49917 RNU6-661P-201ENST00000362409 107 ntBASIC1.8□□□□□ -2.12
LIG4P49917 Y_RNA.287-201ENST00000364853 94 ntBASIC1.8□□□□□ -2.12
LIG4P49917 RNU6-417P-201ENST00000384712 107 ntBASIC1.8□□□□□ -2.12
LIG4P49917 MIR1185-2-201ENST00000408687 86 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms